Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1413 |
Symbol | |
ID | 8596886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1491811 |
End bp | 1494231 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | virulence-associated E family protein |
Protein accession | YP_003308206 |
Protein GI | 269120029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAACA ACAGGGATAT AGTGATCAGT ACTGGTAACA GCAGAAAGTC AATAGACTGG AAAACGGAAG TAATGAAGTG GTCTGATTTT GTTAATAAAA TAAAAACACC GGTTCGTACT GATGAAACTT TAGAAGACTT TCTGGCGATG AGAAAACCGG ATCAGGATGA ATTGAAAGAC GTCGGAGGTT TTGTAGGCGG GAAGCTTAAA GAAGGTAAGA GAAGAAATGT AAATATATTA TCAAGGGACC TTGTAACTCT TGATTTGGAT AATATAGAGT CCGGGAAAAC ACAGGAAGTA TTAAAAAGAA TAAGTGGTCT TAATATCGGA TATGCCGTAT ATTCAACAAG AAAACATTCA GATTATCAGC CAAGATTAAG AGTAATTATC CCTGTTGACC GCAGTATGAC TTCTGATGAA TATGAACCGG TGGCAAGAAA ATTAGGAAAT ATGATAGGAA TAGGGCTGTG TGATCCTACC ACTTTTGAAG TAGCAAGATT GATGTTCTGG CCGAGCTGTA GTTCTGACAG TATTTATATT AACGAACATG AAGATAAGCC TTTTATAAAG GTTGACTGGG TATTATCTCA ATATAATGAC TGGAAAGATG TTACAGAGTG GCCACAAGTT CCGGGTTATG ACAAGGTTAG GGAAAATCAG GTAAAAAAGC AACAGGACCC TACTGAAAAA GGCGGAGTAA TAGGGGCTTT CTGTAAAGTA TTTAATATAT ATGAGGCAAT AGAAAGATTT ATACCTGATA GTTATGAAAT ATGTGATGTA AAAGACCGGT TAACTTATAC CGGTGGGTCA ACTTACGGCG GGGCAGTAGT CTATGATGAT AAATTTGTAT ATTCTCATCA TGCAACGGAT CCGGCAGGGC AAACTTTATG TAACGCTTTT GATTTAGTAA GACTCCATAA ATTTGGTGCT CTTGATGAAG AAGCAAAAGA ATTGACACCT AATGGAAAAT TACCGTCCTC TGTTGAGATG CGTAAACTGG CACATGGAAT TGATGAGGTT AACAATCTTA TGATGCAGGA GAAATATCAA AAAGCTGTAG ATAATTTTGA TGTAGTTGAA AACAAAGAAA TGGATACATC ATGGATAAAA CAGCTGATAA GAGATAAGAA TGGCAAGATT GAAAGTACAA TAAAAAATAT AGAAATAATA TTGGAAAATG ACCCCTACTT AAAAGGGAAA ATTACTTTAG ATGAGTTTGC TAACAGAAGT CTGGTGTTAG GAAAACTTCC TTGGGATCAT TCAGAAGTTT TTGAGCCCAG AGAGTGGGAA GATGCCGACG ACAGTGGTCT TAGAAGTTAT TTAGAAACAG TACACGGCAT AGTAGGAATG AATAAAATTT ATGATGCCTT GATGCTTGTG ACGAAAAAAT ATAAATCAAA TGAAGTAAAA GATTACCTTG AAAGTTTAGT ATGGGACGGG GTGTCCCGTC TTGAAACCTT ACTAATAGAT TATTTCGGAG TAGCTGATAA TTCTTATACA AGACAAGTTA TGAAAGTATC TTTAACAGCA GCTGTAGCAA GAGCGGTAGG AAAAGGAGTG AAGTGGGATT ATACGCCGAT AATATACGGT CCTCAGGGGA AATATAAAAC ATGGTTTTTC GAAATATTGG GTAGTAAGTG GTTTAATAAC AGCCTTGGAA ATTTTGACGG GAAAGAAGCA GCTATAACAA TTCAGGGCTC TTGGATAGTA GAACTTGGAG AACTGGCGAG TATGGCTAAA TCAGAGCTGA ATGCAATAAA ACTCTTTCTT ACCAAAAGAG AGGATATATA CAGAGAACCC TTTGGGAGAA GAACGGGAAA ACACCCAAGA AGATGTGTAT TTTTTGGAAC AACTAATGAC TGGGAATTTT TAAGGGATAG AACAGGAGAT CGAAGATTTT GGCCAGTTGT AATTTTAGAG ACTGAGCCTA CAAAAGTAGT GCCTGTAGAT TTACCAAAAG AACTGGATCA GATATGGGCA GAGGCATATT TTAACTATTC GGTAATGGGT CTTAAGCTCG ATTTAGAAGG AGACGAAGCT AAAGCCATAG CTTTAGAAAT GCAGCAACAG CATAGTGAGA GCAGTCCATT AGAAGGTATG ATAACAGAAT TTTTAGAAAA AGAAATACCA GAAGACTGGC AACGGAAAAC AGTAAAACAG AGAAGAGATT ATTTTAATAG CGGTATGGAG CCAGTTAAAG ATAATACAAA AAAATATATA AAACGAGATA GAATATGCGC CTTAGAGATA TGGAATGAAT GTTTTGGCAG AGATCCGGGA AGTTTGAAAA GATTTAATAC AAAAGAGATA AACGATATAC TTGCCAATAA TCCAGCATGG GAGAGAGGGA AAAAAGCAAT AAGATTTGGA GAGTATGGAG TGCAAAAAGG TTTTAAAAAG AAAGATGATA TCAAGAAATA A
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Protein sequence | MENNRDIVIS TGNSRKSIDW KTEVMKWSDF VNKIKTPVRT DETLEDFLAM RKPDQDELKD VGGFVGGKLK EGKRRNVNIL SRDLVTLDLD NIESGKTQEV LKRISGLNIG YAVYSTRKHS DYQPRLRVII PVDRSMTSDE YEPVARKLGN MIGIGLCDPT TFEVARLMFW PSCSSDSIYI NEHEDKPFIK VDWVLSQYND WKDVTEWPQV PGYDKVRENQ VKKQQDPTEK GGVIGAFCKV FNIYEAIERF IPDSYEICDV KDRLTYTGGS TYGGAVVYDD KFVYSHHATD PAGQTLCNAF DLVRLHKFGA LDEEAKELTP NGKLPSSVEM RKLAHGIDEV NNLMMQEKYQ KAVDNFDVVE NKEMDTSWIK QLIRDKNGKI ESTIKNIEII LENDPYLKGK ITLDEFANRS LVLGKLPWDH SEVFEPREWE DADDSGLRSY LETVHGIVGM NKIYDALMLV TKKYKSNEVK DYLESLVWDG VSRLETLLID YFGVADNSYT RQVMKVSLTA AVARAVGKGV KWDYTPIIYG PQGKYKTWFF EILGSKWFNN SLGNFDGKEA AITIQGSWIV ELGELASMAK SELNAIKLFL TKREDIYREP FGRRTGKHPR RCVFFGTTND WEFLRDRTGD RRFWPVVILE TEPTKVVPVD LPKELDQIWA EAYFNYSVMG LKLDLEGDEA KAIALEMQQQ HSESSPLEGM ITEFLEKEIP EDWQRKTVKQ RRDYFNSGME PVKDNTKKYI KRDRICALEI WNECFGRDPG SLKRFNTKEI NDILANNPAW ERGKKAIRFG EYGVQKGFKK KDDIKK
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