Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1378 |
Symbol | |
ID | 8596853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1467010 |
End bp | 1468671 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | alpha amylase catalytic region |
Protein accession | YP_003308173 |
Protein GI | 269119996 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000100533 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATT ATAAAAAGAT GAGTGTATAT CAGATTTATC CAAAAAGCTT TCAGGACAGT AATGGTGACG GAATAGGAGA TATTAACGGG ATAATCAGCA GGCTTCCTTA TATTGCAGAG CTGGGGGTAG AATATATATG GCTGACACCG ATATATATAA GTCCGGGTAA TGATAACGGA TATGATATTG CAGATTACTA TAATATAGAC CCTGTTTACG GAACAACAGA TGATTTCAAA AATCTTCTTC ATGAAACACA TAAAAGAGGG CTGAAAGTAA TGATGGACAT TGTGGTCAAT CATACGTCGA CAGAGCATAT ATGGTTCAAA GAATCATCAA AATCAGAAGA TAATCCATAC AGAAATTTTT ATATCTGGAA AAAAAATGAA GGTAAACTTC CTAACAACTG GGTATCGAAG TTTGGAGGAC CGGTCTGGAC ACTGGATGAA AGAACAGACA GCTATTATCT TCATTTATAT GATGTTACAC AAGCTGATCT AAACTGGGAA TATGAACCTA TGAGACAGGA AATATATAAA ATGATGAGAC ACTGGCTGGA TCTCGGGATT GACGGATTCC GTCTTGATGT AATAAATCTT TTGTCAAAAG ATCAGAATTT TCCTTATGAT ACTCTTAATA CTTTTACGGA TGACGGAAGA AAATATTATA CAGACGGTCC TAAAATACAT GATTATCTGA AAGAAATGAA TAAAGAAGTG TTTAGCAGAT ATAACAATGT AATAACAGTG GGAGAGATGT CTTCTACATC GCTGGAAGCA TGTATAGAAT ATACAAAGCC GGAGAGTAAA GAGCTTTCAA TGATTTTTAG CTTTCATCAT CTGAAAACAG ATTATAAAAA TAAAGATAAA TGGGAATTAC AAAAACCTGA TATCATGGAG CTTAAGGAAT ATTTTACAAA ATGGCAGAAC GGAATGGAGA AGGAAAGCGG GTGGAGTGCT TTATTCTGGT GTAATCATGA TCAGCCCCGT ATAGTGAGCC GTATGGGAAA TGAAACTGAA TACAGATATG AATCTGCCGC TATGCTTGCC ACACTTCTGC ATATGATGCA GGGAACACCT TATATTTATC AGGGGGAAGA GATCGGAATG CTGAATGCAC ATTTTGATAA AATTACTGAT TATGAAGATG TGGAATCGCT TAATGCATAT AAAAATATGA TAAATGCAGG AAAAAGTGAA GAGGAAGCAC TTAAAATTTT ACGAGAACGT TCTCGGGATA ATTCAAGAAC ACCGGTTCAG TGGGATAATA CTGAAAATTC AGGGTTCAGC ACAGGAAAAC CATGGATAAA AATGGGGAAG ATGGCAGACA GAATAAATGT TGAAGAAGAT CTAAAAAATG AAAAATCTGT ATTTTCTTAT TACAAGAAGC TGATAAATAT GAGAAAAGAA TATGATATTA TAAGAGACGG AAATTTCACA ATACTGGATG CTGATTCGGA AGATACATTT ATTTATACAC GTGAGACCGA GAGGGAAGTT CTTTATGTAA TATGTAATCT TACAGATAAA ACACTGGAAA TAGATAAAAA AATAACAGAC AGCGCAGCAG GCGGAAAGTG CCTTATTACA AATACAGATA TACCATGTGA AAAGGGTATG CTGAAACCAT ATGAAACAAG TGTCTGGCTT CTAAAAAAGT AA
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Protein sequence | MTDYKKMSVY QIYPKSFQDS NGDGIGDING IISRLPYIAE LGVEYIWLTP IYISPGNDNG YDIADYYNID PVYGTTDDFK NLLHETHKRG LKVMMDIVVN HTSTEHIWFK ESSKSEDNPY RNFYIWKKNE GKLPNNWVSK FGGPVWTLDE RTDSYYLHLY DVTQADLNWE YEPMRQEIYK MMRHWLDLGI DGFRLDVINL LSKDQNFPYD TLNTFTDDGR KYYTDGPKIH DYLKEMNKEV FSRYNNVITV GEMSSTSLEA CIEYTKPESK ELSMIFSFHH LKTDYKNKDK WELQKPDIME LKEYFTKWQN GMEKESGWSA LFWCNHDQPR IVSRMGNETE YRYESAAMLA TLLHMMQGTP YIYQGEEIGM LNAHFDKITD YEDVESLNAY KNMINAGKSE EEALKILRER SRDNSRTPVQ WDNTENSGFS TGKPWIKMGK MADRINVEED LKNEKSVFSY YKKLINMRKE YDIIRDGNFT ILDADSEDTF IYTRETEREV LYVICNLTDK TLEIDKKITD SAAGGKCLIT NTDIPCEKGM LKPYETSVWL LKK
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