Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1260 |
Symbol | |
ID | 8596738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1361194 |
End bp | 1363383 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | phage head morphogenesis protein, SPP1 gp7 family |
Protein accession | YP_003308058 |
Protein GI | 269119881 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.639278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTGGA AAAACAGAAA ACCAAGGGAA CCGTCATATA TAACAGATAA AGTATTGATA CAAAATATAG CCCGTAATGT AATAGACATA AGCAGCTTTG ATATCGAGTA TAAAAATATT TATGAAATAA GGGAACTGCA GGAGATATTT GAATATATAG ATATAAATAC TGCAGTCTCA ACTCTGGTCC GGGGAGTAAC ATCAAGAGAA TTAATATTTA CGAGTGAAAA TGGAAAAGAA GAGAATAAAA AATTAATAGA AGAGGGCCAG AAAAGAATTA ATAATATAAA GGGGAAAATG AACTTTATAA AAGAGCTGGC CAAAACACCT TTCCTTAAAA TAACAGTCCA TGAAATAATT TATAATGATA ATTTTGAGAT AGAGAGAATG GAATTTATTC CAAGAGAATT AATAAGATAT GACAAGGAAA AGAAAAAATT CTATATAGAG ACTAATGCAA CAGAGAATAT ATATCTGGAT AATCCAATGA AATGGCATGT AGCTGTATAC AATGAAAGTA TAACAAGACC CTATGGAGAA ACCATATTAA AATCCATACT TAAAACCTAT GAAGAAATAA AATATATAAA AGGAAAAATG AACGGAATAA TAGAAAAGTA TGGCGGGACA ATTGTACTAT TCGGGTATGA TCCTAATTTA GAAGATGACT TGGTAGAAAA AACAGGTTTA GAACTAAAAA GAATGATGGA TTCAAATACT GTCGGAATTC CAAGTGAAAG CGGAATAAAG GATAACATTG TATTATTGAG ACTTGCTGAT CTTAATATAG AAATTCATAC TCTGCTTATG GAAAAACTGG AAAAGAAGAT CTATCAAAAT CTACTGGGTA GCACACTTAC AGTAACAGAC GGAAGCAACG GAAAAGGAAC TCATGCTTTA GGAACTGTTC ATCAGGAAGA AAAGGAAAAA ATAGAAGATG AAATTGCCTT ATTTGTGAGA GAAGAGCTCG ATAAATTAAT AGATATAGAC GGATTAATAC ATGGTTATGA TCCTAATCAG TACTATATAG AGATAAACAG ACAAAAGGAC CGGGGAAAAG AACTTGAAAT AAAAAATCTC GAACAGGATG AAGTAAATAA GAAGGCAGAT TTGATAGTTA AATTATCACA GGCAGGTTAT GAAGTAGAGG ATAGTGAATT ACAGGAAGTA TTCGGATATA AGACACTGAA GAAAAAAGAG CAGCAACAGA TTAATAATTC GTTTTTTGAA TTCTCTAAAA AGAATACTGA GGATAGTAAT CAGAAAACAC TGGAGTATCT TGAAAGACTC AGGAAAAGAA TAATATCCGG AATAAGTGAG AAGGTAACAG AACAGATACA AAAGATAAAA ACTCCTGATG ATATAAAAAA TCTAGATACA GGAACTAAAG AACATGAGAA TGCCCTAGTA CTATCAGAGT TATGGGGACA CTATCTGACA ATAAAAGACA GGGAAAAAGT AAAGGAATAT AAAAAGAAAA GTGAATTTGC CTTTTATTCT GAAATAGATC TTCAGGATAT ATTTAATATG ACTTTCAATG AAGCTGTAAA CTGGCTGCTT GATCGTGAAC CGTTGATGTA TGATCAGATA CAGAAAGTAA TAGAGAGATA CAGGACTAAT TATTTCTGGA TAAAAAGAAG CACAGATATT GAAGTAACAA AGATATTATA TGCAGAGCTA TTAAAGAATC TTGAACTCGG CCAGACTTTT GAAGATTTTA AAAAGAATCT TGATATAGAG AGTTTAGGTC TCGGAAGTGA TGGGTATTAT CTGAAACAGG TATTTGATCA GACAATGATA AATGCTCAGG CCGTGGGACA GTGGGAACAA CTGCAGGAAG GGATACAATA TGGCTACATA TACGGTTTGT ATGATGCTGT AGTAGACGGA AGGGAAACGG CTCTTTGCAG AATGCTTGAT GGAAAGATAT ACAGGTTGGA TAGTCCGTTT TGGGAAATAT ATTATCCGCC AAATCATTTT AAATGCAGAA GCAGAGTGAT TGCACTGAGT GAAGAAGATA TGCAGACTTA CGGATATTCA GCTGAGAATA TTATTCCGGA AAACAAACCA CAGAAAGGTT TTAATAACAA TATAGGAAGT AATTATATTA CAGGAATAAA AAGATATGTA AACCAGAAAG AAAAAGAGGC TGAAATCTTA TACAAGAAGG TAAGTAACTA TGAAGGCTAA
|
Protein sequence | MFWKNRKPRE PSYITDKVLI QNIARNVIDI SSFDIEYKNI YEIRELQEIF EYIDINTAVS TLVRGVTSRE LIFTSENGKE ENKKLIEEGQ KRINNIKGKM NFIKELAKTP FLKITVHEII YNDNFEIERM EFIPRELIRY DKEKKKFYIE TNATENIYLD NPMKWHVAVY NESITRPYGE TILKSILKTY EEIKYIKGKM NGIIEKYGGT IVLFGYDPNL EDDLVEKTGL ELKRMMDSNT VGIPSESGIK DNIVLLRLAD LNIEIHTLLM EKLEKKIYQN LLGSTLTVTD GSNGKGTHAL GTVHQEEKEK IEDEIALFVR EELDKLIDID GLIHGYDPNQ YYIEINRQKD RGKELEIKNL EQDEVNKKAD LIVKLSQAGY EVEDSELQEV FGYKTLKKKE QQQINNSFFE FSKKNTEDSN QKTLEYLERL RKRIISGISE KVTEQIQKIK TPDDIKNLDT GTKEHENALV LSELWGHYLT IKDREKVKEY KKKSEFAFYS EIDLQDIFNM TFNEAVNWLL DREPLMYDQI QKVIERYRTN YFWIKRSTDI EVTKILYAEL LKNLELGQTF EDFKKNLDIE SLGLGSDGYY LKQVFDQTMI NAQAVGQWEQ LQEGIQYGYI YGLYDAVVDG RETALCRMLD GKIYRLDSPF WEIYYPPNHF KCRSRVIALS EEDMQTYGYS AENIIPENKP QKGFNNNIGS NYITGIKRYV NQKEKEAEIL YKKVSNYEG
|
| |