Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1187 |
Symbol | |
ID | 8596666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1291131 |
End bp | 1292285 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_003307986 |
Protein GI | 269119809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00200873 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTAC CTGTAAAGTA TACTTTAGAA AAAAAAGACG GAAATGCAAG AGCAGGAGTA ATAGAAACAC CTCACGGCAA GATAGAAACA CCCGTTTTTA TGCCGGTAGG TACTCAGGCT ACAGTAAAAA CAATGACAAG AGAAGAACTG GAGACTATAG AAACAGAAAT AATTCTCGGG AATACATATC ATTTATATTT AAGACCGGGA GATAAACTGA TAGATGACTT CGGAGGACTG CATAAATTCA TGAACTGGGA TAAACCCATT CTTACAGACA GCGGTGGATT TCAGGTTTTT AGTCTCGGGG ATCTGAGAAA AATAACAGAA GAAGGTGTGC ATTTCAGATC GCATATAGAC GGATCAAAGC ATTTTCTTTC GCCGGAAAAG TCGATAGATA TACAGAATAA TCTTGGAAGC GATATAATGA TGGCGCTTGA TGAGTGTCCT CCCGGGCTTT CTGCAAGGGA ATATCTGATT CCTTCTATAG AGAGAACAAC AAGATGGGCC CAGAGATGTA TAGAGGCTAA CAGAAATAAA GACAGACAGG GACTTTTTGG GATTTTTCAG GGCGGGATAT ATGAGGATCT CCGTGAGAAG AGTTTTGAAG AGCTTTATAA GATGGATGAA TACTTTTCAG GATATGCGAT AGGAGGACTG GCTGTCGGCG AGCCAAGGGA AGATATGTAC AGAATACTTG AATATATGAC GCCGAAGCTT CCTGAAAACA AACCCAGATA TCTGATGGGC GTAGGTGAGC CTGTGGATAT GCTTGAAGCA GTGGAAGACG GAGTAGATAT GATGGATTGC GTACAGCCTA CAAGGATAGG AAGGCATGGT ACGGTTTTTA CCAAGTACGG AAGACTTGTA ATAAAAAATG CCAAGTATTT CAGAGATCCA AGACCTCTTG ATGACGGCTG CGACTGTTAT GTCTGCAGAA ATTATACAAG AGCCTATATA AGACATCTGT TTAAGGCAGA GGAAATGCTG GGACAGAGAC TTACTACATA CCATAATCTT TATTTCCTTA TAAAGCTTAT GAAAGGAGCA AGAACCGCAA TTCTTGAAAA TCGTTTTCAA GAGTATAAGA ATAATTTTAT CTCAGATTAT TCGGCAGGCA GTACGCACGA ATGGATAACG GCAAAGGAAC TTTAA
|
Protein sequence | MELPVKYTLE KKDGNARAGV IETPHGKIET PVFMPVGTQA TVKTMTREEL ETIETEIILG NTYHLYLRPG DKLIDDFGGL HKFMNWDKPI LTDSGGFQVF SLGDLRKITE EGVHFRSHID GSKHFLSPEK SIDIQNNLGS DIMMALDECP PGLSAREYLI PSIERTTRWA QRCIEANRNK DRQGLFGIFQ GGIYEDLREK SFEELYKMDE YFSGYAIGGL AVGEPREDMY RILEYMTPKL PENKPRYLMG VGEPVDMLEA VEDGVDMMDC VQPTRIGRHG TVFTKYGRLV IKNAKYFRDP RPLDDGCDCY VCRNYTRAYI RHLFKAEEML GQRLTTYHNL YFLIKLMKGA RTAILENRFQ EYKNNFISDY SAGSTHEWIT AKEL
|
| |