Gene Sterm_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1119 
Symbol 
ID8596598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1225350 
End bp1226135 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content35% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003307918 
Protein GI269119741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00123252 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACA AAAGAAGAAT TTCACTTTTT TTCTTTATAT TGGTTCTGAT ATTCTTTTAT 
CTGCCTATAA TAATGCTGGT AGTACTTTCG TTTAATAATT CAAGAGGATT CAGCTGGGGC
GGATTTTCAC TGAAATGGTA CATAGAATTA TTTAGAAATT CCCCTGATTT ATGGGAGGCA
GTTTTAAGAA GTATATTAAT AGCACTTGGT TCATCGTTTT TATCAGTGGT GATTGCCACT
CTGGGAGCTA TTGCAATAAA ATGGTATAAC TTTAAAGTAA AAAAGTACGT AAAATTTATT
TCGTATATTC CATTAGTAAT ACCTGATATT ATAATGGGAA TATCGCTGGC AATATTCTTT
GCCAATATAG TAAAAGGCGG TGTGCCTTTG AGCATGTGGA CTATATTTAT AGCACATACC
ACATTTAACA TACCCTTTGC GTTATTTATA ATAATGTCAA GGCTTGACGA ATTTGATTAT
TCTGTAGTAG AGGCGGCATA TGATCTCGGG GCAAGTGAGT TTACCACACT GGTAAAGGTA
ATAATCCCTA TGATGATGCC GGGAATAATA GCCGGATTTT TAATGGCAGT AACGCTTTCC
TTTGATGATT TTGTCATAAC ATCATTTGTC TCAGGAAACG GACAGCCGAC ATTGCCTATA
TATATATATG CATCGATAAA ACGTGGAGTA TCTCCTGTGG TGAATGCATT GTCGGTAATT
TTGATAATAG GAACAATTAT ACTGACTTTT TCCAGCAGAA AATTACAGAA AAATTTGCTC
GGCTGA
 
Protein sequence
MDDKRRISLF FFILVLIFFY LPIIMLVVLS FNNSRGFSWG GFSLKWYIEL FRNSPDLWEA 
VLRSILIALG SSFLSVVIAT LGAIAIKWYN FKVKKYVKFI SYIPLVIPDI IMGISLAIFF
ANIVKGGVPL SMWTIFIAHT TFNIPFALFI IMSRLDEFDY SVVEAAYDLG ASEFTTLVKV
IIPMMMPGII AGFLMAVTLS FDDFVITSFV SGNGQPTLPI YIYASIKRGV SPVVNALSVI
LIIGTIILTF SSRKLQKNLL G