| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1118 |
|---|
| Symbol | |
|---|
| ID | 8596597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1224517 |
|---|
| End bp | 1225350 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003307917 |
|---|
| Protein GI | 269119740 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.069408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAA AAGGTGGTTT TTCTTATTAC ATTTCACTTC TTTTGTGGTT AACAGCCTTT
TTTGTTATTC CGACGCTGAT AATAGCAGTT ATCAGTTTTT TGAAAAAAGG GCCTTATGGA
GGAGTGATTT TCTGGCAGTT TAGTCTGGAT GCATATGCGA ATTTATTTGA TAAGGTATTT
TTGAAAATAA TATTCAAGAC ATTGGAAATA TCAATATGGG TAACAATTGT AACTCTTGTT
CTTGCACTGC CTACGGCATA TTATATCTCA AGATCAAAAT TAAAAAGTTT TTGGCTTCTT
TTGATAATAA TCCCGTTTTG GACTAATTTT CTGGTAAGAA TATATTCATT TATTGCAATA
CTGGGAAATA ACGGCATAGT GAATAAAGCC CTGCAGCTTG TATTTAATCT TGACGGCCCG
ATACAGCTGC TTTATAATAA AAATGCGGTA ATAATAGTAA CTGTTTATAT TTATCTGCCG
TATGCCATAC TTCCGCTTTA TTCATCAATA GAAAAATTTG ATTTTTCGCT GCTTGATGCG
GCAAGAGATC TTGGAGCTAC GAAATTTAAG GCAATGGTTA AGGTTTTTCT TCCGGGGATA
AAATCAGGGC TTATTTCGGC CATTATACTG ACATTTATTC CGGCAGTCGG TTCATATGCA
GTACCTGACC TTCTTGGCGG AAATGATGCA TTAATGCTTG GGAATATAAT AGGGAAGAGG
CTTCTTGATG CGAGAGACTG GCCTATAGCT TCTGCTGTGT CAATGCTGCT TATAGTATTT
ACCACGATTG CAGTATTGTT ATTTATGAGA TCAGATAACG GGGAGGATGA ATAA
|
|---|
| Protein sequence | MGKKGGFSYY ISLLLWLTAF FVIPTLIIAV ISFLKKGPYG GVIFWQFSLD AYANLFDKVF
LKIIFKTLEI SIWVTIVTLV LALPTAYYIS RSKLKSFWLL LIIIPFWTNF LVRIYSFIAI
LGNNGIVNKA LQLVFNLDGP IQLLYNKNAV IIVTVYIYLP YAILPLYSSI EKFDFSLLDA
ARDLGATKFK AMVKVFLPGI KSGLISAIIL TFIPAVGSYA VPDLLGGNDA LMLGNIIGKR
LLDARDWPIA SAVSMLLIVF TTIAVLLFMR SDNGEDE
|
|---|
| |