Gene Sterm_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1103 
Symbol 
ID8596582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1206970 
End bp1207920 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content39% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003307902 
Protein GI269119725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.251323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATA TAGGAATTGA TCTCGGGGGA ACAAAAATAT TAGGTGCATT ATTCGATGAT 
AACGGAACGG TAATATATAA AAATAAGAAA AAAACAAAAG CGAAGAACGG AATAAAGGCT
GTAGAGGAAC AGCTATTCTC ACTGATAGAT GATCTGACAG ATAAAAGCGG AAAAGAAGAA
ATAAAGGCAA TAGGAATAGG TGTACCGGGT CTTGTGGATG TAAAGACGGG AACCGTGAAA
TTTGCTCCCA ATATTGCAAT GAATAATTAT CCAATAGGAG ATTTGATCAG AGATAAATAT
AAAATTGATG TATTTGTAGG AAATGATGTA AATGTGGGAA CTCTGGGGGA ATGGAAATAT
TCTCCGGAAG GTAAGTCTTC GAACTTTATA GGTATTTTCG TGGGAACGGG TATAGGGGGA
GGAATTATTA TTGATAATAA GCTTTATACA GGTTCCGGAG GTGTCGCAGG GGAATTGGGA
CATATGACGA TAGATAGCAA CGGAGCTATA TGCGGGTGCG GTTCCAGAGG ATGTCTTGAA
GCCGTGGCTT CGAAAACGGG AATTCAGGCT GAAATAAAAG CCAGAATAAA AAGAGGAGAA
GATACTGATA TAAAAGAAAG CCTTGAAAAA GAAGGGATTC TAAAAAGCGG TCCGCTGAGA
GCAGCATATG ACAAAGGAGA TATAGTGGTA AGAGAAACTG TGGAAAGAGC AGCCAAGTAT
CTCGGAGTAG GTGTAGCAAA TCTGATCAAT ATATTTGATC CTGAAGCAGT AGTATTCGGG
GGAGGTGTAA TAGAGGAACT CGGTGATATT ATTCTTCCGA TTGTAAAAGA AGAAGCTTCA
CGTTATGCCA TGAGAAGTAT TTTTGAAAAT GTAAAATTTG AAAAAGCACA GCTCGGCGAT
GATGCGGGAA TAATGGGAGC TTTTGTGCTT GCACAGGAAG GTGTTAAATA A
 
Protein sequence
MNYIGIDLGG TKILGALFDD NGTVIYKNKK KTKAKNGIKA VEEQLFSLID DLTDKSGKEE 
IKAIGIGVPG LVDVKTGTVK FAPNIAMNNY PIGDLIRDKY KIDVFVGNDV NVGTLGEWKY
SPEGKSSNFI GIFVGTGIGG GIIIDNKLYT GSGGVAGELG HMTIDSNGAI CGCGSRGCLE
AVASKTGIQA EIKARIKRGE DTDIKESLEK EGILKSGPLR AAYDKGDIVV RETVERAAKY
LGVGVANLIN IFDPEAVVFG GGVIEELGDI ILPIVKEEAS RYAMRSIFEN VKFEKAQLGD
DAGIMGAFVL AQEGVK