| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1077 |
|---|
| Symbol | |
|---|
| ID | 8596556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1179465 |
|---|
| End bp | 1181051 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003307876 |
|---|
| Protein GI | 269119699 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.216808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGAA TAAATAATAT AAAAATACCT GTAAAACACT CTAAAGAAGA TGTATTAAAG
CAAGCAGCGG AAATACTGGG AGTAAGAACA GACGAAATAA AGGAATTCAA AATAACGGGA
CAGTCAATAG ATGCAAGAAA TAAGAGTAAT ATTATATATG TGTATTCTGT GGACATAATG
ATTCCTGATG AAGACAGATT TTTAGAAAAT AAAAATGTAA AAAAAACAGA GACTTTCATA
TATAAAACTG AAAAACTATC AAATATACCT GAAAAAAGGC CTGTAGTAGC AGGAAGCGGT
CCTGCGGGAA TATTTGCCGC GCTTATTCTG GCAGAAGCGG GACTGAAACC GGTTATACTT
GAAAGAGGAA AAAATGTAGA TGAAAGAAAA AAAGATGTCT ATGACTTTTT TAAAACAGGT
ATTTTGAATA CTGAATCAAA TGTACAGTTT GGTGAAGGAG GAGCCGGAAC ATTTTCGGAC
GGGAAACTTA CTACAAATAC TCATAATATC AGAATAAAAA AAGTGATAAA TGAATTTATC
GAAGCAGGCG GGGGAGAAGA ACTTGATTAT ATGTCTAAGC CTCATGTGGG AACGGACAGA
TTAATAGGAA TACTTAGAAA TATAAGGAAA AAAATAGAAG GTCTCGGCGG AGAATACAGA
TTCCAGAATA AGCTTACTTC TATAAATCAT TCGGACGGCA GACTTCAGGG GATAAAAGTC
GCAGGACCGG GCGGAGAGTA TCTGATGGAA ACGGATTATC TTATTCTTGC AGTAGGACAC
AGCGCACGGG ATACTTTTTA TATGCTTAAT GAGAAAAAAA TAGAAATGCA GCAAAAGCCG
TTTTCTGTGG GCGTAAGAAT AGAGCATAAA CAGGATATGA TAAATAAAAG CCAGTATGGA
AAACTTGCAG ACGAGCTTCC GCCGGCAGAA TATAAAATAA ATGTAAAATC ATCAAACGGA
AGAGGTGTTT ATACCTTCTG TATGTGTCCA GGCGGAGTGG TAGTTCCGGC AGCGAGTGAA
GACGGCTTTC TTGCGGTAAA CGGAATGAGC TATTATAAAA GAAACAAAGA AAATGCCAAT
TCAGCAGTGC TTGTAAATGT ATATCCTGAA GATTTCCGGG GTGATGACGT ACTTGCAGGA
GTAGAATTCC AAAGAAGGCT TGAAAAAAAA GCTTTTGAGC TCGGGGGCGG TAAATATAAA
GCACCTGTAC AGCTTGTAGG TGATTTTTTG AAAAATAAAA AATCTGAAAA ACTTGGAAAT
GTTATTCCAA GCTACAGTAT AGGATATAAA CTAAGCAACC TGAATGACTG TTTTCCAAAA
TTTATAGCAG AGTCACTTAA AGAAGGAATA CGGGAAATGG ATAAAAAAAT AAGGGGCTTT
GCCGGCTTTG ATTCTGTAAT CACGGCTGTA GAAAGCCGAA GTTCCTCACC TGTGAGAATA
TTGCGCGATG AGAAAATGTT TTCCAGTATA AAAGGTCTGA TTCCGTGCGG AGAAGGTGCC
GGTCATGCTG GCGGTATTAT TTCTGCTGCA GTAGACGGAA TAAAATGTGC TGAAGCCTTG
AATAATATAA TAAAGGAACA GCAGTAA
|
|---|
| Protein sequence | MLRINNIKIP VKHSKEDVLK QAAEILGVRT DEIKEFKITG QSIDARNKSN IIYVYSVDIM
IPDEDRFLEN KNVKKTETFI YKTEKLSNIP EKRPVVAGSG PAGIFAALIL AEAGLKPVIL
ERGKNVDERK KDVYDFFKTG ILNTESNVQF GEGGAGTFSD GKLTTNTHNI RIKKVINEFI
EAGGGEELDY MSKPHVGTDR LIGILRNIRK KIEGLGGEYR FQNKLTSINH SDGRLQGIKV
AGPGGEYLME TDYLILAVGH SARDTFYMLN EKKIEMQQKP FSVGVRIEHK QDMINKSQYG
KLADELPPAE YKINVKSSNG RGVYTFCMCP GGVVVPAASE DGFLAVNGMS YYKRNKENAN
SAVLVNVYPE DFRGDDVLAG VEFQRRLEKK AFELGGGKYK APVQLVGDFL KNKKSEKLGN
VIPSYSIGYK LSNLNDCFPK FIAESLKEGI REMDKKIRGF AGFDSVITAV ESRSSSPVRI
LRDEKMFSSI KGLIPCGEGA GHAGGIISAA VDGIKCAEAL NNIIKEQQ
|
|---|
| |