Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1059 |
Symbol | |
ID | 8596538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1140013 |
End bp | 1143084 |
Gene Length | 3072 bp |
Protein Length | 1023 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003307858 |
Protein GI | 269119681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAAACACATT GAAAAATAAA TTAGGTGTAT TAAGTTTTTT TCTCTCCGCA GCAGCAGTTC CAGAAGCAAA AAATATATAT GAAGTTTCGG GAACAGACTT TACACAGACA ATTTGGAATA ACTCGGCAGG CTCGACTCCT AAATACGGAG ATGATGTAAC TATTACAACG TCCGGTTCAG GAAATGGTGC CGGAATAGGT GCGAATGCCG GTGTTTATTC CAATATAGGC GGGGATATTA TAGTTGGTGA CAGACTTACG ATAAAGACAA TAGGAGCAGC AGCAGATGCT GTTCGTACGA ATCCTTCCGG TACTAATGAT TACAATAATT CAACAGGTGT AGTTACTATA GGGAACAATC TTACAGTAAG AGTATCCGGG GTGAGTGCCG ATGGAATAAA TGCAAACGGG CAGTCAAAGG TAGTAGTAGG AAATGACGCC GATCTAACAG TAGGAGGACT TGCAGGATAT GCAGTAAGGG CAAATCACGG CAGTGAGGTA ATTGTCGGGA ATAACATGAA AGTGGAAATA AATGCCGGCA GCTCCTATGC AGTATATACA GACAGGGCAA CTGCATCTAC TACGGGATAT ACAGGCGGTT CTTCTATAGA GATAGGAGAA AATTCAGATA TAAAAACAAC AGGGAGTTCA GCTCATGCTG TATACCTAAA TAATATAAAC AGTTCAATAT TGATGAGAGA TAACGGCACA ATACTTACGA ACGGGAATAA TTCAGACGGT TTTGTAATAA GTGCAAACGG ATCAGGCGGA ATAATCACTA TAGGAAACAA CTTTAGTGTA GAAACATTAA AAGATAAATC AGACGGAATA GTAACGGCAA AAGACGGTGC AGTGAAGACA GGAAACGATT TCAGCATAAT AACCAATGCT AATGAGTCTA CGGGAATTAC TGCCAAAGAT TCAAGCAGGA TTGAAACAGG CAGTAATACA GTAATAAATA CAAGGGGAAA CAAATCACAT GGAATATTTT TAAGCAGTAA GGATGCAGGA GTTAGTTCAA ATTCAATTTC CATAGAAACT ACAGGTGGAT TGTCAGACGG AATTCTAGTT TCTTCGGGTG GTAATGTAAC TGCAGGTATT CTTAATATAG AAACTAGTGA TCCTTCTTCA TATGGTCTTC ATTTAATCGG AGATAGTTCG AACGTTAATT CTATTTATGG CGGAAGGATT CATTCTGAAG GGACAGCAGT AAAATTTCAG ACAAATTCTG CAGGAAGTGA CGGGCAGAAA GTTACATTAA GGGGAGTAAC ATTAACAAAT AATGGAATTG CAGCAAGTGT AATAACAGGA AGTGCTTCTG ATGTAGATAA TGCAGGAAAT TTGATACAGG TTGGCGGATT AACGGCAATT AACGGAAATG CAGACCAGGT CGTAGACAGT ACTCTGAGTT TATATGACAG CACGGCAGCA GCAGGAGGAA GTAAAGAGCT GCTGAATGTA AGCAACGGAA GTATATTTAC TTTTAATAAT GATAATACAG TACTTACAGG AGATATAGAA ACAGACAGTA CCAGCTATGT AACTGTAAAT CTAAAAAATA ATTCATCATT TTCAGGTACA ATTAATAATG TAAACAATAT TAATATTCTT GACCTGAATA TAGTATCAAG TACTTGGGAA ATAACAGATG ATTCATGGAT TAGAGATCTT AATAATTCTG GGAAGGTTGT TTTTAGCGAT ACAGGGAAAA TATTAACGGT AAACGGGGAT TATATTGGGA ATAGCGGAGT TTTGAATATT AAAACAATTC TTGAAGACGA TAATTCTATC ACTGACAAAT TACATGTAAA AGGAAATACA TCCGGCGAAA CCTTGGTAAA TATAGAAAAA GCAGGCGGGA ATGGTGCAGC TACCGATGAA GGAATAAGGA TAATAGAAGT GGAAGGCAAT TCAGCAGGAA ATTTTAGTCT TTCGGCACCT GTTCAGGCAG GGATATATGA GTATAATCTT TATAAAGGCG GAGTAACTAC GCCTAATGAC GGTGACTGGT ATCTGAGATC TTATTATTAT GAGGCTCCTA AGGAGCCTGA AAAACCTGTG GATCCTGAAA AACCGGAAGA ATCAAAAGAA CCGGAAAAAG TAATTCCGCC GCCTATAAAT TCTCAGGAAC CTGTAATAAC TTACAGACCA GGAATATCCA ATTATGTATC AGGACAAAAA GCAAACGCAG AACAGGGAAT GCTCCAGCTT TCTACATATC ATCAGAGAAT GGGAAAGCAG GAAAAAGAAT ATGCAGAAGA TAAGCAGATG TGGATACGTG CTTATGGAAG CCATCAGCAT AATGACGGAA AAAAGAGATT TGATTATGAG CAGACAATTA CAGGTATGCA GTTTGGAATG GATTTGTACA ATAATGTAAA TAGCAAAAGC ACAACAGACC GTGCTGGTCT GATACTGGAT TATTCATATG CGAATGCTCG TTTTTTCGAT GATTTACGTT CTGAAAAAAA TACAGGAAGA ATGCATGCAC AAAGTACCGC TTTTGGCGGG TATTATACAA AAATAACTAA TGATTCGGCA TATTTTGATA TAGTGGGAAT AGTCGGTCTA TTAAATAACG GTTTTAAGGA TTCATACGGA GAGAAAAGTG CACAGGACGG CTGGCGAACA GGTATATCAT TGGAAACAGG ATATCCTTTT GTAAGTAATA GCGGCTGGGG GCTGGAGCCG CAGCTGCAGC TGGCATATCA GCATACACAT TACAGCAGTT TTAGTGATTC ATATTCAGAT ATAGAAGGAT ATAACGCTGA TATGTTACGT GGAAGAGGTG GCTTCAGGGT ATTTAAAGAT ATTGGAAATA ATGGGAGCCA GCTTTACGGA GTAGCAAATA TAATACATGA TTTTACAGAT TTTAAAGATT TGAAAATTGA CGGAACATCA ATTGGTGAAG AGTATGACAA GAGTTACGGG GAAGCCGGGG TAGGCTTTAA CCTAAAAACA ACAGAAAAAA GCAGTATATA CGGTGATATG CGTTATCAGA AATCCTTTGG CGGGAATATG GACAATGCGA CATTTAGTAT AGGATTTAAA AAAGAATTTT AA
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Protein sequence | MKIKNTLKNK LGVLSFFLSA AAVPEAKNIY EVSGTDFTQT IWNNSAGSTP KYGDDVTITT SGSGNGAGIG ANAGVYSNIG GDIIVGDRLT IKTIGAAADA VRTNPSGTND YNNSTGVVTI GNNLTVRVSG VSADGINANG QSKVVVGNDA DLTVGGLAGY AVRANHGSEV IVGNNMKVEI NAGSSYAVYT DRATASTTGY TGGSSIEIGE NSDIKTTGSS AHAVYLNNIN SSILMRDNGT ILTNGNNSDG FVISANGSGG IITIGNNFSV ETLKDKSDGI VTAKDGAVKT GNDFSIITNA NESTGITAKD SSRIETGSNT VINTRGNKSH GIFLSSKDAG VSSNSISIET TGGLSDGILV SSGGNVTAGI LNIETSDPSS YGLHLIGDSS NVNSIYGGRI HSEGTAVKFQ TNSAGSDGQK VTLRGVTLTN NGIAASVITG SASDVDNAGN LIQVGGLTAI NGNADQVVDS TLSLYDSTAA AGGSKELLNV SNGSIFTFNN DNTVLTGDIE TDSTSYVTVN LKNNSSFSGT INNVNNINIL DLNIVSSTWE ITDDSWIRDL NNSGKVVFSD TGKILTVNGD YIGNSGVLNI KTILEDDNSI TDKLHVKGNT SGETLVNIEK AGGNGAATDE GIRIIEVEGN SAGNFSLSAP VQAGIYEYNL YKGGVTTPND GDWYLRSYYY EAPKEPEKPV DPEKPEESKE PEKVIPPPIN SQEPVITYRP GISNYVSGQK ANAEQGMLQL STYHQRMGKQ EKEYAEDKQM WIRAYGSHQH NDGKKRFDYE QTITGMQFGM DLYNNVNSKS TTDRAGLILD YSYANARFFD DLRSEKNTGR MHAQSTAFGG YYTKITNDSA YFDIVGIVGL LNNGFKDSYG EKSAQDGWRT GISLETGYPF VSNSGWGLEP QLQLAYQHTH YSSFSDSYSD IEGYNADMLR GRGGFRVFKD IGNNGSQLYG VANIIHDFTD FKDLKIDGTS IGEEYDKSYG EAGVGFNLKT TEKSSIYGDM RYQKSFGGNM DNATFSIGFK KEF
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