Gene Sterm_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1059 
Symbol 
ID8596538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1140013 
End bp1143084 
Gene Length3072 bp 
Protein Length1023 aa 
Translation table11 
GC content38% 
IMG OID 
Productouter membrane autotransporter barrel domain protein 
Protein accessionYP_003307858 
Protein GI269119681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AAAACACATT GAAAAATAAA TTAGGTGTAT TAAGTTTTTT TCTCTCCGCA 
GCAGCAGTTC CAGAAGCAAA AAATATATAT GAAGTTTCGG GAACAGACTT TACACAGACA
ATTTGGAATA ACTCGGCAGG CTCGACTCCT AAATACGGAG ATGATGTAAC TATTACAACG
TCCGGTTCAG GAAATGGTGC CGGAATAGGT GCGAATGCCG GTGTTTATTC CAATATAGGC
GGGGATATTA TAGTTGGTGA CAGACTTACG ATAAAGACAA TAGGAGCAGC AGCAGATGCT
GTTCGTACGA ATCCTTCCGG TACTAATGAT TACAATAATT CAACAGGTGT AGTTACTATA
GGGAACAATC TTACAGTAAG AGTATCCGGG GTGAGTGCCG ATGGAATAAA TGCAAACGGG
CAGTCAAAGG TAGTAGTAGG AAATGACGCC GATCTAACAG TAGGAGGACT TGCAGGATAT
GCAGTAAGGG CAAATCACGG CAGTGAGGTA ATTGTCGGGA ATAACATGAA AGTGGAAATA
AATGCCGGCA GCTCCTATGC AGTATATACA GACAGGGCAA CTGCATCTAC TACGGGATAT
ACAGGCGGTT CTTCTATAGA GATAGGAGAA AATTCAGATA TAAAAACAAC AGGGAGTTCA
GCTCATGCTG TATACCTAAA TAATATAAAC AGTTCAATAT TGATGAGAGA TAACGGCACA
ATACTTACGA ACGGGAATAA TTCAGACGGT TTTGTAATAA GTGCAAACGG ATCAGGCGGA
ATAATCACTA TAGGAAACAA CTTTAGTGTA GAAACATTAA AAGATAAATC AGACGGAATA
GTAACGGCAA AAGACGGTGC AGTGAAGACA GGAAACGATT TCAGCATAAT AACCAATGCT
AATGAGTCTA CGGGAATTAC TGCCAAAGAT TCAAGCAGGA TTGAAACAGG CAGTAATACA
GTAATAAATA CAAGGGGAAA CAAATCACAT GGAATATTTT TAAGCAGTAA GGATGCAGGA
GTTAGTTCAA ATTCAATTTC CATAGAAACT ACAGGTGGAT TGTCAGACGG AATTCTAGTT
TCTTCGGGTG GTAATGTAAC TGCAGGTATT CTTAATATAG AAACTAGTGA TCCTTCTTCA
TATGGTCTTC ATTTAATCGG AGATAGTTCG AACGTTAATT CTATTTATGG CGGAAGGATT
CATTCTGAAG GGACAGCAGT AAAATTTCAG ACAAATTCTG CAGGAAGTGA CGGGCAGAAA
GTTACATTAA GGGGAGTAAC ATTAACAAAT AATGGAATTG CAGCAAGTGT AATAACAGGA
AGTGCTTCTG ATGTAGATAA TGCAGGAAAT TTGATACAGG TTGGCGGATT AACGGCAATT
AACGGAAATG CAGACCAGGT CGTAGACAGT ACTCTGAGTT TATATGACAG CACGGCAGCA
GCAGGAGGAA GTAAAGAGCT GCTGAATGTA AGCAACGGAA GTATATTTAC TTTTAATAAT
GATAATACAG TACTTACAGG AGATATAGAA ACAGACAGTA CCAGCTATGT AACTGTAAAT
CTAAAAAATA ATTCATCATT TTCAGGTACA ATTAATAATG TAAACAATAT TAATATTCTT
GACCTGAATA TAGTATCAAG TACTTGGGAA ATAACAGATG ATTCATGGAT TAGAGATCTT
AATAATTCTG GGAAGGTTGT TTTTAGCGAT ACAGGGAAAA TATTAACGGT AAACGGGGAT
TATATTGGGA ATAGCGGAGT TTTGAATATT AAAACAATTC TTGAAGACGA TAATTCTATC
ACTGACAAAT TACATGTAAA AGGAAATACA TCCGGCGAAA CCTTGGTAAA TATAGAAAAA
GCAGGCGGGA ATGGTGCAGC TACCGATGAA GGAATAAGGA TAATAGAAGT GGAAGGCAAT
TCAGCAGGAA ATTTTAGTCT TTCGGCACCT GTTCAGGCAG GGATATATGA GTATAATCTT
TATAAAGGCG GAGTAACTAC GCCTAATGAC GGTGACTGGT ATCTGAGATC TTATTATTAT
GAGGCTCCTA AGGAGCCTGA AAAACCTGTG GATCCTGAAA AACCGGAAGA ATCAAAAGAA
CCGGAAAAAG TAATTCCGCC GCCTATAAAT TCTCAGGAAC CTGTAATAAC TTACAGACCA
GGAATATCCA ATTATGTATC AGGACAAAAA GCAAACGCAG AACAGGGAAT GCTCCAGCTT
TCTACATATC ATCAGAGAAT GGGAAAGCAG GAAAAAGAAT ATGCAGAAGA TAAGCAGATG
TGGATACGTG CTTATGGAAG CCATCAGCAT AATGACGGAA AAAAGAGATT TGATTATGAG
CAGACAATTA CAGGTATGCA GTTTGGAATG GATTTGTACA ATAATGTAAA TAGCAAAAGC
ACAACAGACC GTGCTGGTCT GATACTGGAT TATTCATATG CGAATGCTCG TTTTTTCGAT
GATTTACGTT CTGAAAAAAA TACAGGAAGA ATGCATGCAC AAAGTACCGC TTTTGGCGGG
TATTATACAA AAATAACTAA TGATTCGGCA TATTTTGATA TAGTGGGAAT AGTCGGTCTA
TTAAATAACG GTTTTAAGGA TTCATACGGA GAGAAAAGTG CACAGGACGG CTGGCGAACA
GGTATATCAT TGGAAACAGG ATATCCTTTT GTAAGTAATA GCGGCTGGGG GCTGGAGCCG
CAGCTGCAGC TGGCATATCA GCATACACAT TACAGCAGTT TTAGTGATTC ATATTCAGAT
ATAGAAGGAT ATAACGCTGA TATGTTACGT GGAAGAGGTG GCTTCAGGGT ATTTAAAGAT
ATTGGAAATA ATGGGAGCCA GCTTTACGGA GTAGCAAATA TAATACATGA TTTTACAGAT
TTTAAAGATT TGAAAATTGA CGGAACATCA ATTGGTGAAG AGTATGACAA GAGTTACGGG
GAAGCCGGGG TAGGCTTTAA CCTAAAAACA ACAGAAAAAA GCAGTATATA CGGTGATATG
CGTTATCAGA AATCCTTTGG CGGGAATATG GACAATGCGA CATTTAGTAT AGGATTTAAA
AAAGAATTTT AA
 
Protein sequence
MKIKNTLKNK LGVLSFFLSA AAVPEAKNIY EVSGTDFTQT IWNNSAGSTP KYGDDVTITT 
SGSGNGAGIG ANAGVYSNIG GDIIVGDRLT IKTIGAAADA VRTNPSGTND YNNSTGVVTI
GNNLTVRVSG VSADGINANG QSKVVVGNDA DLTVGGLAGY AVRANHGSEV IVGNNMKVEI
NAGSSYAVYT DRATASTTGY TGGSSIEIGE NSDIKTTGSS AHAVYLNNIN SSILMRDNGT
ILTNGNNSDG FVISANGSGG IITIGNNFSV ETLKDKSDGI VTAKDGAVKT GNDFSIITNA
NESTGITAKD SSRIETGSNT VINTRGNKSH GIFLSSKDAG VSSNSISIET TGGLSDGILV
SSGGNVTAGI LNIETSDPSS YGLHLIGDSS NVNSIYGGRI HSEGTAVKFQ TNSAGSDGQK
VTLRGVTLTN NGIAASVITG SASDVDNAGN LIQVGGLTAI NGNADQVVDS TLSLYDSTAA
AGGSKELLNV SNGSIFTFNN DNTVLTGDIE TDSTSYVTVN LKNNSSFSGT INNVNNINIL
DLNIVSSTWE ITDDSWIRDL NNSGKVVFSD TGKILTVNGD YIGNSGVLNI KTILEDDNSI
TDKLHVKGNT SGETLVNIEK AGGNGAATDE GIRIIEVEGN SAGNFSLSAP VQAGIYEYNL
YKGGVTTPND GDWYLRSYYY EAPKEPEKPV DPEKPEESKE PEKVIPPPIN SQEPVITYRP
GISNYVSGQK ANAEQGMLQL STYHQRMGKQ EKEYAEDKQM WIRAYGSHQH NDGKKRFDYE
QTITGMQFGM DLYNNVNSKS TTDRAGLILD YSYANARFFD DLRSEKNTGR MHAQSTAFGG
YYTKITNDSA YFDIVGIVGL LNNGFKDSYG EKSAQDGWRT GISLETGYPF VSNSGWGLEP
QLQLAYQHTH YSSFSDSYSD IEGYNADMLR GRGGFRVFKD IGNNGSQLYG VANIIHDFTD
FKDLKIDGTS IGEEYDKSYG EAGVGFNLKT TEKSSIYGDM RYQKSFGGNM DNATFSIGFK
KEF