Gene Sterm_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1027 
Symbol 
ID8596506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1112187 
End bp1113164 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content40% 
IMG OID 
ProductPorphobilinogen synthase 
Protein accessionYP_003307826 
Protein GI269119649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0739722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA GACACAGAAG GCTCAGAGTA AATAAAAATA TGAGAAATCT GGTAAGAGAT 
GTGTATCTGG ATGCGGATGA CCTTGTATAT CCGCTGTTTA TAGAAGAAGG AACTGATATA
AAAAGTGAGA TTCCTTCTAT GCCCGGTATA TACAGATATT CTGTGGACAG GCTGAAAGAG
GAGCTTGACG AGGTACAGTC TTTGGGAATA AAGACGCTTC TCCTTTTCGG AATTCCAAAG
CATAAGGATA ATACTGCAAG CGAAGCATAT AATGAGCATG GAATAGTACA GGAGGCTGTA
AGGTATATAA AAAAAGAATA TCCTGATTTT CTTGTAATAA CAGATGTATG CAACTGTGAG
TATACAGATC ACGGGCATTG CGGAATACTG GACGAAAATG GTTATGTATT AAATGATGTA
ACACTGGAGC TTCTGGGGAA AACAGCAGTT TCTCATGCTA AGGCAGGTGC GGATATCATA
GCTCCTTCGG ATATGATGGA CGGAAGAATA GAGAAAATAA GAGAAGAGCT GGATAAAAAC
GGTTTTGAAA ATATACCTGT AATGTCTTAT GCAGTAAAGT TTTCATCGGC TTTTTACGGA
CCGTTCAGAG ATGCAGCAGA TTCAGCGCCG AAATTTGGTG ACAGAAAATC CTATCAGATG
GATTACAGGG CAGAATTTGA CGTGTTAAGC GAAGCCTGCG AGGATATAAA GCAGGGAGCA
GATATGATAA TAGTAAAGCC TGCTCTGGCA TACCTTGATT TAATCGCAAA AATAAAAAGA
GAATGTAATG TACCTATAGT GGCATACAGC GTGAGCGGTG AGTATTCAAT GGTAAAGGCA
GCGGCACAAA ACGGCTGGAT AGATGAAAAA GGCGTGGTAA TGGAAAAGAT ATATGCTATG
AAGAGGGCAG GGGCAGGTAT TATAATTACA TATTATGCAA AAGACATAGC AGAATGGCTC
AGAGAGGAAA AAAAATGA
 
Protein sequence
MFKRHRRLRV NKNMRNLVRD VYLDADDLVY PLFIEEGTDI KSEIPSMPGI YRYSVDRLKE 
ELDEVQSLGI KTLLLFGIPK HKDNTASEAY NEHGIVQEAV RYIKKEYPDF LVITDVCNCE
YTDHGHCGIL DENGYVLNDV TLELLGKTAV SHAKAGADII APSDMMDGRI EKIREELDKN
GFENIPVMSY AVKFSSAFYG PFRDAADSAP KFGDRKSYQM DYRAEFDVLS EACEDIKQGA
DMIIVKPALA YLDLIAKIKR ECNVPIVAYS VSGEYSMVKA AAQNGWIDEK GVVMEKIYAM
KRAGAGIIIT YYAKDIAEWL REEKK