Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1027 |
Symbol | |
ID | 8596506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1112187 |
End bp | 1113164 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | Porphobilinogen synthase |
Protein accession | YP_003307826 |
Protein GI | 269119649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0739722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA GACACAGAAG GCTCAGAGTA AATAAAAATA TGAGAAATCT GGTAAGAGAT GTGTATCTGG ATGCGGATGA CCTTGTATAT CCGCTGTTTA TAGAAGAAGG AACTGATATA AAAAGTGAGA TTCCTTCTAT GCCCGGTATA TACAGATATT CTGTGGACAG GCTGAAAGAG GAGCTTGACG AGGTACAGTC TTTGGGAATA AAGACGCTTC TCCTTTTCGG AATTCCAAAG CATAAGGATA ATACTGCAAG CGAAGCATAT AATGAGCATG GAATAGTACA GGAGGCTGTA AGGTATATAA AAAAAGAATA TCCTGATTTT CTTGTAATAA CAGATGTATG CAACTGTGAG TATACAGATC ACGGGCATTG CGGAATACTG GACGAAAATG GTTATGTATT AAATGATGTA ACACTGGAGC TTCTGGGGAA AACAGCAGTT TCTCATGCTA AGGCAGGTGC GGATATCATA GCTCCTTCGG ATATGATGGA CGGAAGAATA GAGAAAATAA GAGAAGAGCT GGATAAAAAC GGTTTTGAAA ATATACCTGT AATGTCTTAT GCAGTAAAGT TTTCATCGGC TTTTTACGGA CCGTTCAGAG ATGCAGCAGA TTCAGCGCCG AAATTTGGTG ACAGAAAATC CTATCAGATG GATTACAGGG CAGAATTTGA CGTGTTAAGC GAAGCCTGCG AGGATATAAA GCAGGGAGCA GATATGATAA TAGTAAAGCC TGCTCTGGCA TACCTTGATT TAATCGCAAA AATAAAAAGA GAATGTAATG TACCTATAGT GGCATACAGC GTGAGCGGTG AGTATTCAAT GGTAAAGGCA GCGGCACAAA ACGGCTGGAT AGATGAAAAA GGCGTGGTAA TGGAAAAGAT ATATGCTATG AAGAGGGCAG GGGCAGGTAT TATAATTACA TATTATGCAA AAGACATAGC AGAATGGCTC AGAGAGGAAA AAAAATGA
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Protein sequence | MFKRHRRLRV NKNMRNLVRD VYLDADDLVY PLFIEEGTDI KSEIPSMPGI YRYSVDRLKE ELDEVQSLGI KTLLLFGIPK HKDNTASEAY NEHGIVQEAV RYIKKEYPDF LVITDVCNCE YTDHGHCGIL DENGYVLNDV TLELLGKTAV SHAKAGADII APSDMMDGRI EKIREELDKN GFENIPVMSY AVKFSSAFYG PFRDAADSAP KFGDRKSYQM DYRAEFDVLS EACEDIKQGA DMIIVKPALA YLDLIAKIKR ECNVPIVAYS VSGEYSMVKA AAQNGWIDEK GVVMEKIYAM KRAGAGIIIT YYAKDIAEWL REEKK
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