Gene Sterm_1003 details

Gene Information

• Locus tag: Sterm_1003
• ID: 8596482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1090357
• End bp: 1091067
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 39%
• Product: cobalamin biosynthesis protein CbiM
• Protein accession: YP_003307802
• Protein GI: 269119625

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATA AAAGTAGAAT ATATTTAATT GCATCAGCAT TTTTAATATT ATCAGTGAGC 
AGTTATTCAA TGCATATTAT GGAAGGATAT CTGCCGGTAA AATGGGCAGT ATTCTGGTTT 
ATTCTTTGTG CTCCGTTCTG GATTTACGGA CTTGTAAAAT TACAGAAAGA AGCAAAAGGT 
AACGTGGAAG AAAAATTGAC ACTGGCACTT GCAGGAGCGT TTATTTTTGT TCTTTCCGCA 
TTAAAAATAC CGTCAGTAAC AGGAAGCTCG TCACATCCTA CAGGTGTAGG ACTGTCTGCA 
ATATTATTCG GACCGTTTAT TACATCAATA CTGGGAACTA TAGCACTTAT ATTTCAGGCA 
GTGCTGCTTG CACACGGAGG GCTTACCACA CTCGGGGCAA ATGCATTTTC CATGGCAGTG 
GCGGGACCTT TGGTGTCATA TGGTATCTAC AGACTTCTGA AAAAAAAGAA TAAATCTCTT 
GCTGTATTTC TTGCGGCTTC ACTGGGAAAC CTGAGTACAT ATGTAATAAC TTCTTTCCAG 
CTGGCACTTG CGAATCCATC GGCAGACGGG GGAATAACAG CATCATTTGT GAAATTTGCC 
ATGATATTTG CCGTGACACA GATTCCTTTG GCAGTAATAG AAGGACTTCT GACTAACGTA 
GTAATGAATT TACTTGAAAA ATATAATATA AAGCAAGGGG TGAAGGCATA A 

 

Protein sequence

MKNKSRIYLI ASAFLILSVS SYSMHIMEGY LPVKWAVFWF ILCAPFWIYG LVKLQKEAKG 
NVEEKLTLAL AGAFIFVLSA LKIPSVTGSS SHPTGVGLSA ILFGPFITSI LGTIALIFQA 
VLLAHGGLTT LGANAFSMAV AGPLVSYGIY RLLKKKNKSL AVFLAASLGN LSTYVITSFQ 
LALANPSADG GITASFVKFA MIFAVTQIPL AVIEGLLTNV VMNLLEKYNI KQGVKA