| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0988 |
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| Symbol | |
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| ID | 8596467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sebaldella termitidis ATCC 33386 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013517 |
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| Strand | + |
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| Start bp | 1063730 |
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| End bp | 1070542 |
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| Gene Length | 6813 bp |
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| Protein Length | 2270 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_003307787 |
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| Protein GI | 269119610 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAG ATAAAAAATT ATTATTATCA TTTCTGGCGT TAAATACTGT ACTATCCGGA
TATGCCGTGA GTGCGGGGAA AACTGTAGCA TTAAACAGTG ATAGATTATA TAATAATATG
ATAAAAAATC TGGAACAGGG GAAAACAAAC GAAGAAAATT ACAAGCTTAT AGAAAAAGTA
TTAAACCAGC GAAATAAAGA ATTAAAAGAT CTGTATTTAC AGAGTGACTA TATTGTAAAA
CCTGAATATC TGGAATGGCA GATTTTTGCC AGTGCATTTT ATGAAGAACA CGGAAAGGGT
GTAGATAATA CCAAAGAAAA TGCAAAATAT CGTTCACAGG TATCAGGATA CTATGATGAC
AGCGGAAATT TTGTGACAAC AAGCGGATCA ATAAACGGAG TGGACGGAAA ACCTTATCAG
CCGCCACAGC AGCCTAAAAA TATAAATTTA GGGGTCAGCA TTCCTATGAA GGGAATGACC
AGAGAGCCAT TAAATCTAAA CATAACACCG GCAAGCGAAA TTAATATTAA TCCTGCCGGA
TATAATTTTA ACATACCTTC AGGAGCAACA ATCCCGCAGA TAAATGTAAT AGAATTTCAG
CCGATAGCAC CTGATCTGAC AGCACCCACA CCTATTACGG TAAATCCGCT GAGCTTGTCA
TTCCCGGGAA GTGGTAACGG GGATAGTACA TGGTTTGGAT TAACTGCGAA TAATGCACCT
ATAAAACAAC AGTCAATGAC AGGAATAAGC GGAACAGGAA CTTTTGAGAC ATTGTTTACC
GGTGCAAATA ATATAAGACA GTATATAGAC AATACTTTAA TGCAGGGATA TGCAGGTGGT
CACACAGCTA CTTCAGGAAT TTCACATCCT GAAAATAATT ATAAATTTAG CGGAACAGCT
ACATTTGGAA GTATGCTTCT GGTAGGTGGG GAATATATTC CGATAAATAA CATGAATTTG
ACAGCTATGA AATTAGCCGG AGCTAATAAT CTGGCAGTTT TCCACACAGA TTCACACAAT
GATTTCGGGA CTTCACTATG GGATTTGAAT AATACAAATG TTACTATGAA AGGTGAAAAA
ACAATATTAT ATGATGTTCA ATATCATGGG ACTAACGGTG ATTCCGGTAT GGTATTTAAT
AATGGAACAA TATTAGCAGA TAATACTACA TCTTATACTT CATTGTATGA CGGAGCAGTA
TATAATTATA GTCCTGAAAA GAGATTTGTT TTTGTTTCCA TTGCTGACGG CGGAGGTACT
TCAAGATATC TTTATTTTAA AAATGAAGCT GGCGGAAAAA TTTATCTAAA TGGAAAAGAA
GACGTTCTTT CTAACTTTGC AGCTGAAGAT AATGCAAATT ATGGAGGGTC ATATTTTGAA
AATAGAGGAA CAATTGAACT GAACGGAATA AAGTCCATGG GGGCAGTATT TGCCAGAGAG
TATACCAGAT CTTGGGTTAG ATTTGAAGAG GCTCTGAGCT TAAACGGTGA TAAGAGTGTG
GGAGTTGCAT TTACATATAA CTTTAATACT AATGCGACTA ATGGTGCCGG AGCAGCACCA
GTACTTAATG CAAACTATGA AACCTCACCG GTAAAAGATT CAGTATTTAA TATAAAGATC
GGAGAAAAAT CAAATCCCAG CAATGCAGAT TCAAATGACA CTTCTATAGC AGGAAGTACT
ACAGCTCTGG TAGAAGAGGC AACAGCACTG TATTTTAATA ACGGAAGCGG AACTAGAAAA
GATTATAAAA TAATGCATGC ACAGCTTGAT GCATTAGAAA ATGCTAAAAG AGCAACATTG
GTATCAATAG TAAGAGGAAA GGTAATATTA GACGGGACTG ATACGGCAAA CAGACTGAAA
ATAGACGGCG GGACTTCAAA AACAGGAATA AATAATATAG CAATATATGC AGGAGCTACC
GGAACTCCAG GCTCTACACA GTCAGAAATA GAGAGCTATA TTCCGTTAAC TATAACAAAT
TCTGATTTAT CAACAGCTAT TTTTGGTGAA AAGAAGGCGG TAATAACAAA TAACGGTGAT
ATTACTATAT CCGGCAGTAA CGGAGTAAAA GGAATAATAA TAGACAGCGG TGCTCAGGCA
ACAATAGGAG GAAATATAAC ACTTGCCAAC GGAGGAGTGT ATACGGATTC AGCGAATGTA
AAAACCGGTT CAGTGGTGCT AGGTGTGATG AACGGATCTA TGCTGACAAG TACCGGAATT
ATAACAGCTG ATGTCCATGG TAAGGAATCA ATAGCAGTTT ATGCTGACAG CTCGGTAGTA
ACTATGACGA ATGCAGGCTC AAGCATAAAA GCATTGGACG GAGCTTTTGC AATGACAGCT
GTCAATGGCG GAAGCATCAA ATATGACGGT AACTATATAG AAGCGGGACA AAAGTCACTG
TTGTTTTATC TCGATAATAC CGGGGAGATA AGAATAACAT CACCAGCAAC TGCAAAAGTA
ACCGGAGCTT CAAATGCCAC AGACAGAGGA ACAGCATTTT ATTATAAATC TCCTACAGCA
TATGGAACAT TTAATTCAAG TGATATTTCC TCATATTTTA CAAATAGATA TAATTCTACT
TTAGGAAATC TGACATTAAA TATGGATCCA GGTTCAAGAT TGTTTATTGT GGACAATGTA
GCGATGAACT TGTCAAGTAC CAATGTATCA ATGGGGTCTG TGCTAAATGC ACCGATAATA
AACGGAAGCT CATATAAAAC ATTTATGCTG TATCAGAGTG ATTTGACAAT AGATAAAGCA
ATAAATCTTG ATTCAGCCAC AGATGACTAT AACAATCTGG AAATAGTAAC TTCAAAAATA
ACAAACAACG GATTTAATAT AACAGGGACT GCAGCGGGTC AGGCCGGAAT GGCCCAGGAA
AACGGGCTTG ATATGACATC AACGCCATTA GCCAGATCAA CTGTGACTTT AACAAATAAC
AACGGAGTAA TTTCTCTCGG CGGAGCCAAT TCAATAGGAA TATACACAAG CAACGGGGAA
ATTTATAATA ATGGTACAGG AAAAATAAAC ACAACAGGTG ATAATTCAAT CGCTATTTAT
GCAGTAAATG GTACTAAAGT GGATACAGCA GCAGGAACTG AAATAAATAT AGGGAAAAAT
GGAGTAGGAA TATTTGCAGA GGGCTATAAA CAGGGGACAG CGCAGGTTTT TGGAAACGGC
GAGCTTGATA TAAAAAACAG CGGATTGATA AAATCAGGAA CTGGAACTAA TGCAATAGGG
ATTTACCTGA ATAATAACTC AGGAGTGGCA ATTGGTAATT CAAAACTTAA TTTATCAAAC
GGAATTGTAG ATATGAGTGC TTCTGAGGGT GGAGTAGGTG TTTATGTAGA TAAAGGAACT
GTAACTGATT CCGGCTCTAC AATAACTGTA GGTAAAAACG GTGTAGCTCT TTATGCTAAA
GACAGCAGTG TAACACTTGC AGGTTCTACA ATTAATTTAT TAGGTGATAA TGCATTGGGA
CTTTATCTTG ACGGCACAAC AAGCTTTAAC GGAACAGGGA ACATAAATAT AAGCGGACAG
AATATAGTTT TATTTAATAT GAATTCAAGC GGGTCAATCT CAAATAATTT TAATGTGGCA
AATGTGGCTC CCGGCTCTAC ATATACTCTG GGAAATATCA CAGGAGGAGC ATTTGAATAC
ACAGGAATCA GTAATCTGGC TACAAATGGG ACACTTGTTT CGGGAACAAA TTCTGCTATA
TATCTAAACG GATCTGTTAT AACTTCAGCA GCAGGTGCAA CAAATATAGC TGCCGCAGTT
CTTAACGGGC AGTATACAGG AACAGTACCG GCTGGTATGA CAGCAGGAAC TGACGGAGAA
AACAACGGAA CGATTACTTT GGGAGATAGT TCAGTAGGAT TATTCGGTAA AAACGGATCA
AGAGTGAGCA ATAAAGGGGT AATAACAGCA GGTAATGCAT CAGCAGGCTT AATGACATCA
GGAGCAGGTT CACTGGCAAT GAACAGCGGA GCAATAAATC TGGGAGCAGG TTCACAGGGA
ATGGTTCTGA AAAACGGAAC AACTATAGAT AACTTAGGAA CAGGAAATAT ATTAAGCAGC
GGTGCAGGAA CTGTAGGGAT ATTTGCTGAT AATATTACAG GGAATATAAA TAATGCCGGG
GCAGTTGATC TTAGCGGTGA TAAATCAATA GGAATATATT CGGCAGGATC AAATGCCGTA
ACTATAAATA ATACAGGAAC AGTAAAAGTA GGGAATTCAT CAAATGTTTC CGACCCTTCA
ATAGGGATAT ACAGCGGAAT AGCTGGAAAT ACAGTAACCA ATTCGGGAAC TGTAACTGCC
GGTGATAATT CAATAGGGAT ATACAGCAAT ACAGGAACTG TTAACAGCAG CGGAATAATG
AACATCGGAA ATGCAGGTGT GGGAGTATAC GGAACAAATG CAGTAATTAA TCTAAATTCG
GGAACAATAA ATATAGGGAC AAACGGAGCA GTAGGAGTAT ATGCTGAAAG CTCTGCGGTA
ACTAATTCAT TAAGCTTTGA TGCAGGAAGT CATAACTATG GTTTTATACT AACAGGCGGA
TCATTCACGA ATAATGCGGG AACAAACAGC GTTATAGGTA CAGATTCTGT ATTTATGTAC
AGTCAGCAGG GAACAGCAGT AACAAATAAC GGAAATCTTA CAATGACAGG ATCGGATAAT
GTCGGTTTCT ATCTTGATAA GGATTCAAAT TATGTCGGCG GAGCTGTAAT TACTAATAAC
GGAACTATAA CAGGAACAGC GGGGAATAAT AATGTCGGAA TCTATAATTA CGGCGGAACA
ATTGATAACT ACGGAACTGT AGCTGTAGGA GGTTCAGATA TTGTAATTTC CAAAGGAGTG
GTAGACAGTG ATAAGAGTAA ATATGCAGTG GGATTATACG GAGAAAATGC TGCAATCATA
AATCATTCAG GAGCAACAGT AACAGCAGGT TACGGCGGAT ACGGAATAGT AGCCAAGGGC
GGAACAGGAA GCAACTACGG TACGGTAACA ACAAACGGAG ATTATTCAGT AGGAATGTAT
ACAGAAAATG GAACAGTAAC CAATGAATCT GGCGGAGTAA TTAATGTAAC AGGCGACAAT
GCAATAGGTA TGGGAGGAAA AGGAACAAAC TCATTTATTA CGAATCATGG TACTATAAAT
ATAACAGGTA ATGATGCAAT AGGAATGTAT GCTAATCCCG GAACAATAAT AACAAATACA
GGTACTATAA ATATAACAGG AAACGGTCAG GCATTCGTAT CTTCGGATCC TGATGATCCT
GCTCATAGTG TAAACAGCGG AAGTGCCACA ATAAATGGAG TATCAGATAA TGTAATTCAG
GGATTGGGAA ATACTTATGC GATACCGACG CTGATAAATG CAGGAATAAT CAAAACAACA
GGAGTATTGG CACTGGACGG GATTCAGGTA TTAATCAAGA CTGATCTATC TACAAGACAG
GCATCATCAG ATCCTAATTA TGATTTCGTA ATATCGGGAA CTTCAATAAC AGCTGATGAA
ATACTGACAA CAAAGCCTAT AGTAATAATG CCCGGCTTTG CAGACGGAAC AAATGCAGAT
GTTTATAAAC TGGAAGGATT AATTAAGGCA AATTCAGGAA AATATGACTT CATAAGCGGA
TCGCTTCTGT GGGAAGCAAC ACCGAAAGTA ACATCAACAG GCGCAGATAT TTATATGTCA
AGAAAAGCAT TTACAGACTT TACAGACGGA CTGTGGTTTG AAGACTTCGG GACAGCACTG
GAAAATAATT ATGCTGCTGC CACAGGAGAT GGAGTAAAAA TATACAATAA AACCGGCTAT
ATAGCAGACG AAGAAAGCTT CAGACATATA ATGGCGAGTC TTGCAGGAAA TGTATATGCC
AATATAAATC AGAGAGAGAA TGATATAGCA AATGCATTTG AAAACTCATT ACATTTGATG
CAGAATTCAA CAAATAACAC AAAAGAAAAT GTAAAAGTAA ATATAATAGC AGGAAAAGGG
AAAAACAAAG AAGAAACAGA CGGGGTAACG AGTTATGATT ATACAACAAC AGGGGTACTG
GCATTAAGAG AAGTGGAAAG AACTTACAGA CATACATTCG GTTACTCACT TGGGTACTTA
CATACAGGCT TTGAATTCAA TGACGGGAAC GAGAGTGAAG AATGGGTAGA TACAATCCAG
CTTGGAGTGC ATAATAAATA TGATGCGAAC AGCTGGCAGC TGAGAAATGA TCTTACAGGA
AGAGTAAGTT TCCATAATGT AGACAGAAAT ATAGACTGGC CATCACCGCT TGGAAGATCA
GAAATGAACG GAACTTATGA GACATACAGC ATAACAAGTG ACAATATACT TGGAAAAGAA
TTCGGATTAG GAAAGAGAGC AAGTATAATG CCATATGGAG CATTCAGAGC AATGTATGTG
ACAAGACCGA CATTTAATGA AAGCGGACTG GAAGCCCTTG AGGTGGAAGG GAATGATGCA
TGGAGTGCAA AGCCGAGAGC AGGAGTGGAA CTAAAAGGCT CATTACCTTT AGGAAGCAAG
ACAGCATGGC AGTTAAAAGG AGCATTGGAT GTAGCTTATG AATATGAGCT TGCGGATTTG
AACGAAAGAG AAAAGGCAAG ATTAATAGCC ATAGAGGATG GTTATCATAA ACTGTCAAAG
CCACAGGATG AAGAGGGAAT ATTCAGAACA AGAGCTTCAT TAGGAGTAGA GGTGGAAGAC
AGATACGGAA TATTCCTGAC AGGAGAATAC TCAACAGGAA ATAATAAGGA AAATGATTAC
AGAGCAGGAG TAGTATTCAA GGCAGTGTTT TAA
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| Protein sequence | MRRDKKLLLS FLALNTVLSG YAVSAGKTVA LNSDRLYNNM IKNLEQGKTN EENYKLIEKV
LNQRNKELKD LYLQSDYIVK PEYLEWQIFA SAFYEEHGKG VDNTKENAKY RSQVSGYYDD
SGNFVTTSGS INGVDGKPYQ PPQQPKNINL GVSIPMKGMT REPLNLNITP ASEININPAG
YNFNIPSGAT IPQINVIEFQ PIAPDLTAPT PITVNPLSLS FPGSGNGDST WFGLTANNAP
IKQQSMTGIS GTGTFETLFT GANNIRQYID NTLMQGYAGG HTATSGISHP ENNYKFSGTA
TFGSMLLVGG EYIPINNMNL TAMKLAGANN LAVFHTDSHN DFGTSLWDLN NTNVTMKGEK
TILYDVQYHG TNGDSGMVFN NGTILADNTT SYTSLYDGAV YNYSPEKRFV FVSIADGGGT
SRYLYFKNEA GGKIYLNGKE DVLSNFAAED NANYGGSYFE NRGTIELNGI KSMGAVFARE
YTRSWVRFEE ALSLNGDKSV GVAFTYNFNT NATNGAGAAP VLNANYETSP VKDSVFNIKI
GEKSNPSNAD SNDTSIAGST TALVEEATAL YFNNGSGTRK DYKIMHAQLD ALENAKRATL
VSIVRGKVIL DGTDTANRLK IDGGTSKTGI NNIAIYAGAT GTPGSTQSEI ESYIPLTITN
SDLSTAIFGE KKAVITNNGD ITISGSNGVK GIIIDSGAQA TIGGNITLAN GGVYTDSANV
KTGSVVLGVM NGSMLTSTGI ITADVHGKES IAVYADSSVV TMTNAGSSIK ALDGAFAMTA
VNGGSIKYDG NYIEAGQKSL LFYLDNTGEI RITSPATAKV TGASNATDRG TAFYYKSPTA
YGTFNSSDIS SYFTNRYNST LGNLTLNMDP GSRLFIVDNV AMNLSSTNVS MGSVLNAPII
NGSSYKTFML YQSDLTIDKA INLDSATDDY NNLEIVTSKI TNNGFNITGT AAGQAGMAQE
NGLDMTSTPL ARSTVTLTNN NGVISLGGAN SIGIYTSNGE IYNNGTGKIN TTGDNSIAIY
AVNGTKVDTA AGTEINIGKN GVGIFAEGYK QGTAQVFGNG ELDIKNSGLI KSGTGTNAIG
IYLNNNSGVA IGNSKLNLSN GIVDMSASEG GVGVYVDKGT VTDSGSTITV GKNGVALYAK
DSSVTLAGST INLLGDNALG LYLDGTTSFN GTGNINISGQ NIVLFNMNSS GSISNNFNVA
NVAPGSTYTL GNITGGAFEY TGISNLATNG TLVSGTNSAI YLNGSVITSA AGATNIAAAV
LNGQYTGTVP AGMTAGTDGE NNGTITLGDS SVGLFGKNGS RVSNKGVITA GNASAGLMTS
GAGSLAMNSG AINLGAGSQG MVLKNGTTID NLGTGNILSS GAGTVGIFAD NITGNINNAG
AVDLSGDKSI GIYSAGSNAV TINNTGTVKV GNSSNVSDPS IGIYSGIAGN TVTNSGTVTA
GDNSIGIYSN TGTVNSSGIM NIGNAGVGVY GTNAVINLNS GTINIGTNGA VGVYAESSAV
TNSLSFDAGS HNYGFILTGG SFTNNAGTNS VIGTDSVFMY SQQGTAVTNN GNLTMTGSDN
VGFYLDKDSN YVGGAVITNN GTITGTAGNN NVGIYNYGGT IDNYGTVAVG GSDIVISKGV
VDSDKSKYAV GLYGENAAII NHSGATVTAG YGGYGIVAKG GTGSNYGTVT TNGDYSVGMY
TENGTVTNES GGVINVTGDN AIGMGGKGTN SFITNHGTIN ITGNDAIGMY ANPGTIITNT
GTINITGNGQ AFVSSDPDDP AHSVNSGSAT INGVSDNVIQ GLGNTYAIPT LINAGIIKTT
GVLALDGIQV LIKTDLSTRQ ASSDPNYDFV ISGTSITADE ILTTKPIVIM PGFADGTNAD
VYKLEGLIKA NSGKYDFISG SLLWEATPKV TSTGADIYMS RKAFTDFTDG LWFEDFGTAL
ENNYAAATGD GVKIYNKTGY IADEESFRHI MASLAGNVYA NINQRENDIA NAFENSLHLM
QNSTNNTKEN VKVNIIAGKG KNKEETDGVT SYDYTTTGVL ALREVERTYR HTFGYSLGYL
HTGFEFNDGN ESEEWVDTIQ LGVHNKYDAN SWQLRNDLTG RVSFHNVDRN IDWPSPLGRS
EMNGTYETYS ITSDNILGKE FGLGKRASIM PYGAFRAMYV TRPTFNESGL EALEVEGNDA
WSAKPRAGVE LKGSLPLGSK TAWQLKGALD VAYEYELADL NEREKARLIA IEDGYHKLSK
PQDEEGIFRT RASLGVEVED RYGIFLTGEY STGNNKENDY RAGVVFKAVF
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