Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0983 |
Symbol | |
ID | 8596462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1044683 |
End bp | 1051612 |
Gene Length | 6930 bp |
Protein Length | 2309 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003307782 |
Protein GI | 269119605 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ATAAAAAGTT TATAGTAGGA TTTTTAGCAT TGAATTCTAT GATAACATCC TATAGTGAAA CTTTGGGAGT TCAATCTTCG GGAAAATATG ACAGAATATA CGAAAATATA ATAAAAAATA TAAACAGAGG CAGACCAAGC GATACTTCAT ATAAATTAAT AGAACAAATG CTGAAAAAGA AAAATAAAGA ATTAAAAGAT TTATATAATC AGGGCGATTA TATTGTAAAG CCTGAATATC TGGAATGGCA GATATTTTTC AGCGGATTTT ATGCAGAAAG GGATAAGGGG GATAATACTG AGGAAAATGC TGAAAGACAT TCAGATCCTA CATATGGGAC AACAGGGTTT TATGACGAAG ACGGCAGATA TATAATAACA GGAACAAATA AAGCAGCTTA CGGAAAAGAA TACAGAGATC CTCAGGCACC AAGAACCGTT AATCTGGGAG TAAGCATTCC TATAAAAGGG CTTTCCAGAG GAGAGGTACA CCTTGATTTG CCGTCGGGAA GTCCTGTAGA GATAAATCCG AGAAATTATG ATGTATCTCC TCCTTCCGGG CTGGTAATTC CTGAAATTAA TGTGTTCAGA TTTGAAATAA ATATTCCTTC AGTAGTCCTG CCTGTTATAA CTACTCCGGG TTCATTTACC GTATCTGTTC CTGATACCGG TAATGGAGAT GATACTGGAA GTTATCTTGG AGTAGCAAAT TCATATACTG CTAAAATAGC TCAGTTTAAT CTTACATCAG GACTTTTGGA AGGAACATGG AGCAGTACTT CCAGTCTGTC TGCTTACAGA GCAGTAAATT TAAACGGGAA AAGCGATTAC GGCGGAACTA CAATGGGAAG CAGAGCAGAT ATTACAAATT ATACTTATTC TTCAAACAGC GGTGACGGAG CCGTGGCACT GTATAAAGTA GGGGGAGCTG AAAAAATAAC ACTGGGGACA CAGGGAGATC CAAATGCTTT TATAATGAGA ATAATAAGTA ATGTGGGTGA TTCATATCCG GCTGCCAGTA CACTTCCGCA TTTGATACAA TATGATCCTC ACGGAAGCCG AGGGACTTAT AACAGATATC TTACGAATTA TTACGGAACA GGAATTACGC CTTCAGGAAT ATTTGATTAT TATGCAGAGC TTAATAACTA CGGAAGACTG GAGGGAATAG GTGATTCATT TCTAATGATA GGTCTTCAGG AGCATACGGG AAATTTCAGC CCCACTGTAA AAAATTACGG AACAATAATA GGGATCGCAG ATGATCAGTA TACTCAGGGC GGAAGAAGAC ATGTAGCTTT TTCATTTATG GCACCGCAGC AGCATGGAAC ACAAGGCAGA AGATTTGAAT TTTATAATAT GACCGGTGGA AAAATTGAAC TGCAGGCAAG AGAAAGTATT GCATTTAATT TTGGTGCTTC TCCCGGACTT GCTACCAGAC CGCATTTTTT GATATATAAT GACGGAGATG TTGTTCTTTA CGGGAATAAC AGCGTGGGAG TGAAAACAGC AAATAATAAT CTTGATCTCC CATATTCAAA ACTGGTATTT AATAAACCTA TAAGAATAAA CGGAGATCAG AGTATAGGAG TAGAACTGGT AAAAACTATG GATGACGGAT ATGGAAATGT AGAAGCCGGG AAATATGATC CTATGGAAGC TGTGATCAAA GTCATAATAG GTGACGAGCC GAACAGTAAC ACCGGAGATT CTAAAGGAGA TAAGTCAAAA GTAGAAGAAT CAATAGGTTT ATATATAAAT AAATCAACTA TTGATTACAG GCTCGGAACC TTTGATTTTC AGTTTGGGGA ATATGCCAAA AGAAGTACTT TGATTAATAT TTCCAGCGGA AAGTTATTTC TGGATGATAA TAAAGTAAGT GAAATATTCA TAAATAAGGG GATAGATAAT TTTGGTATTA TTGCAACAGG ATCAGCCTCC GAATTAACAT TAAAACCAAA TATTAAAATA GGAACTGCGG CGGATAATGT AAACGGAACA ATAGCATTAT ACGGGACAAA CGGAGCAAAA ATTCATCTTC ATTCCGGAAA TAATATCGAA ACAAACGGAC TAAATTCTCA CGGAATAATA CTAACCAATT CGAATACAGT TCTGGATGAT ACATCATCCG GCGGTTCAAA CCATTCTTTT ACAGCGACGG GTAATGAAAG TACAGTAATA TATACAGAAA ACGGAGCTTC AGTAAATCTA GCCAATTCAT CAAATATAGA TGTAAAAGCA ACAGGAGAAA AATCAATAGG GGTATATACA AAAGGAGGAA CAGTAACACT GGGAACAGCA GGTACAGGTA CGGGAACATA TGAAATAGGG AAAAACGGAG TTCTCTTTTA TAGTGACGGT ACCGGAAACG GAAGAATAAA TATTTCGGGA ACTGACTTTA CTGTGGGAGA AGGTTCATTA TTTGTAAGAA TAAATACGCC GTCGTTAATT GCAGGTAATC AGCAGATAAA TTTTACGCAT AATACAGGAA ATACAAATCT GAATCTGCTG TCAGGAGGTA TAGGATTCGT CTATACCGGA GACGGAATTA ATCCGGTAGG GCTTTCAGAT ATTCAGAATT ATTTTTCAAA TAATTTTACC GGAATCAGCA ATATGAATGT AACAGTTAAT AAAGGAGCAA GACTTTTTGT AATAGAAAAG TATGCATCTA TGAATCTTTC GGATATTATA GCAATCAGTT CCCCGACAGG CTTATTTAAT GATGTGCGGA ATAACGGCGG AAGTAAAGCA TTTATGGTAA GGGGTAATCT GGTTCTTGAT CCTGCAGGGG GTGTAATTAA CCTTGATGAT ATAAATGAAG ATTATAATAA CATAGAAAGA GCACTAACGG GAATAACGGT GCCTTCGGGG GTGACTGTAA CAGGAAGCGG CGACAGACAG ACTGCATTGG TAGATGATAA TTCATATGAC AGTACATTAT ATGTAAAAAT GGAGAATAAC GGAACTATAA ATCTTACAGG AAATAATTCA ACAGCAATAT ATGTCAATAA CGGACAGATT GATAATAAGG GAACGGTCAG CTCTATAGGT AACGGAGGAA TAGGGTTGTT TGGAGAAAAT GGTACAGTGA TTAAAAATAC AAATTTAATA ACCATAGCCG ATAACGGAGT AGGAATATAC GGGATATCAT ATCAGGATCC TGCTTCAGTG CCTGTATACG GCGGAGGGAA AATCAATATT ACCAATACAG GAATAATTCA ATCAAATACG GGACAGCACG CTATAGGAAT ATATGCCGAA AATAACAGGA CAGGCGGAGG AATTGCGGAT TCACATATAG ATTTGTCAAA TGGAAAAATA AATCTTCAGA ATTCAGAAGG AGCAATAGGC TTATATGTGG ATAAAGGAAC AGTCACAGAC TCAGGCTCTG AGATAACTGT GGGAAAAAAC GGCATAGGAA TATATGCAAA AGACAGCGAT ATAACATTAA CAGGGACAAC AGTAAATTTA TTTGGTGATA ATGCTTTGGG GCTGTATGCT GACGGAAATA CCAATCTTAT TGGGAATGGC CAGATAAACA TATCAGGAAA AAATGTTGTG TTATTTAATA TGGTTTCAAG CGGTTCAATA ACTAATAATT TTGTGGTAAA TAATGTAGCA CCCGGTTCTT CATATACTTT GGGAAATATA TCCGGAACGA GCTTTGAATA TGCGGGAAGC AGTCACCTGT CATCAGATGG AACGCTGATT AGCGGAAAAG ATTCCACAAT ATTATTAAAT GCTCTTTCAT CAGTAAATGC TAATTCGGGA GAAATAAATA TTGCTGCTCT TATAGCAGAC GGGCAGTATA CAGGAATTAC TCCTTCAGGA TTCACTCCGG GAATAGAGGG GGAAAACAGA GGAACAATCA TAATGGGGAA TTTATCCGCG GGATTAATAG GGAAAAATAA TGCAAGATTA AAAAATGACG GTTTCATAAC TGTAGGAAAT AATTCGGCAG GTATGACATC TTTTGGAGGA GGTGCCCTTT TATTAAATAC AAAATCTATA ATAATAGGGA GTGATTCACA CGGGATGTAT CTGCAGAATG GTACTGATAT AACCAATGAT ACGGGGGGAA TAATAACAAG TGCCGGTAAT AATTCGGTGG GGATATATGC TGATGCTATA ACAGGGACTA TTACAAACAA AGGGATAATA AGGTTAACCG GTGATAAAGA AATAGGAATT TATGCAACAG GAGCAAGCAA TAAAATAATT AACAATGACG GTTTAATAGA AATAGGCGAC TCAATTGACA TAAATGTCCC GAATATAGGA ATCTACAGCG AAACTGCCGG AGATACATTT ACCAACAACG GAACTGTAAC TTCCGGAAAA AATTCAATAG GAATGTACAA TTACGGGGAT ACGGTAATAC AAAACGGAAT ATTGAATGTG GGAGATACGG GGGTGGGAGC ATATATAACA AATGGTAATA TAACTAATAC AACTGCAGCA CAGTTCAATT TTATGAGCAT AAATGCTATA GGAGTATATG CTTTAAACAG TCAGGTTTCC AACAGTGCCT TGATGAATAT AGGCAACAGT AATTACGGAT TTATATTAAT GGACAGCAGC TTTATAAATA TGGCACCTAA TATTAATCTG GGAACAGATT CGGTGTTTGT TTACAGATCA GGGGCAGGAA ATATAGTAAA TAATGCAGGT ACTGCCATAG CAATGAGCGG ATCAGACAAC ATTGCTTATT ATACGATAAA CGGCGGAAGT ATAACAAATG ACGGGGATAT TATCGGAACA GCCGGAAAAA ATAATGTAGG TATTTATAAT GTCGGAGGCG GAATTCTAAA TAACGGTATA GTGGCGATAG GTGATTCAGA TATAGCATAT AAAAAAGACA GCCTGGGAAA CTATATATAT GATGTTAACG GAAACAGAAT ACTAGATGCG GAGAACAGTA AATATGCAGT TGGACTTTAC GGGGAAGGTT CTGCTATATC AAACAGTGCA TCAGGAAATA TTACAGTAGG TGAGGGTTCG ATAGGAATAG CCACAAAGGG CGGAAGCGGA ATCAATGATG GAGTAATAAC AGGAACGGGT GAAAGTACAA GAGGTATGTA TACTGAGAAA GGAACAGTAA TAAATAATAA TATCATAAAT ATAACAGGGG ATAATGCAAT CGGAATGGCA GGAAACGGAG CAGGATCAGT AGTTATAAAC AATGGTACGG TTACAGTTAC CGGAAAAAAT GTAATAGGAT TATACGGGAA TCTCGCAACA ACAGTAATAA ACTCTGGAAC AGTAATAGCA AATGGCGAAG GTGCAGCGGG AATAGTACTT TCACAAGGTT CGAAGCTGGA TAATACAGCA AGCGGGACTA TGATAATTAA TAGTGTAAGA ACTGAGAATT ACGGGACAAG TGCCGGTGAA ATATATGAAA CTCCTACAAT AATAAATTCA GGAGTAATAA AAATATCAGA AAAATTTGAG ACAGACGGAA TAAATGTAGT AATAAAGGTA GATCCTGAAA GTGTAAGAAA GCCCACACCG GAAGAGATAG CAGCCGGCGG ATATGATCCG TCAGATTCAG GAGCGGACTA TCTTATATCA AATGCAGTGA GTATAGAGGC GCCTTCATTT ACTATAACAG ATCCGCTGCA GATAAGCGGA AATTTCACAG AAGGAACAAA TGTAAAAAAA TATAAACTTG AAGATATAAT AAAATCAGCT TCGGGGCACG GAGTAAATGA AGGAATGGTT CCTGTAGTGA GCAGATCACT GACCTGGCGG GCAACTCCGA TAGTAAATGA AGCAGGACAT GTGGATATCT GGATGGAGAA AATAGACTAC AATGAATTTA CCGGAGGCTT GTGGTATGAG GAATTCGGTG CCGCTTTGGA AGATAAATAC TATAATGCTG CAGGAGATGC ACTTACTATT TATGATAAAA TAGATGTCAT AGAAAAAGAA TCTGATTTTA GACATGTAAT GGCAAGTCTT GCAGGAAATA TATATTCCAA TATAAACCAG CGTGAGGAAG ATATGGCAAG AACTTTTGAA AATGCATTGG ATGTAATCAT AAATTCAAAA AATAATACAA AAGAAAATAT AAAAATAAAT ATAATAGCTG GAAAAGGTAA GACTAAGGAT GATACAGACG GTATAACAGA TTATGATTAC ACAACAACCG GAATACTCGC ACTCAGAGAG GTGGAAAGAA CCCACAGACA TACATTCGGT TACTCGCTCG GATATCTTCA TACAGGATTT GAATTTAAGG ATGGAAATGA GAGTGAGGAG CTGGTGGATA CAATACAGCT GGGAGTACAT AATAAATATA CAGTAAACGG ATGGAAGCTA AGAAACGATT TGACAGGAAG AGTAAGTTTT CATAATATAG ACAGAAATAT AGACTGGCCG AACAGACCGT TTGGGACAGA AAGGGAAGAA ATGAACGGAA ATTATGAAAC TTACAGCTTC ACATCTGATA ATATACTGGG AAAAGAATTT AGTATTGGGA AACAAGTAAG TGTAATGCCT TACGGGGCAT TCAGAGCTAT GTATGTGACA AGACCGACAT TTAGCGAGAG CGGTACGGAA AGACTCCAGG TAGAGGGAAA TGATGCTTGG AGCGCAAAGC CGAGAGCGGG ATTGGAGGTG AAAGGAGAGA TGCCGCTGAG TAACAAAACA GCATGGAAAC TAACTGGAAA ACTTGACTTT GCTTATGAAT ATGAACTCGC TGACTTAAAT GAGCGGGAAA GAGCAAAACT CATAGCAGTG GAAGACAGTT ACCATAAATT ATCAAAACCA GAGGAAGAAA AAGGTATGTT CAGAGCAAAA GCTTTATTTG GCATAGAGGT GGAGGATAGA TACGGTTTAT TCCTTACAGG GGAATATATG ACGGGAAATG ATGATCAAGA TGATTACAGA GCAGGAGTAA CACTAAAAGC AGTATTTTAA
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Protein sequence | MKKYKKFIVG FLALNSMITS YSETLGVQSS GKYDRIYENI IKNINRGRPS DTSYKLIEQM LKKKNKELKD LYNQGDYIVK PEYLEWQIFF SGFYAERDKG DNTEENAERH SDPTYGTTGF YDEDGRYIIT GTNKAAYGKE YRDPQAPRTV NLGVSIPIKG LSRGEVHLDL PSGSPVEINP RNYDVSPPSG LVIPEINVFR FEINIPSVVL PVITTPGSFT VSVPDTGNGD DTGSYLGVAN SYTAKIAQFN LTSGLLEGTW SSTSSLSAYR AVNLNGKSDY GGTTMGSRAD ITNYTYSSNS GDGAVALYKV GGAEKITLGT QGDPNAFIMR IISNVGDSYP AASTLPHLIQ YDPHGSRGTY NRYLTNYYGT GITPSGIFDY YAELNNYGRL EGIGDSFLMI GLQEHTGNFS PTVKNYGTII GIADDQYTQG GRRHVAFSFM APQQHGTQGR RFEFYNMTGG KIELQARESI AFNFGASPGL ATRPHFLIYN DGDVVLYGNN SVGVKTANNN LDLPYSKLVF NKPIRINGDQ SIGVELVKTM DDGYGNVEAG KYDPMEAVIK VIIGDEPNSN TGDSKGDKSK VEESIGLYIN KSTIDYRLGT FDFQFGEYAK RSTLINISSG KLFLDDNKVS EIFINKGIDN FGIIATGSAS ELTLKPNIKI GTAADNVNGT IALYGTNGAK IHLHSGNNIE TNGLNSHGII LTNSNTVLDD TSSGGSNHSF TATGNESTVI YTENGASVNL ANSSNIDVKA TGEKSIGVYT KGGTVTLGTA GTGTGTYEIG KNGVLFYSDG TGNGRINISG TDFTVGEGSL FVRINTPSLI AGNQQINFTH NTGNTNLNLL SGGIGFVYTG DGINPVGLSD IQNYFSNNFT GISNMNVTVN KGARLFVIEK YASMNLSDII AISSPTGLFN DVRNNGGSKA FMVRGNLVLD PAGGVINLDD INEDYNNIER ALTGITVPSG VTVTGSGDRQ TALVDDNSYD STLYVKMENN GTINLTGNNS TAIYVNNGQI DNKGTVSSIG NGGIGLFGEN GTVIKNTNLI TIADNGVGIY GISYQDPASV PVYGGGKINI TNTGIIQSNT GQHAIGIYAE NNRTGGGIAD SHIDLSNGKI NLQNSEGAIG LYVDKGTVTD SGSEITVGKN GIGIYAKDSD ITLTGTTVNL FGDNALGLYA DGNTNLIGNG QINISGKNVV LFNMVSSGSI TNNFVVNNVA PGSSYTLGNI SGTSFEYAGS SHLSSDGTLI SGKDSTILLN ALSSVNANSG EINIAALIAD GQYTGITPSG FTPGIEGENR GTIIMGNLSA GLIGKNNARL KNDGFITVGN NSAGMTSFGG GALLLNTKSI IIGSDSHGMY LQNGTDITND TGGIITSAGN NSVGIYADAI TGTITNKGII RLTGDKEIGI YATGASNKII NNDGLIEIGD SIDINVPNIG IYSETAGDTF TNNGTVTSGK NSIGMYNYGD TVIQNGILNV GDTGVGAYIT NGNITNTTAA QFNFMSINAI GVYALNSQVS NSALMNIGNS NYGFILMDSS FINMAPNINL GTDSVFVYRS GAGNIVNNAG TAIAMSGSDN IAYYTINGGS ITNDGDIIGT AGKNNVGIYN VGGGILNNGI VAIGDSDIAY KKDSLGNYIY DVNGNRILDA ENSKYAVGLY GEGSAISNSA SGNITVGEGS IGIATKGGSG INDGVITGTG ESTRGMYTEK GTVINNNIIN ITGDNAIGMA GNGAGSVVIN NGTVTVTGKN VIGLYGNLAT TVINSGTVIA NGEGAAGIVL SQGSKLDNTA SGTMIINSVR TENYGTSAGE IYETPTIINS GVIKISEKFE TDGINVVIKV DPESVRKPTP EEIAAGGYDP SDSGADYLIS NAVSIEAPSF TITDPLQISG NFTEGTNVKK YKLEDIIKSA SGHGVNEGMV PVVSRSLTWR ATPIVNEAGH VDIWMEKIDY NEFTGGLWYE EFGAALEDKY YNAAGDALTI YDKIDVIEKE SDFRHVMASL AGNIYSNINQ REEDMARTFE NALDVIINSK NNTKENIKIN IIAGKGKTKD DTDGITDYDY TTTGILALRE VERTHRHTFG YSLGYLHTGF EFKDGNESEE LVDTIQLGVH NKYTVNGWKL RNDLTGRVSF HNIDRNIDWP NRPFGTEREE MNGNYETYSF TSDNILGKEF SIGKQVSVMP YGAFRAMYVT RPTFSESGTE RLQVEGNDAW SAKPRAGLEV KGEMPLSNKT AWKLTGKLDF AYEYELADLN ERERAKLIAV EDSYHKLSKP EEEKGMFRAK ALFGIEVEDR YGLFLTGEYM TGNDDQDDYR AGVTLKAVF
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