Gene Sterm_0967 details

Gene Information

• Locus tag: Sterm_0967
• ID: 8596446
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1023641
• End bp: 1030441
• Gene Length: 6801 bp
• Protein Length: 2266 aa
• Translation table: 11
• GC content: 38%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003307766
• Protein GI: 269119589

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA ATAAAAAATT ATTGGTTTCT TTTCTAGCAC TTAATGCAAT GATGCATGCT 
TATGGAGCAA ATACAGCTTC GGCAAAATAT GACAGAATGT ATAACAGTAT TACAAAAAAT 
ATAGAAACCG GAAAATCAAA TGAAAAAAAT TATCAGGTAA TAGAAAGAAT ACTTAAACAA 
AAAAATAAAG AATTAAAAGA TTTATATCTG CAGAATGACT ATGTAGTAAA GCCTGAATAT 
CTTGAATGGC AGGTATTTTT TACAGGTTTT TATGATGAGT ACAATGAGGG AAGGGATAAT 
AGTTCTGAAA ACTCATTATA TCATTCAAAA GTAACGGGAT ATTATGATAC GACCGGCAGT 
TATATAGTAA CAAGCGGTTT TAAAGACGGG ACATCTGGAA AACCTTATAA GGAACTGCAG 
CAGCCGAAAG AAATAGATCT GGGTGTAAAT GTTCCTATAA GCGGAATAAC AAGACCACCT 
CTTAGTTTAA ATATTACGCC GAACAGCGGT TCGGGAGTAA CAGGTAACTA TGGTCCGATT 
ACCATAGCGG CTCCAAGCAT AGCACCAGGG GTTAATATTA CTCCGTTTGT TCCGACAAAT 
CCGGAAATTG TAGCACCGGG GTTACCCTTA GCGCCAGATT TTACAATAAG AGTTACATCG 
TATTGTAATA CTTTTTGTTC TACGATTATA CAGCGTGGCG GAAAAGGGAA TTCGAGTTTC 
TCACAGGCAG ATATTATTGC GAATCCTTTA CCGGCAATTA GTTTTAGCTG GGCAGGAGCA 
ACACCGTCGA CAGGATTAAT TTTTAAGTCA TTTCTTGATA CTGGGGTAAT GTCTGATTTT 
GGATCTTCAG GAGTAGCACC ATCATTACAG GAAATTACAA TAGATTCTAT ACCGGAAGCA 
CCCTATACGT CAAGTTTCGG AGGGAGTGTT ACCTCAACTT TGAATGACCA GTATTTTTAT 
GTCGGAGGTT CAAGGGTCGG TTCAATAAAT AATTACGGGA CTGCTGGGAT TAACAATTAT 
GCCAAGGTTA ATATGATAGG TTTTAATGTA ATCGGTTTTG AAGCACAAAC TTTAGGCGGA 
GATCAAATAA TAGAAAATCA TGGGATTATC AGCGATGAGA TAGAAAAAGA TAATGCATAT 
GTACAAAGCG TTCCCTCGAG TTTCTCAATG CTAAGAGCTG ATTCAGGAAC AACGACAGAA 
TCAATAACAG TTAATAAATC TGCAGACGGC TATATAGGAT ACAAAGTCGG TATGGCCTAT 
GTGGATGAAG GAAATAAATC AAGTGCAGCA ACGAATTATT CAAGATTTGA AAATTATGAA 
ACAATAGAAT TTTATGGACC AAGATCGATA GCGATGCTTT CATATATTCC CGGTTATTCA 
GATTTAGCAG GAGGTTATAA TGCAACTGAT GCAGGATACC GTGTATTTTG GAGCAACAAA 
TCTGGCGGAG ATATAATTTT ACATGGAAGT GAAAGCTACG GAATAAAAAT CGGGAATGCA 
ATTACCGCAG ATTCTACAGT ATATAATGAA GGAATGATAA AATTTACTAA AGGATTTAAT 
GCAGATAAAC CGGATAACAG TATAGGTATG GCTGCTATAG AAGATCCCGG AATAAATTCG 
GCAAAGCCAC AGCTGAGAGT AAATATTTAT AATGGTGTAA TGAAAAATCT TGTAACAGGG 
ACTATAATGT TTGAAGAAGG AACTACAAAT TCAACAGGAA TGTATCTGAA AGTTTTAGGA 
AATAATGATA TAACAAATGA AGGAACAATT TTAATAGACT CAACAGCGGG CAAAAAAAAT 
ATGGGAATGC GTGTTGATCT GGGAAGTATA GATTTGGGAA CAGCACCGGA TAAAAATCCT 
GTTGCAATAA ATACAAAGGA CATTAAGATT AACGGAGTTA ATACATTGTC AGAAGCAGAT 
TATGTCAATT ACGGAATGGT AGCAAACGGC AAATCAGGAA TAAACATTGC TACAGCAAAA 
AATACAGGAA CAGGTGTAAT ATCAGGAACA GGAGATAATG TAGTAGGATT ATTTGCAGTA 
AACGGAGGAA AAGTCGAAAA TGCCGGAACA ATTAATTTTA CTGACAATAC AACAAAAGGC 
AAATCAGGAA TAGTAGTAAA ATCAGGAAGT GAGGGGGTAA ATACCGGATC AGTTACAATT 
GTTGGAAATA ATTCGGTAGG ATTTTACAAT GAAGGTTCCT TTATAAGTGA TTCCGGGATA 
TCTGTGACAG GAAATGACAG TGTGGGTGTT TATTCACTTG AAGGTTCTGC GAATACTGAA 
ATTAAAGCAG GGACAATCAC AGTATCGGGG AATAACGGAG TGGGAGTTTT TGCAGCAGCG 
CCGACAAATG CTGGGACAAC AGTAAAGCTT GGAAGTACAG GAGCAGTAAA TTTGAATGTA 
AGCGGAACTG ATACTTATGC TTTTTATGCA AGCGGGTCAA ACAATGTATT TTCAATTCTG 
GATAATACTA CAGTAAGTGT AGGGGCAGGA AGTATAGGAT TTCAGTATAT CGGCTCGGGA 
TTGTCCAACG CAATAAGCAG TTCGGATATA TCAGCAATGT TTCCTGTAGC TGCAGGAAAA 
AGCCTGACTT TTAATCTGGA TCCCAATTCA TATGCAATGG TAATTCAAAA GGCTAAAATA 
TCTTTATCTA ATATCGGTAC TTTTTCATCT ATTTTACCGT CAAATGTGAC TATGACAGGT 
TCGAATAAAG TAAAGATATA TAAAGGTCAT CTGGAAATAG ATGAAAATTC AAATATAGAT 
GCCGGAGCCG GAACAAATAT AAAATTCAGA GATCTGCCGG TAGCTGCTTC ATCAGTAACT 
TTATTAGCAG GAAATACAAT AACCGGAACT GAAGGAAACC TTGTGGGTAT AGGACAGGAA 
AATGATGACA GACTTCCTTT GACTCCAAAT ACTGATATCA CCCTTACTAA TAATGGTACA 
ATAAATCTGA GCGGGTCGAA TTCAACAGGA TTGTATACAA GCTACGGAGT ACTTAACAAC 
AGCGGTTCAG GAATAATAAA TGTATCGCTT AACGGAGTGG GATTGTATGG GACAAATGGT 
ACAGCAGCAA CAAATTCCGG GGTAATCACC TTTGGTGATA ATGGAATAGG AATATACGGT 
GCCAATGTGA CGCCTGCAAC AACACCGACT TACGGGACAA AGAATATAAA TATAACACAT 
TCAGGAAGTA TAGTATCAAA TGGGGCAAAT AAAGGATATG GAATAATTGC CGATAATGAT 
AACAGCGGTA CGTCAGCAAT AACAATAAAT GCAGGGTCTG CAATAGATCT AAGTTCTGTG 
ACAAATGCTG CGATCGGAGA TTTGATAGGA GTATATGCCA AGAATACCAC AGTAAATTCC 
GACGGTGATA TAACAATAGG CAAAAACGGG ATTGTAATGT ATGCGGAAGA CAGTATTGTA 
AATATCACCG GGGGAACAAT AAACATAACT GGGGATAATG CACTTGGATT TTATCTGAAG 
GGTGCAACAA ACTTTACGAG TACTGCAGCT GCAACAATAA ATATTTCAGG ACAGGGAGTA 
ACATTATTTA ATCTGAATAC AAATCCCGGA ATGACATTTA CGAATTTGTT TACTATAAAT 
ACAATCGGAA CAGGAACATA TACTTTAGGA AGTATTGCAA ACGGTTCTTA TTATTATAAC 
AGTTCGACAG TATTAGGCGG CAATGGCGCC ATGGTGTCTG CAAAAGACTC TACAATATTG 
TTTGATACTG GTGCAAATAT AACTAGTACA GGTGATAATA ATATAGCAAT ATATGTGGAC 
AATGTTTATT CAGGACTACC GGTTGCAGGG TTCACGCCCG GAACAGAGGC TGAAAACAGA 
GGAACAATTA CATTAAACAA TTCATCGGCA GGATTATACG GTATAAACGG AGCAAGCCTG 
AATAACAGCG GTGCTATAAC TGTAGGAAAT GGCTCTACAG GAATTTACGG ATCAGGAGCC 
ACAGCAAATA TAATAAATAC AGGAACTATA ACAATAGGGA ATGACTCACA GGGAATTTAT 
CTGAAAGACG GACAGACAGC AGATAACAGC GGAGTGATAA CAAGTTCCGG TTCTAAGGCT 
GTAGGAATGT ATACAGATAA TGTATCAAAT CCTATATTGA ATAATAATCT GATAAATTTG 
ACCGGTGATA AATCAATAGG TATTTATGCA GCCGGTGGAG TTAAAATAAT AACAAACAAT 
GGAACAATAA AAATCGGAGA TTCATCAGAT CTGAATGATC CAAGCATAGG TATCTATACA 
ACAGCGGCAG GAGATACAGT AACAAACAGT GGTATAATAG ATACAGGAAT TAAATCAATA 
GGAATTTACT CAGAAGGAGC AGCAGTAAAT CAAAATGGGA CATCAACAGT AGGTCAGACA 
GGAACAGGAA TATATACAAA AGGAGGTTCT GTAACTCTCG GAGCAGCAAG TATAGTATCA 
ATAGGACAAA ATGAAGCAGT AGGAGTATAT GGAACGAATG GAACTTTAGT AACAAATAAC 
AGTACTAATT TTTCAGTAGG CAACCGAGGT TACGGGTTTG TACTGGAATC AAATTCGGCA 
TTAAATAATA ATACTGCAAT AAATCTCACA GGAAAAGGAA CCGGGGTATA TTCAGACGGG 
ACAAATACTG TTACCAGTAT AGCAGGAGCA GATATAAATA TGACAGGTGA TAACAATATA 
GGCTATTATC TGGTAAATGG AGGAACAGTA ACAAACAGTG CAGATATAAA CGGCACTTCC 
GGAGAATCAA ATATAGGAAT ATATGCTAAA AATGGAGTGA TAAATAACAG CGGAACAATA 
AGTGTAGGAG ATTCAGTATT AGCATATAAT TTAGACGGAA CAGTAGATTA TGATAACAGC 
GGTTATGCAG TAGGAATCTA TGGGGAAGGA TCACAGATAA ATAATACAGG AAATATAAAC 
ATAGGTGAAA ATGGAATAGG ACTGTATACA AGGGATAATG GTACAACACC GGTAGTAAAC 
CAAGGGAATA TAACCGGGAC AGGAAAAGGA GCAACGGGAA TATTTGTAGA TAATGGAATC 
GCCGAGAATG CAGCTGGAAC GATAATAACA ATGACAGGTG ATGATTCCAT AGGAATGGTG 
GCAAATAAGA ACGGAACAAT AATTAATAAC GGAACAATAA TAATGTCAGG AAATAATGTA 
TCTGCGATGT TTGCCAATAT AGGATCCACA GCAATAAATA ATAATGTAAT AGATATGACA 
GGAGCAACCG GAGATAAAAG TACAGCATTT TTATTAGGAG CAGGTTCAAC ATATGAAAAT 
TACGGGACAT TAAATCTAGG CTCAAATGCG ACAATATCAG GAACAGCCGG GATCACTCAC 
AAAATACCGA GCATGGTAAA CGGTGGAATA ATTCAGGCAA GCGGAGTACT GGCAGTGGAC 
GGGATATCTT TATCAATAAA AGTAAATCCT GACAGTGTGG TTTATCAGAC TTCAGTAACC 
TCAGGACCGC AGTTTGTGGC AAACGGAGCT TCAATAGTAG CAGATACGCT GATAACAGAT 
AAACCGATAA CAATACTTCC GGGATTTGCA GACGGGACAA ATGCAAATGT ATATAAGATA 
GAAAATGCAG TTATAGCATC CGGAGGAAAT TATGAATTTA TAAGCGGCTC GTTATTATGG 
GAAGCAACAC CAGAAGCAAC AGGAACCGGA GCAGATGTAT ATATGGAAAG AAAAGCATTT 
ACAGACTTTA CAGATGGATT ATGGTTTGAA GATTTTGGAA CTGCCCTTGA AGAAAATTTT 
CTGGGAGCTT CCGGAGATGC AATGCAGATT TATAATAAAA CAGCATACAT AAAGACTGAG 
GAAGAATTCC GACAGATAAT GTCGAGTCTG GCAGGAGAGG TATACGCTAA TATAAATCAG 
AGAGAATATG ATATAGCAAA GGCATTTGAA GACTCGCTGC ATTTACTTCA GGATTCCTCA 
AATAACACAA AAGAAAATGT AAAAATAAGT GTAATAGCAG GAAAAGGAAA AAATAAAGAG 
GAAACTGACG GAGTCACAGG TTATGATTAT ACAACTACGG GAGTACTGGC TTTACGTGAA 
GTAGAAAGAA CCTATAGACA TACATTCGGA TATTCACTTG GATATTTACA CACAGGCTTT 
GAATTCAAGG ACGGAAATGA AAGTGAAGAA TGGGTAGATA CAATCCAGCT CGGGGTACAT 
AATAAATATG CATCGGACGG ATGGCAGCTG AGAAATGACC TTACGGGAAG GGCAAGTATT 
CATAATATAG ACAGAAATAT AGACTGGCCG TCGCCGCTAG GCAGATCAGA AATGAACGGA 
ACATATGAAA CATACAGTAT CACAAGTGAC AATATACTTG GAAAGGCATT TGGTCTAGGC 
AAGAATGCGA GTGTAATGCC GTATGGAGCA TTCAGGGCAA TGTATGTGAC AAGACCTGCA 
TTTAATGAAA GCGGACTGGA AGCTCTTGAG GTGGAAGGCA ATGATGCATG GAGTGCAAAA 
CCGCGAGCCG GTGTAGAATT GAAAGGTGCA GTACCTTTAG GAAGCAAGTC AGCGTGGCAG 
CTAAAAGGAA CTCTTGATTT TGCTTATGAA TATGAGCTTG CAGACCTTAA TGAAAGGGAA 
AAAGCAAGAC TGATAGCCAT AGAAGACGGA TATCATAAGC TTGCAAAGCC GCAGGATGAA 
AAGGGGACAT TCAGAACAAA AGCAGCAATA GGAGTAGAGA TAGAAGACAG ATACGGAATA 
TTCCTGACAG GAGAATACTC AACAGGAAAT GATAAGGAAA ATGATTACAG AGCAGGAGTG 
ACATTAAAAG CAGTATTTTA A 

 

Protein sequence

MKKNKKLLVS FLALNAMMHA YGANTASAKY DRMYNSITKN IETGKSNEKN YQVIERILKQ 
KNKELKDLYL QNDYVVKPEY LEWQVFFTGF YDEYNEGRDN SSENSLYHSK VTGYYDTTGS 
YIVTSGFKDG TSGKPYKELQ QPKEIDLGVN VPISGITRPP LSLNITPNSG SGVTGNYGPI 
TIAAPSIAPG VNITPFVPTN PEIVAPGLPL APDFTIRVTS YCNTFCSTII QRGGKGNSSF 
SQADIIANPL PAISFSWAGA TPSTGLIFKS FLDTGVMSDF GSSGVAPSLQ EITIDSIPEA 
PYTSSFGGSV TSTLNDQYFY VGGSRVGSIN NYGTAGINNY AKVNMIGFNV IGFEAQTLGG 
DQIIENHGII SDEIEKDNAY VQSVPSSFSM LRADSGTTTE SITVNKSADG YIGYKVGMAY 
VDEGNKSSAA TNYSRFENYE TIEFYGPRSI AMLSYIPGYS DLAGGYNATD AGYRVFWSNK 
SGGDIILHGS ESYGIKIGNA ITADSTVYNE GMIKFTKGFN ADKPDNSIGM AAIEDPGINS 
AKPQLRVNIY NGVMKNLVTG TIMFEEGTTN STGMYLKVLG NNDITNEGTI LIDSTAGKKN 
MGMRVDLGSI DLGTAPDKNP VAINTKDIKI NGVNTLSEAD YVNYGMVANG KSGINIATAK 
NTGTGVISGT GDNVVGLFAV NGGKVENAGT INFTDNTTKG KSGIVVKSGS EGVNTGSVTI 
VGNNSVGFYN EGSFISDSGI SVTGNDSVGV YSLEGSANTE IKAGTITVSG NNGVGVFAAA 
PTNAGTTVKL GSTGAVNLNV SGTDTYAFYA SGSNNVFSIL DNTTVSVGAG SIGFQYIGSG 
LSNAISSSDI SAMFPVAAGK SLTFNLDPNS YAMVIQKAKI SLSNIGTFSS ILPSNVTMTG 
SNKVKIYKGH LEIDENSNID AGAGTNIKFR DLPVAASSVT LLAGNTITGT EGNLVGIGQE 
NDDRLPLTPN TDITLTNNGT INLSGSNSTG LYTSYGVLNN SGSGIINVSL NGVGLYGTNG 
TAATNSGVIT FGDNGIGIYG ANVTPATTPT YGTKNINITH SGSIVSNGAN KGYGIIADND 
NSGTSAITIN AGSAIDLSSV TNAAIGDLIG VYAKNTTVNS DGDITIGKNG IVMYAEDSIV 
NITGGTINIT GDNALGFYLK GATNFTSTAA ATINISGQGV TLFNLNTNPG MTFTNLFTIN 
TIGTGTYTLG SIANGSYYYN SSTVLGGNGA MVSAKDSTIL FDTGANITST GDNNIAIYVD 
NVYSGLPVAG FTPGTEAENR GTITLNNSSA GLYGINGASL NNSGAITVGN GSTGIYGSGA 
TANIINTGTI TIGNDSQGIY LKDGQTADNS GVITSSGSKA VGMYTDNVSN PILNNNLINL 
TGDKSIGIYA AGGVKIITNN GTIKIGDSSD LNDPSIGIYT TAAGDTVTNS GIIDTGIKSI 
GIYSEGAAVN QNGTSTVGQT GTGIYTKGGS VTLGAASIVS IGQNEAVGVY GTNGTLVTNN 
STNFSVGNRG YGFVLESNSA LNNNTAINLT GKGTGVYSDG TNTVTSIAGA DINMTGDNNI 
GYYLVNGGTV TNSADINGTS GESNIGIYAK NGVINNSGTI SVGDSVLAYN LDGTVDYDNS 
GYAVGIYGEG SQINNTGNIN IGENGIGLYT RDNGTTPVVN QGNITGTGKG ATGIFVDNGI 
AENAAGTIIT MTGDDSIGMV ANKNGTIINN GTIIMSGNNV SAMFANIGST AINNNVIDMT 
GATGDKSTAF LLGAGSTYEN YGTLNLGSNA TISGTAGITH KIPSMVNGGI IQASGVLAVD 
GISLSIKVNP DSVVYQTSVT SGPQFVANGA SIVADTLITD KPITILPGFA DGTNANVYKI 
ENAVIASGGN YEFISGSLLW EATPEATGTG ADVYMERKAF TDFTDGLWFE DFGTALEENF 
LGASGDAMQI YNKTAYIKTE EEFRQIMSSL AGEVYANINQ REYDIAKAFE DSLHLLQDSS 
NNTKENVKIS VIAGKGKNKE ETDGVTGYDY TTTGVLALRE VERTYRHTFG YSLGYLHTGF 
EFKDGNESEE WVDTIQLGVH NKYASDGWQL RNDLTGRASI HNIDRNIDWP SPLGRSEMNG 
TYETYSITSD NILGKAFGLG KNASVMPYGA FRAMYVTRPA FNESGLEALE VEGNDAWSAK 
PRAGVELKGA VPLGSKSAWQ LKGTLDFAYE YELADLNERE KARLIAIEDG YHKLAKPQDE 
KGTFRTKAAI GVEIEDRYGI FLTGEYSTGN DKENDYRAGV TLKAVF