| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0653 |
|---|
| Symbol | |
|---|
| ID | 8596136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 701559 |
|---|
| End bp | 702416 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003307456 |
|---|
| Protein GI | 269119279 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTTTA AATTTGGTGT AGACAGTTTT ATATGGGCAG AAAAATTTAG TGAAAAGGAT
CTATGGATTA TTCCCAAAGC AAAGGAACTT GGTTTTGAAG TTATTGATTT TGCTATAGCA
GACCCATTTT CTTTTCCTGT TAAAGCTGTA AAAGAAAAGC TGGAAGAAGT AGGAATTGAC
TGTGTATGTA CTACTACTCT CACTGCTGAA ACAAATCCGA TTTCGCCCGA TCCGGAAATA
AGAAAAAATG CAGCAGAAGC TATGAAAAAA TGTGTTGATA TATGTGAAGA ACTGGAATCT
CCTATTTTGG GCGGGGTTAA TTATGCAGCA TGGGGTTATC TCACAAAAAA GCCGCGAACA
GAAGAAGAAT GGAATTGGGC TGTAGCTAAC ATGAAAGAAG TGTGTAAATA TGCCAAGGAA
AAAGGAAATG TCATTATCTG TGTAGAATGT GTAAATAGAT TTGAAACCCA TTTTCTGAAT
ATTGCAGAGG ACGCAGTTAA ATTCTGTAAA GATGTTGGTT ATGATAATAT AAAAGTTCAT
TTAGACTGTT TCCATATGAT AAGGGAAGAA AAAAACTTTA CCGAAGCAGT TAAAACATGC
GGAAAAGAAT ATCTGGGATA TATTCATGTA AATGAGAATG ACAGAGGTAT TCCCGGAACA
GGGCTTGTTC CGTTCAAAGA ATTCTTTCTT GCTGTTAAAA ATATAGGCTA TGAAGGTCCT
CTTGTAATAG AATCATTTGA TCCAAGCTTT GAAGAACTGA GCGGCAACTG TGCTATATGG
AGAAAATTTG CCGATACAGG CGAGGAACTT GCTGTCAAAG GACTTAAAAA TCTGAAAGAA
ATAGCCGAAA CTATTTAA
|
|---|
| Protein sequence | MYFKFGVDSF IWAEKFSEKD LWIIPKAKEL GFEVIDFAIA DPFSFPVKAV KEKLEEVGID
CVCTTTLTAE TNPISPDPEI RKNAAEAMKK CVDICEELES PILGGVNYAA WGYLTKKPRT
EEEWNWAVAN MKEVCKYAKE KGNVIICVEC VNRFETHFLN IAEDAVKFCK DVGYDNIKVH
LDCFHMIREE KNFTEAVKTC GKEYLGYIHV NENDRGIPGT GLVPFKEFFL AVKNIGYEGP
LVIESFDPSF EELSGNCAIW RKFADTGEEL AVKGLKNLKE IAETI
|
|---|
| |