| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0643 |
|---|
| Symbol | |
|---|
| ID | 8596127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 692540 |
|---|
| End bp | 693655 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_003307447 |
|---|
| Protein GI | 269119270 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000183544 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGACA ATTTTAGAAT TCATAACGGA AAACCGGGTA TTATAGAAAG TGTAAACCGG
ATAATTCGTG ATGCAACAAC AAAGCATGCA AGTGATATAC ACATAGATAT TAACAGCAGA
GAGTTTAACA TCCGCTACAG AATAGACGGT GTTTTGGAAA AAGCAGAAAA ATTTTCATTT
GATAATGAAA AGCTTGAAGT CATTTCAAGG ATAAAGATCA TTTCCGGAAT GAATATAGCA
GAGAAAAGAC TTCCGCAGGA TGGGAGTATC AATATCGTGA TAAATAATCG AAAATACGAT
ATAAGAGTAT CTTCTCTGCC AACTGTTGAT GGTGAAAGCC TTGTGTTAAG GATTCTTCAA
AATGAAGAGA AAATAACGGA TTTTGAGTCT TTGGGTTTTA GAGGCAAGAG TTTTTCCAAT
ATAAAAAAAT TAATTAATAA AAATCATGGA TTAGTATTAA TAAGCGGACC AACGGGTTCG
GGAAAAACAA CTACATTATT TTCCATAATA AATAAGCTTA ATGATAAGAG TAAAAAAATA
ATTACTGTAG AAGATCCTGT AGAAAAAAAA TTAAAAGGGA TAACACAGAT TCAGGTGAAA
GAGAAGATAG GACTGACTTT TCTTGAAGGC TTAAAGCACG TACTTCGTAA TGATCCGGAT
ATTATAGTAA TAGGTGAGAT AAGGGATAAA GAAACTGCTG AAATTGCAGT TAAATCTGCG
TTGACAGGAC ATTTGGTAAT TGCTACTATA CATACCAATG ATTCATTGTC AACTATTTTT
AGATTAATGG ATATGGGAAT TCCTGAGTAC TTGATTTTAA ATTCCCTGAA CGGGGTGATT
GCACAAAGGC TTGTCAGAAA AATATGTGTG AAATGCTGTG GTCAGTCCTG TCCTTCGTGT
AATTCCGGAT ACAGCGGGAG AATAAATATA AATGAAATTC TTGTTTTTGA TGACGGGGTA
CATGAATTAT TCAGAAAAAC AAATTCATTG GGAGAAATCA AAAATAAAAT CAAAGAAACC
GGATTTCGGG ATATGCTGGA TGATGCCCTT GAAAAAGAGA AAGAAAAAAT AATAAACAAA
GAAGAAATAT TCAGAGTTTT AGGAGAATTG CAATGA
|
|---|
| Protein sequence | MGDNFRIHNG KPGIIESVNR IIRDATTKHA SDIHIDINSR EFNIRYRIDG VLEKAEKFSF
DNEKLEVISR IKIISGMNIA EKRLPQDGSI NIVINNRKYD IRVSSLPTVD GESLVLRILQ
NEEKITDFES LGFRGKSFSN IKKLINKNHG LVLISGPTGS GKTTTLFSII NKLNDKSKKI
ITVEDPVEKK LKGITQIQVK EKIGLTFLEG LKHVLRNDPD IIVIGEIRDK ETAEIAVKSA
LTGHLVIATI HTNDSLSTIF RLMDMGIPEY LILNSLNGVI AQRLVRKICV KCCGQSCPSC
NSGYSGRINI NEILVFDDGV HELFRKTNSL GEIKNKIKET GFRDMLDDAL EKEKEKIINK
EEIFRVLGEL Q
|
|---|
| |