Gene Sterm_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0624 
Symbol 
ID8596108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp675884 
End bp677728 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content37% 
IMG OID 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003307428 
Protein GI269119251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000168904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGTG TGACTTCTAT AGAAGAGTTA AATACTTTAA AAGACAGTAT TAATAAAGGC 
AGAAAATACA GCAAGCAAGT TCTTATATGC GGTGGAACAG GTTGTATTTC CTCAGGCAGT
AATGATATAG CTGCTAAAAT GGAAGAAAGA GTGAAAGCTC TGGGAAAAGA AGATGAAATA
AGAGTAATAA AAACAGGATG TTTTGGGTTT TGTGAAAAAG GTCCGATAGT AAAAATGCTT
CCTGATAATA CATTTTATAC AGAAGTAACA CCTGAAGATG TGGATAAGCT GGTAGATAAA
CATCTTATAG GTGATGAAAA AGTAGAGGAG CTATTATATG TAGATCCTGT TTCTAAAAAG
AGAATAAGTG ATTCAGATCA TATGGATTTC TACAAAAAAC AGGAAAGAGT AGCTTTAAGA
AACTGCGGAC TGGTAGATCC GGAAGATATT GATGATTATT TTCTGCATGA CGGGTATACA
GCGCTTCATA AAGTAACTGG AATGGAGCAG CAGGCAGTAA TAGATATTAT AAAAAATTCA
GGTCTTAGAG GAAGAGGCGG AGCCGGTTTC TCGACAGGAA TGAAGTGGCA GTTTGCACTA
AATAACAAAG CAGATCAAAA ATATGTAGTA TGTAACGCCG ATGAGGGAGA TCCGGGAGCA
TTCATGGACA GATCAATCCT CGAGGGAGAT CCGCATTCTA TAATAGAAGC TATGGCAATC
TGCGGATATG CTATAGGAGC AACTAAAGGT CTTGTATACA TAAGAGCAGA GTATCCTCTG
GCTATAAAAA GACTTAAAAT AGCTTTGGAA GAAGCAAAAG AAAGCGGAGT TTTAGGAACA
AATATATTTA ATTCAGGTTT TGAATTTGAT ATTGAAATAA AATACGGTGC AGGAGCATTC
GTATGCGGTG AAGAAACAGC ACTTATCCAT TCAATGGAAG GACACAGAGG AGAACCTACA
ACAAAACCTC CGTTCCCGGC AGAGCACGGA TATAACGGAT ACCCTACAAA TGTTAATAAC
GTAGAAACTC TGGCAAATAT ACCTGTTATT ATAAACAAAG GAGCAGACTG GTTCAAATCA
TTCGGTACAG AAAAATCATC AGGAACAAAA GTATTTGCTC TTGCAGGAAA AATAAATAAC
GTAGGACTTA TAGAGGTACC TATGGGAACT ACTTTGAGAG AAGTTATTTA TGAAATCGGC
GGAGGAATCA AAGACGGGAA AAAATTTAAG TCAGTTCAGA CAGGAGGACC TTCTGGAGGA
TGCCTGACTG AAAAACACCT TGATGTAGCA ATAGATTTTG ACAGTTTGAT GGAACAGGGA
TCTATGATGG GATCTGGCGG AATGATAGTT ATGGACGAAG ATGACTGTAT GGTAGCAGTG
TCGAAATTCT ATCTGGAATT CACAGTAGAA GAATCATGCG GAAAATGTAC TCCGTGCAGA
ATAGGAAACC AAAGACTTCT TGAAATACTG GAAAAAATAA CAAAAGGAAA CGGAACGGAA
GATGATTTAA GAAAATTAAA AGAACTTTCT AACGTAATAA AAGATACTTC ATTATGCGGT
CTTGGGCAAA CAGCGCCAAA TCCGATATTA TCTACATTAA ATAACTTCTG GGATGAATAT
GAAGCACACG TAAAAGATCA TAAGTGTCCT TCAGGTCAAT GTACTGCACT GCTGAAATAT
GTGATAAATG ACAAATGTAT AGGATGTACT GCCTGTGCGA GAGTTTGTCC GGTATCATGT
ATAGAAGGAA AAGTAAAAGA AAAGCACGTT ATCGAGCAGG ATAAATGTAT TAAGTGCGGT
GCATGTTATG ACAAATGTAA ATTCAGTGCA ATAGACAGAA TATAA
 
Protein sequence
MSRVTSIEEL NTLKDSINKG RKYSKQVLIC GGTGCISSGS NDIAAKMEER VKALGKEDEI 
RVIKTGCFGF CEKGPIVKML PDNTFYTEVT PEDVDKLVDK HLIGDEKVEE LLYVDPVSKK
RISDSDHMDF YKKQERVALR NCGLVDPEDI DDYFLHDGYT ALHKVTGMEQ QAVIDIIKNS
GLRGRGGAGF STGMKWQFAL NNKADQKYVV CNADEGDPGA FMDRSILEGD PHSIIEAMAI
CGYAIGATKG LVYIRAEYPL AIKRLKIALE EAKESGVLGT NIFNSGFEFD IEIKYGAGAF
VCGEETALIH SMEGHRGEPT TKPPFPAEHG YNGYPTNVNN VETLANIPVI INKGADWFKS
FGTEKSSGTK VFALAGKINN VGLIEVPMGT TLREVIYEIG GGIKDGKKFK SVQTGGPSGG
CLTEKHLDVA IDFDSLMEQG SMMGSGGMIV MDEDDCMVAV SKFYLEFTVE ESCGKCTPCR
IGNQRLLEIL EKITKGNGTE DDLRKLKELS NVIKDTSLCG LGQTAPNPIL STLNNFWDEY
EAHVKDHKCP SGQCTALLKY VINDKCIGCT ACARVCPVSC IEGKVKEKHV IEQDKCIKCG
ACYDKCKFSA IDRI