Gene Sterm_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0604 
Symbol 
ID8596088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp654326 
End bp655039 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content35% 
IMG OID 
Productprotein of unknown function DUF328 
Protein accessionYP_003307408 
Protein GI269119231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0200357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA TACTATCTCC GAGTAAAACA CAGAAAATCA AAAAAATAAA TGGCTTTGAT 
CTAAAAGATA TAATGTATGG AGAGCATACA GCCGGACTTG TAAATATTCT AAAGGGTCTT 
TCAGGCAAGA AACTGAAAAG AATAATGAAG ACGAGTGATA AATTAACAGA AGAGATACTG 
GACACTTATT GTAATTTTTA TGAAAATGAA CGCGGACATG CAGCAGCGAG CTATACAGGT 
GTTGCATTCA GGGCACTGGA CACGGAAAAC CTTTCGGATA AGGATATTGA GTATTTGGAA 
AAGTCTGTGG TAATCCTGTC AGCCTTATAC GGAGTACTGA CACCTCTGAC TGGAATACAG 
CCTTACAGAC TGGACATGAC CATGTCTGTG CTGGACAAAA AGTCACTATA TGAATACTGG 
AAGGAATGTA TTGATAAATA TTTTGAAAAA GAAGACTTGA TAATAAATCT TGCTTCAAAG 
GAGTTTTCAA AAATGATAAA AAAACCTCTG ACAGATATAG AATTCTACGA AATGAAAAAC 
GGAAGTCCTG TTCAGGTAAG TACGAATTCC AAAAAAGCAA GAGGTGAGAT GGCGAGGCAT 
ATAATTACAC AAAAGATATC ATCAAAAGAA AAAATAAAAG AGATTAGTTT TGGCGGTTAT 
AAATTTGATA AAAATGCTTC CGGGGAAAAC AAGCTTGTTT TTATAAAGAG TTAA
 
Protein sequence
MKIILSPSKT QKIKKINGFD LKDIMYGEHT AGLVNILKGL SGKKLKRIMK TSDKLTEEIL 
DTYCNFYENE RGHAAASYTG VAFRALDTEN LSDKDIEYLE KSVVILSALY GVLTPLTGIQ 
PYRLDMTMSV LDKKSLYEYW KECIDKYFEK EDLIINLASK EFSKMIKKPL TDIEFYEMKN 
GSPVQVSTNS KKARGEMARH IITQKISSKE KIKEISFGGY KFDKNASGEN KLVFIKS