Gene Sterm_0580 details

Gene Information

• Locus tag: Sterm_0580
• ID: 8596064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 634013
• End bp: 634720
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 37%
• Product: MotA/TolQ/ExbB proton channel
• Protein accession: YP_003307384
• Protein GI: 269119207

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00547042
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTAG TAAATTATTT AATTGTCGGC GGTATTTTCA TGTGGCCGAT ATTGATGGCT 
CTGGTATGCG GAATGGCAGT GCTGCTGGAG AAAACATGGT ATTTTCTGAA AAATGAAAAA 
GACATGACTG ATAAGTTTAA GAAAAATCTT ATAAAACTTA TTCAAAACGG AAATAAAAAA 
GAGATTATAG ATTTTTGCAG TACAAAGAAA AATTCCGTTG CCAAAACAAT AAAAAATACT 
CTGGAAACAT TTGAAGAAGA TGAAGGGGGA GATTTTGACC CGCGTTATCT GGAAGAAATA 
GCCAAAGAAA CTACTCTGGA ACAGATTACC AGACTGGAGA AGGGAATGTG GCTTTTGAAT 
ATAGTGGCAA CTGTATCACC TCAGCTTGGA CTGCTTGGGA CTGTAACAGG AATGATAATG 
GCATTTAAAG GTCTTTCGGG AGCAGGCGGA GCTGATTCGA CAATAATAGC GGCAGGGATA 
TCAGAAGCTC TTTATACTAC AGCTTTTGGT TTGATAGTAG GAATTCCGGC ACTTATTGCA 
TATAACTTTT TTGACAGAAG AATAGACAGT GTACTGATAG AAGTGGAACG AATGACTGTA 
TATCTTACGA ACAGCATGCA GAATAAAAAC AACGGAATAA AAAATTCCTA CAGAGTTTTT 
AATCAAGGAG AAGTCTATGA GAAATATGAG ACGCAGAAGA AGAACTAG 

 

Protein sequence

MKVVNYLIVG GIFMWPILMA LVCGMAVLLE KTWYFLKNEK DMTDKFKKNL IKLIQNGNKK 
EIIDFCSTKK NSVAKTIKNT LETFEEDEGG DFDPRYLEEI AKETTLEQIT RLEKGMWLLN 
IVATVSPQLG LLGTVTGMIM AFKGLSGAGG ADSTIIAAGI SEALYTTAFG LIVGIPALIA 
YNFFDRRIDS VLIEVERMTV YLTNSMQNKN NGIKNSYRVF NQGEVYEKYE TQKKN