| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0561 |
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| Symbol | |
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| ID | 8596045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sebaldella termitidis ATCC 33386 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013517 |
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| Strand | + |
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| Start bp | 606050 |
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| End bp | 612892 |
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| Gene Length | 6843 bp |
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| Protein Length | 2280 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_003307365 |
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| Protein GI | 269119188 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA ATAAGAAATT ATTAGTATCA TTTCTAGCAC TGAATGCGAT ACTAACATCT
TATGCACAGG CAGAAACAGT ACAATCGGCA AGATATGAAC GAATGTATAA CAGTATAGTA
AAAAATATGG AAAAAGGAAG TCCAAACGAG CAGACCTACC AGACGATACA GAGAATACTG
AATCAAAAAA ATAAAGAATT AAAGGATTTG TATTTACAGG GAGATTATAT AGTAAAGCCG
GAATATCTGG AATGGCAGGT ATTTTTTACA GGGTTTTATG AAGAATATAA TGAAGGAGTG
GATAATTCCA AGGAGAATGC AAAATATCAC TCAAAGGTAA CAGGATATTA TGATGCGAGC
GGGAATTATG TGACAACGAG CGGTAGCATA AGCGGACTGT CAGGAAAGCC TTATCAGCCG
CTGCAGCAGC CGAAGGATAT TAATTTAGGA GTGAGTATTC CGTTGAAAGG GTTGACAAGG
GAGCCTATAA ATCTTAATTT GACAGGAGTT TCGGGTCCAA GCTTTAATCC GATATACTCA
ATACCGAATG ATCCTACTAA AACTATTACT GCTAATGTAG ATGTAGATAC ATTTTCGATA
AATATACCGG TAATAACTAT TCCGCCAGTA CCAACTATAC CGTCATTTTC TGTTACAGTT
CCAAGTACAG GAAATGGTGA TGACAGTTTT AATAGCCTGG GAAATGCCAG TACATCGGAT
CCTGGAGGAA TAACATCATT TGTAGGGAAT TATAATTTTT CAGATGGGGA ATTATCAGGA
GTATGGAATA CAAATGGTAA TATATCGTCA TATTCATATG ATAATCTTAC AGGAACATCT
AACTGGAGGT CAGGATCAGA TTCGATGTCC AGTGCAACAA GTTCCGGTAC GATAAATGTA
ATAGGTAATG TACCAGCTTT ATATGAGATT ACAGGTGCTG ATAATGTAAC TTTTGGAAAT
AATTTTAAAA TAAAGATTAC TAGTAATGTT GCAACTGGTT ATACTGGAAC ATTACCGCAT
CTTATTCAGT ATGATCCTCA TGGGACAAGA AGTACTTACA AACCTTTTCC AACTGATTAT
TACGGAAACG CACCAACAAC ATCTACAATA TGGGACTCAT ATGGAGAATT AGTAAATAAG
GGTACTATAG AAGGTGAAGG GAATTCCCTT TTGATGATAA GTCTTCAAAT GCATGGAGGA
AATTTTAGTC CAACTGTTAA AAATGAGAAT ATAATTCGTG GATTATATGT AGGTGGCGGG
TATGGTGGTA ATGGTGGTGA AAGACACGTA GCCTTTTCAT TTACTACAGC TAGAAATGGA
ACAGCAACAG ACGACAGAAG ATTAGAGTTT TATAACAGAA GTACCGGAAA GATAGAAATG
CAGGCACGAG AAAGTATTGC ACTTAATTAT GCCAATCAAA GTAAAGGTCA TTTATCAGTA
TATAATGAGG GAGATATTGT TTTATATGGA AATAGTAGTG TAGGAATAAA AACTGCACAA
GCAACAGCTA ATACTTTGAC TACTTCAAAA ATTGTATTAA AGACTCCGAT TAGAATAAAT
GGAGATTCCA GTGTAGGTGT GGAATTAGCA CAGGTGATGG ATGACGGGTA TGATACAAGT
GCTAATCCGT CATATATAGC CAACACTTAT GATAAACAGC CAGCAGAAAT AAGAGTAACT
ATAGGTGATG AGGCAAATCA ATATGCAGGA AATATATCTG GGATAAATCC AAGTACATCA
CTGCCGTATG ATTCCAATTT TGTGGAAGGA GCAGTAGGAT TATTTGTAAA TCATGCGTCA
TTAGATTATA GATTAAAGGA ATATGAGCTT AAATTTGGAG ATTATGCTAA AAATAGTGTT
TTGGCATATA TAAATAATGG AAAATTGACA CTGGATAATA TAAAGTACCC TACAATTAAT
ATAGAAAATG GTGCAGATAA TGTAGGTCTT GTTGTTACTG GTACAAGCTC TGAATTAAAT
CTGTACCCTG ATATAAAAGT AGGAACTGCT TCTTCAGCAG TGGACGGAAC AGTAGCATTG
ATAGCTAAAG CCGGAAGTAA AGTAAATCTG CTGGGGGCTA ATACTATAGA AACAAATGGG
GAAAAATCTC ACGGATTGGT AATTCTTGAT ACAGGAACAA CATTGAGTAC AGGAACTGTT
ACAGGAGGAA GTTATAACTT CAAAACAGCA GGAGAAAGCA GTGCTACACT TTATGTGAAG
GATGGGACAT TGAATCTTGG ATCTGCCAGT AACATCAATA TTTCTGCTGT CGGTAATAAA
TCAATAGGTG TGTATAACAA CGGCGGAACA GTTACCTTAG GAGCTGCCGC AAGTACAGGA
ACTTATGAAG TAGGTACAAA CGGAGTACTT TTATATAATT CAGGCGGAGG GACTCTCTCT
ACTGCAGGGT CTAGCTTTTC TGTGGGAAGC GGATCAATAT TCTCTATAGC TAGTGGAGCA
GGAACAACAA CTAACTTTAC AAGTCCAAGT ACATTAAATC TGCTGTCAGG GTCAACAGGA
TTCATAGTAG ACGGTGCATT AGGAATTCCT ACTTATTTTT CTACATATTA TACAGGTTTG
AATACTAATA TGGATGTTGT ACTTACATCA GGAGCTACAT TAATAGCTCT TCAGAATGCT
AATTCGACTT TGTCATCTCT GAGCTTTGGT TCGATAGGAT CGAATTTTAA AAGTGTAACA
TTAAACGGCG GAAATATGGC TTCACTTTTG GAAGGAACAC TTACAATTGA TCAGAATGTA
AATCTTGACA ATGCTGCAGA TGCATATAAT ACAATTGAAA AATCACTTAT AGGTCTTACT
GTTAATGCCC CTGTTACTAT CACAGGAACA CAGGCAAATC AGGTAGGACT GGCAGATAAT
TTTTCTTCTG TAACAGCAGT GACATATAAT AATATGATAA ATAACGGGAC AGTAAGCCTA
AGCGGAAATG GTTCCGTGGG AATATATACA AATAACGGGA ATGCAACAAA CAACAATGTT
ATTTCTGCTG TCGGAGCAAA CAGCTTCGGA ATATATGGAG AAAACGGAAC AACTACGTTA
AATTCAGGAA CAGGAAATAT AACAGTAGGA GATCAGGGAA TAGGTATATA TGGCGTAAGT
TATCAGAATC CTGCTGCTCC GGGACTGCAC GGCGGAGGAA CAATAAATAT ATCAAATGCA
GGAACTATCA CAGGAAACGG CGGTTCAGGA ACAATAGGAA TATACTCGCA TGTAAATAAA
GCCGGAGGAT TAAAGACTGA TGCCTCAGTA ACATTAACAG GGGGAACAAT AAATCTTGGA
AGTGTTACGG GAGCAATAGG GGTTTATGTC AATAAAGGTC AGGTAACTGA TGCAGGGTCT
ATAATAACAG TAGGAAATAA CGGAATCGGA ATTTATGCCA AGGATGCAGA TCTGAATCTA
AACGGGACGA CTATAAATCT TCATGGAAAT AATGCTTTAG GTATGTATTT GGAAGGAGAT
ACAAATTTAT TCACGGGAAA TGGAACTATA GATATAAACG GGCAGAATGT GGTGCTGTTT
TATATGGATA CAGCAGCAGG AAATACAATA AATAATAACT TTGTGGTTAC TTCAACAGCA
GGTTCTACAT ATACTCTGGG TAATATAAAA GGCGGAGCTT TTGAATATAC TGGAAACAGT
GTGCTTGCTT CAAACGGAAC ACTGGTATCA GGACAAAACT CAGCAGTTTA TCTAAACGTA
TCTACAATTA CCGCACCGGG AACAACAAAT GTAGCAGCAG TTTCACTTAA CGGTCAGTAT
AGTGGAGGGC TTCCTGCCGG CATGACTCTG GGAATGGACG GAGAAAATAA CGGAAGTATT
GCATTGGAAG ACAGCTCAGT AGGAATATAC GGTAAAAATG GATCAAGAAT AAGTAACAGA
GGAACTATAA CAACAGGTAA CAGCTCGGCT GGATTAGTAA CATCAGGACT AAACTCGGAA
GTAAAAAACA GCGGATTAAT AACAATGGGA GCAGCTTCAC ACGGAGTTTA TCTGCAGGAC
GGGCTTATAG TACAAAATCA GGCATCTGGA AATATATTAA GTGCAGGAGC AGGGTCTATA
GGGATGTTTG CTGATAATAA TGCCGCTACA GTAATGCAGG TAATCAACGA TGGTAATATT
GACCTTACAG GTGACGACTC ATTGGGTATA TATGCAACAG GTACAAACAG TCAATTAATA
GACAATAATT TGGGAGCATC AATAAAGGTA GGGAATTCTA CAAATGCTTC AGATCCCGGT
ATAGGAATAT ACAGCGGTGC AGCAGGAAGT ACTGTAAAAA ATGACGGAAC AATAACTTCT
GGAGTAAATT CTATAGGAAT TTATAATAAT CAGGGGACTA CAACTATAAA TGGTACAGCT
GTACATAATA TAGATAATTC AGGAGTAGGA ATATATGCTA CAGGAGGAAT TGTTAATTTA
AATTCAGGTT CTGCATTTAA TATGGGAACA AACGGAGCAG TGGCAGTATA CGGAATAAAT
TCCGGAGTAA CTAATTCAAC AAATCTTAAT ATAGGAAACA GCAACTACGG ATATATTCTA
AAAGGCGGAT CACTGACAAA TGCAGCAGGA ACAAGTGCAT CTATGGGAAG TGACTCTGTG
TATATGTACA GTACAGAAGG AACAACGGTA ACTAATGACG GAACTTTGAT AATGTCAGGA
GCAGATAACG TAGGCTTCTA TATGGCACAG GATCCGACAA GCGGAGCAGG CGGAGCTATC
ATGATTAATA ATGCTGGAGG TAATATTTCA GGAACTGTAG GGAATAATAA TGTCGGAATA
TATAATTATG GCGGTACAGT GGATAACTAC GGTAATGTGG CTGTGGGCGA TTCGGATATT
GAATTTATAA CAGGGACTAC AGATGTAGAT GTCAAAGCCA GCAAGTATTC AGTTGGGATT
TATGGAGAAA ATGCAACAAT TATAAACCGA GCAGGAGCTA ATATATCAGC AGGCTACGGC
GGATATGGAA TAGTGGCTAA GGGCGGAGCT GCGAGCAACT TTGGAACAGT AACAACTACA
GGTGATTATT CTACGGGTAT GTATACAGAA AACGGAGTAA TAACAAATGA ATCAGGCGGA
ATTATAAATG TTTCAGGTAA TAATACAATA GGAATGGCAG GAAAAGGAGC CGGTTCACAT
ATAATAAACA ATGGAGTAAT TAACATAACA GGTAATGACG CAATAGGTAT GTATGGTAAT
CTTGGAACAG TAATAACGAA TACAGGGACA ATTAATATAA CAGGGCTAAA CAGCCAGATA
TTCGTATCAT CAGATCCAAG TGATGCTGCA CATACAGTAG GAGCAGGAAC AGCTACTATA
AACGGAGGAA CTGCAGCAAA TGTAATAAGC TCAATAGGAA ATGTTCATGC CCTTCCTGCA
CTGATAAATG CTGGAATCAT AAAATCAAGC GGTGTACTGG CATTAGATGG TGTACAGGTA
ATGATAAAAC CAGACCCTAC AACAAAACAG CCGTCATCAG ATCCTAATTA TGATTTTGAA
TTATCTGGAA CATCAATAAT AGCAGATGAA ATACTGACAT CAAAGCCGAT AGTAATACTT
CCCGGATTTG CAGACGGTAC AAATGCTAAT GTATATAAGC TGGAAGGATT AATAAAGGCA
TCATCAGGAC AGTATGATTT CATAAGCGGA TCGTTATTAT GGGAAGCAAC ACCAAAAGCA
ACAGGAACAG GTTCAGATGT ATATATGTCA AGAAAAGCAT TTACAGATTT CACAGACGGA
TTATGGTTTG AAGACTTCGG AACAGCTTTG GAAAATAACT ATCTGACAGC AACAGGCGAT
GGAGTAACAA TATATAATAA GACAGGCTAT ATAACAAATG AAACAGATTT CAGACATATA
ATGGGAAGTC TTGCAGGAAA TGTATATGCT AATATAAACC AAAGAGAAGA CGACATAGCC
AAAACATTTG AAAATTCATT GCATTTATTA CAGGATTCAA CAAATAATAC AAAAGAAAAT
GTAAAAATAA GTGTAATAGC AGGAAAAGGT AAAAATAAAG AAGAAACAGA CGGTGTAACA
GGGTATGACT ATACAACAAC AGGAGTACTT GCATTAAGAG AAGTGGAAAG AACATATAAA
CATACATTCG GATATTCATT AGGATATGTT CATACAGGCT TTGAATTCAA AGACGGAAAT
GAAAGTGAAG AATGGGTAGA TACAATCCAG CTTGGAGTAC ATAATAAGTA TAGATCAAAT
GGATGGAAAG TAGTAAATGA CCTGACAGGA AGAGCAAGTA TCCATAATGT GGACAGAAAT
ATAGACTGGC CTTCACCGTT AGAAAGATCA GAAATGAACG GAACATATGA AACATACAGT
ATAACAAGTG ACAATATACT AGGGAAAGAA TTCGGATTAG GGAAAAAAGC GAGTATAATG
CCATATGGAG CATTCAGAGC AATGTATGTG ACAAGACCTA CATTTAATGA AAGCGGACTG
GAAGCCCTTG AGGTGGAAGG AAATGATGCA TGGAGTGCTA AGCCTAGAGC CGGGGTAGAG
CTGAAAGGAG CAATACCTTT AGGAGCTAAG ACAGCATGGC AGCTGAAAGG AACACTTGAC
CTTGCATACG AATATGAGCT TGCAGACCTT AATGAAAGAG AAAAGGCAAG ACTGATAGCC
ATAGAAGACG GTTATCATAA ATTATCGAAG CCGGAAGATG AAAAAGGAAC ATTCAGAACA
AAAGCGGCAA TAGGAGTAGA GGTAGAAGAC AGATACGGAA TATTCCTTAC AGGAGAGTAC
TCAACAGGAA ATGATAAGGA AAATGATTAC AGAGCAGGAG TAACTTTAAA GGCAGTATTT
TAA
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| Protein sequence | MKRNKKLLVS FLALNAILTS YAQAETVQSA RYERMYNSIV KNMEKGSPNE QTYQTIQRIL
NQKNKELKDL YLQGDYIVKP EYLEWQVFFT GFYEEYNEGV DNSKENAKYH SKVTGYYDAS
GNYVTTSGSI SGLSGKPYQP LQQPKDINLG VSIPLKGLTR EPINLNLTGV SGPSFNPIYS
IPNDPTKTIT ANVDVDTFSI NIPVITIPPV PTIPSFSVTV PSTGNGDDSF NSLGNASTSD
PGGITSFVGN YNFSDGELSG VWNTNGNISS YSYDNLTGTS NWRSGSDSMS SATSSGTINV
IGNVPALYEI TGADNVTFGN NFKIKITSNV ATGYTGTLPH LIQYDPHGTR STYKPFPTDY
YGNAPTTSTI WDSYGELVNK GTIEGEGNSL LMISLQMHGG NFSPTVKNEN IIRGLYVGGG
YGGNGGERHV AFSFTTARNG TATDDRRLEF YNRSTGKIEM QARESIALNY ANQSKGHLSV
YNEGDIVLYG NSSVGIKTAQ ATANTLTTSK IVLKTPIRIN GDSSVGVELA QVMDDGYDTS
ANPSYIANTY DKQPAEIRVT IGDEANQYAG NISGINPSTS LPYDSNFVEG AVGLFVNHAS
LDYRLKEYEL KFGDYAKNSV LAYINNGKLT LDNIKYPTIN IENGADNVGL VVTGTSSELN
LYPDIKVGTA SSAVDGTVAL IAKAGSKVNL LGANTIETNG EKSHGLVILD TGTTLSTGTV
TGGSYNFKTA GESSATLYVK DGTLNLGSAS NINISAVGNK SIGVYNNGGT VTLGAAASTG
TYEVGTNGVL LYNSGGGTLS TAGSSFSVGS GSIFSIASGA GTTTNFTSPS TLNLLSGSTG
FIVDGALGIP TYFSTYYTGL NTNMDVVLTS GATLIALQNA NSTLSSLSFG SIGSNFKSVT
LNGGNMASLL EGTLTIDQNV NLDNAADAYN TIEKSLIGLT VNAPVTITGT QANQVGLADN
FSSVTAVTYN NMINNGTVSL SGNGSVGIYT NNGNATNNNV ISAVGANSFG IYGENGTTTL
NSGTGNITVG DQGIGIYGVS YQNPAAPGLH GGGTINISNA GTITGNGGSG TIGIYSHVNK
AGGLKTDASV TLTGGTINLG SVTGAIGVYV NKGQVTDAGS IITVGNNGIG IYAKDADLNL
NGTTINLHGN NALGMYLEGD TNLFTGNGTI DINGQNVVLF YMDTAAGNTI NNNFVVTSTA
GSTYTLGNIK GGAFEYTGNS VLASNGTLVS GQNSAVYLNV STITAPGTTN VAAVSLNGQY
SGGLPAGMTL GMDGENNGSI ALEDSSVGIY GKNGSRISNR GTITTGNSSA GLVTSGLNSE
VKNSGLITMG AASHGVYLQD GLIVQNQASG NILSAGAGSI GMFADNNAAT VMQVINDGNI
DLTGDDSLGI YATGTNSQLI DNNLGASIKV GNSTNASDPG IGIYSGAAGS TVKNDGTITS
GVNSIGIYNN QGTTTINGTA VHNIDNSGVG IYATGGIVNL NSGSAFNMGT NGAVAVYGIN
SGVTNSTNLN IGNSNYGYIL KGGSLTNAAG TSASMGSDSV YMYSTEGTTV TNDGTLIMSG
ADNVGFYMAQ DPTSGAGGAI MINNAGGNIS GTVGNNNVGI YNYGGTVDNY GNVAVGDSDI
EFITGTTDVD VKASKYSVGI YGENATIINR AGANISAGYG GYGIVAKGGA ASNFGTVTTT
GDYSTGMYTE NGVITNESGG IINVSGNNTI GMAGKGAGSH IINNGVINIT GNDAIGMYGN
LGTVITNTGT INITGLNSQI FVSSDPSDAA HTVGAGTATI NGGTAANVIS SIGNVHALPA
LINAGIIKSS GVLALDGVQV MIKPDPTTKQ PSSDPNYDFE LSGTSIIADE ILTSKPIVIL
PGFADGTNAN VYKLEGLIKA SSGQYDFISG SLLWEATPKA TGTGSDVYMS RKAFTDFTDG
LWFEDFGTAL ENNYLTATGD GVTIYNKTGY ITNETDFRHI MGSLAGNVYA NINQREDDIA
KTFENSLHLL QDSTNNTKEN VKISVIAGKG KNKEETDGVT GYDYTTTGVL ALREVERTYK
HTFGYSLGYV HTGFEFKDGN ESEEWVDTIQ LGVHNKYRSN GWKVVNDLTG RASIHNVDRN
IDWPSPLERS EMNGTYETYS ITSDNILGKE FGLGKKASIM PYGAFRAMYV TRPTFNESGL
EALEVEGNDA WSAKPRAGVE LKGAIPLGAK TAWQLKGTLD LAYEYELADL NEREKARLIA
IEDGYHKLSK PEDEKGTFRT KAAIGVEVED RYGIFLTGEY STGNDKENDY RAGVTLKAVF
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