Gene Sterm_0512 details

Gene Information

• Locus tag: Sterm_0512
• ID: 8595998
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 562547
• End bp: 569179
• Gene Length: 6633 bp
• Protein Length: 2210 aa
• Translation table: 11
• GC content: 36%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003307318
• Protein GI: 269119141

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA ATGAAAAATT TCTAAAAACA TTTTTAATGT TAAATGCAGT GATGACAGGG 
GTTGCTGCTG CTGGTACAAA TAATGTAAAA TATGAAAAAA TGTACGAAAA AATGACAAAA 
AATATAAGCA CAAATAAATC AAATAAAGAT AATTATCAAT TAATAGAACG AATACTTAAT 
CAAAGAAATA AAGAATTAAA AGATTTGCAC TTACAAGGAG ACTATATAGT AAAACCAGAG 
TATCTGGAAT GGCAGATATT TTTTAATAGT TTTGCTGATA AGATCAAAAT AAACGGAAAA 
CAGGAAAATG CTGTTACATA TAATGAAGAC CGTGTAAAAA GCGTAAACTT TGCAATGATG 
CTGCCAATAA AAGGAATTCA GGATAAGAAT ATTAGTCTAG ATATATCAGC AATACAGCCG 
CCGTATATCA CTCCATCAAT CAGCGCGGTA AATCCTGTAG CAATGACTTC ACCGACAATA 
AATCATGACA GTTTTACATT ACCGGCAGCA CCGGCTCCAA AAGCACCATA TTTTGGTACT 
GGTTCACAAT CATATAATAC TCCGGTAGGA AAACTAACAT CAAATGTGGT GTATAATACT 
ACAGGAAACG CTGTATATGA AAACTTAAAT GTCAGCTCAA GTGCAGCAGG TACAGAAATT 
CTTGTGAAAG GTACAGTAAC TGATATTACC GGGACAGCAG ATTATGAGAA CGGCCTATAC 
AGCGGGACGA CATCTGCCCT GACTTCATAT ACACACAGTT TTGCAACGTT TGATGTAATA 
AATATCGGAA ATAATGGAAT GTTCGAGGTA AAAGGCGACT GGACTTACAG ATCAAATTCA 
GTGATCAACG GACACACCAG TTATGGTTTT TTAAGCTACA GACCTTATTA TGTAAATACA 
GACAGTCAGG TGACTTTTTC CGGAAATTTA GCATTGCGTA ATAAAGCCAA CTATGTCAAT 
GGATCAGCAA CCGGAATGGT GGGACTCAGT CTAAATGCAG ATAATGTTAC ATCGAATCCT 
ACGGGGAAAG CAACACTGGA GAATAAAGGT ACTATCACAC TGGGGGTTTT AGATCCCGGT 
GATTCATATT ATCGTATGGT GGGGATGCAG CTGGAAAGCG GAAGCACGTA TAAAATAGAC 
AGTGAACTTA TCAACAGCGG AACTATAATT TTGAATTCTA ATTATACATC GAGCATGGCG 
GGGATGCAGA TTAATCTTAG CAATGACAGC AGATATACAG GTAATTCACT GGTAAAAATC 
GGAAATATAA AGATGAAAAG TTCTGGAGAA AATTATACAA GTGCAATTGG TGTTATATTC 
GGTCATACTT CAAATTTAGG TCTGGTGGAT TCTAATGTGA TAGTAGATGG TTCCGGAGGG 
CTGATAGATA TTGAAGCATA TTTGGGGAAT GGAATACAAA TAAATAGAGT CAATAAACCG 
CAGAGTTCTA ATAACGGAGT GGAAAATTTT AAAAACCTGA ATATGTTAAT AAATGGAAAA 
AGTATAATAG GAATATCAAG AAGTACAAAT AATGCAGCTG AAAATGCAGT AGATATGATT 
ATGACAGGAG ATGTCATCAG CAGTATAAAA TTTGGTCCAA ATTCAGTTGA AAGTACGATG 
TTTATGCCTG TAAGAGATGT AATTATTCTT GATGCCAGTC TGAAAGACTC TGTGGGTGTG 
ATAAATGAAG GAAGAGGTAA TTCAGTAGGA TATATTTATA CAGCAGCTAC AAATGCAACT 
GCAAATTATG CCACACTTAA AAACTATATG CCGATAGAAA TAGGATCCGG AGCAGAAGCC 
ATGACGGCTT TAGGCGTGAG AGTGGCAGGA ACAGTAGAAA ACTACGCAGA TATAATAAAT 
AATTCCTCGC CTTATACAGA AAGCGGAGTA GTATATGGAG CTAAAGGACT GGTTTCAGAT 
CTGAATCAGG CCGTAATGAC AAATTATGGA AATATTGATA TGAACGGAAA AAATGCCACA 
GCTTTTTATA ATGGCTTTTT GTTGAATTCT GCCAGTGATC ATACAGTTAT TAATAATGAA 
AAAGGAATAG TAATATACAG TACGGCAAGC CATAGAGGGA GCTCGCTCGG GTATGTGGCA 
GGAGAAAGTA ATGTATCTGC CAATAAACTG GAAGTTAACG GCTCTGATGG TGTTGTTGCC 
TTTTCGCACG GGGGAAATAT TACGCTGTCA CCTTTAACAG CGGGTGGAAC ACTTGAACTA 
ACTGCTAACG GGGAAAATAC TTATGCTTTT TATCATCAAA AAGGTGGAGG AAATATAGCA 
GGAAAAATAA AAATAAACGG TACAATAAAT GCCAATGTGA AAAACGGAGG GATAGGACTT 
CACTATACAG GAACGGGAGT TACTGCAGCT CCGGTGAATC TTGGGACTGA ATTGGCTACA 
ATAATAGATT CTTCAGGAGG AACTTTAAAT ATCATTACAG ATTCGGATAG CTATAATTTA 
ACCTTGAAAA ATACAACAGT TAATCTTTCT AATTTGTCAA ACCTGAACTT TGATAATGTA 
ACTTTTACTC CTGATGCAAA AACAAAGATG TATGACGGCG GTCTTTTTGT AGACATAGAC 
TCTAACATAG ATAAAAATAA CAATACAGGA AGTAAAGCAT ACAGAAATAC AGGGATGAGC 
GCATCAAATG TAACTGTAAA CTCCGGTATA ACAATAACAG GAACTGAAAA TTCGTTAACA 
GCAGTAGGTC AGGATTTTTC AGATATAGTC AGATGGGGAG AGCTTGCCAA CAAAGGTACA 
ATTTCACTTT CCGGAGATGA AAGTACAGGA ATATATGGTA AAAAGTCAAC AATAGAAAAT 
ACAGGCAGTA TAAATTTATC CGGAAAAGAT ACTACTACAA TATACAGCAT AGATTCTTCG 
GTAAAAAATA CAGGTGAGAT AAAAACCGGG GATAAAGGTG TAGGTATCTA TTCCGAAATA 
GATCCGTACA GTTTTGCGAT ACTTACTGTT GAAAATGACG GAAAGATAGA AGCCGGAACA 
GGGACAGGTG CAGTGGGAAT ATATTCCGTG TTAAAAAATA CAAATATTCC TTACTATAAT 
CATGAAACAA TTTTGAATAC AAATTCAGAT ATAGATATGA GAAAATCACA GAATTCAGTG 
GGGATATATT CTATAGACAG AAATGTAAGC GGAACTGATT CAGGAAAAAT AAGTATAGGA 
AAAGACAGTT ACGGAGTGTA TGTCAATAAT GGCGATGTCA GTCTTAATAA TCTTACATTG 
AACATATCAG GGGATAATTC TGTAGGAATT TATACAAACG GGACAGGATC ATTCTCAGGA 
AACGGAACAG TAAATGTGGA CGGAAAAGGG ATAGTTATAC TTAATATAGA ATCTACAGGA 
ACATATAATC AAAACTTTGT GGTAAATTCT ACAGCCGGTT CCAGCTATAT ATTTCAAAAT 
TTGAAAAACA GAACACTGGT TTCAAATAAT ACTGTTAATC TTGGTGAGGG CGGAACATAT 
ATAAATGCTG TGGATTCTAA CGTAACTTTG GATATTAATT CAGATTTGAA TTCTTTTAAT 
ACAGCAACAG GAAACTATGA TTCCAGAATG ATAGGTGCAG TATCTTCTGG AGGAACAGGA 
AGTATAACAA ATAAAGGAAT TATAAGTTTC GGAGATGAAT CAGCAGGATT ATATGCCAGA 
GACGGCGGAC AGATAATAAA CGAAGGAAGT ATAAGTCTGG GAGCAAACTC TGTAGGTTTA 
TACGGAGAAG GAACAGGAGC CAATATTACC AATGATATTT TGGCTGAAAT AAATGTAAGG 
GATAATTCTG TAGGGATAGT ATCAAATAAC GGGGACAGCA TAACAAGTTC GGGAAAAATA 
AACGGAACGG GTGAAAGACT TACCGGGATA TATTCTGACA GTATTAATAA TACAGTGATA 
CAGGTTAACG GTGATATAAC TCTCACGGGA AATAAATCTG TAGGAGCTTA CCTTGCTGGA 
ACAGGCCTGC AGACTTTTAC AAATAATGCT GTTATTACAT CAGGTTCCTC GAATTCTGAT 
CTGGATCCGG CAATAGGGAT TTATAATAAC GGAAGCGGAA ATAAAATAAT AAATAATAAC 
ACAATAAAAA CCGGGGATAA CTCTGTAAGT ATCTATAATA ACAGCGGAGA GATTATTCAA 
AATTCAGGAA ATATAACAAC AGGTCAAAAC AGTGTAGGTA TTTATACGAA TTCCGGAAAA 
GTCTCGCTGC TGGCCGGCAG TATGAATATA AACGGTGCGG ACAGTGTGGG AATATATGCA 
TCTGAAAATG CAGAAATAGA AAATAATCTT AGTATGACTT TTACAGATTC CAGCTACGGG 
ATAGTGGCGA ATTCAGGCTC AAAACTGATA AATAACAGCG GTGCTGTAAT AATGGGAGAA 
AGCAGTGTAT TTATTTATTC AAAGGGTGGT AATGAAGTAT TGAATAAAGC GGGTTCTGAT 
ATAACGCTTA CTGGCTCAAA CTCATCGGGT ATATATACTA CAGACGGGAC AGACATAGAG 
AATCATGGTC ATATCACGGC GGATACAGGA TTAGGGAATA TAGGTATTTC AAATAAAGGC 
GGAAGTGTAC TGAATACCGG GAATATTAAA ACTGGAGATT CAATAATAAT AGATGAGGAA 
AATACATTCC TAAATACATA TTCAGTGGGA GTATACGGAG AAAATACCAA AGGCTTTAAA 
AATACCGGGA ATATAGAAGC CGGATACAGA GGAATAGGGC TGTATATCAA AGATAATACC 
GGCGAAGCTC TGAACAGCGG TGATATAAAG TCTGATAAAG AAGGAGTAAT GGGTATTTAT 
GCTGAAAACA GTACTGTAAA AAATACCGGA AATATAACTT TATCAGGTGA TGAATCTATA 
GGAATAGCAG CTGCCAAAAA AGTAACAGCT GTAAATTCAG GTGTGATAAC TATGAATGGT 
AATAACAGCA TAGGAATCTA TGCTAATATC AGTTCAAAAA TAATAAATGA AAAAACTGGT 
GTAATAAACA TAAATGGTAA TAACAGTACG GGAATACAAT TATCATTAGG TTCGACCCTT 
GAGAATTACG GGCAGATAAA TATGGCTTCC GGAATTTACG GGTCAAAGGA TATTGCAATA 
GGTGATCAGG GGTATACACC TCCGAGTATA GTAAATGCCG GAGTTATAAT GGTAGATGAA 
AAATTTGAAA TAGACGGAAT AAATCTTACT ATAAAAGTAG ATCCTGATTC ACTGCGTCTT 
CCTACACTCG AAGAAATAAC TCTGGGAGGA TACTCGCCGG AAGACCTGAA TGCAGGATTC 
CTGATATCAA ACAGTACATC AATAAAAGCT CCAAGTTTTG ATCTTGGCGG CAATACAACG 
AAAATTGATC CGAATTTTAC ACAGGGAACT AACATGAGGG TATATAAATT CGTAAATGTA 
TTCGATCCCT CTACTCCTGA AGGCGGCCCG AATACAGGAG AAGTAGCGGT AGAAAGCGGA 
AGTCTTACTT TTGATGCTAT ACCTGTGGTT AATAAAGATT CAGGCGGAAT AGATATCTGG 
ATGGAAAAAA TTAATTATAA TAAGTTTACA CAGGGAACAT GGTACAATGA GTTTTCTGAA 
AATATTGAAT CAGGATACCT TAATGCAGCA GGAGATTCAT TGAAATTATA TGACAGGCTG 
GATCTTATAA GTACTCAGAG TGCATTGAAT AATGACTTTG AACAGCTTGC AGGGAATGTT 
TATTCAAATA TAATGCAGAG AGAACAAAAT ATAGGCAGTA TGTTCAATAA TACTCTTGAT 
ATTCTCCAAA ATTCTGAAAA TAATACAAAA GAAAATGTGA AAATAGGCGT AGTAGCAGGA 
TATGGAAGCA GGGAAGAAAA AACAAGCGGT GTTCCGGATT ATGATTATAA AACATACGGA 
GTATTGGGGT TAAGAGAAGT AGAGAGAACT TATAAGCATA AATTCGGATA TTCACTGGGA 
TATACACAGA CGAATTTTGA ATTTGATGAT TCAGACAGTA AAGACAGAGC CGATACATTT 
CAGATAGGAG TTCACAATAA ATACAGTACA AACGGATGGA ATTTTAAAAA TGATCTGCTT 
GGAAGAATGA GTATCCACAA TGTTGACAGA AATATAAAAT GGAGCGACGG AAATAAATCG 
GAATTAAGCT CTGATTATAA TGTTTACGGT GTATCATCAC TGAATAGTGC AGGCAGAGAA 
ATAGATCTGG GGAATAACTT TACTTTGGAG CCGTATGCAG GTTTGGAATT AGGTTATGCT 
GTTCACTCTG ACTTTGAAGA AAAGGACGGC ATTGAAAAGC TGAAGGTCAG GGAAAATGAT 
GCGTATTCAG TGAAACCAAG TGCAGGAATA CGTTTTGGAG TAAAAAAGGA TATAAAGGAT 
TCGGGCTGGA TGGTAAAAGG AAATCTCGGA GCAGCCTATG AATACGAACT GGGAGATATG 
AACAGACAGG AAGAAGCAAG TGTAATAAAT ATAGAAAATG GTTATCATAA ACTTGCCAAA 
GTATCAGAAG ATAAAGGGAT GCTAAAAGTA AATGCTTCCG GCGGAGTGGA GTTCAAGGAA 
AGATACGGAA TTTATGTTAC AGGTGAATAT GCTGCTGGAA ATGATGACAG GGAAGATTAT 
AAAATAGGAG TAACGTTAAA AGCTTCATTT TAA 

 

Protein sequence

MKKNEKFLKT FLMLNAVMTG VAAAGTNNVK YEKMYEKMTK NISTNKSNKD NYQLIERILN 
QRNKELKDLH LQGDYIVKPE YLEWQIFFNS FADKIKINGK QENAVTYNED RVKSVNFAMM 
LPIKGIQDKN ISLDISAIQP PYITPSISAV NPVAMTSPTI NHDSFTLPAA PAPKAPYFGT 
GSQSYNTPVG KLTSNVVYNT TGNAVYENLN VSSSAAGTEI LVKGTVTDIT GTADYENGLY 
SGTTSALTSY THSFATFDVI NIGNNGMFEV KGDWTYRSNS VINGHTSYGF LSYRPYYVNT 
DSQVTFSGNL ALRNKANYVN GSATGMVGLS LNADNVTSNP TGKATLENKG TITLGVLDPG 
DSYYRMVGMQ LESGSTYKID SELINSGTII LNSNYTSSMA GMQINLSNDS RYTGNSLVKI 
GNIKMKSSGE NYTSAIGVIF GHTSNLGLVD SNVIVDGSGG LIDIEAYLGN GIQINRVNKP 
QSSNNGVENF KNLNMLINGK SIIGISRSTN NAAENAVDMI MTGDVISSIK FGPNSVESTM 
FMPVRDVIIL DASLKDSVGV INEGRGNSVG YIYTAATNAT ANYATLKNYM PIEIGSGAEA 
MTALGVRVAG TVENYADIIN NSSPYTESGV VYGAKGLVSD LNQAVMTNYG NIDMNGKNAT 
AFYNGFLLNS ASDHTVINNE KGIVIYSTAS HRGSSLGYVA GESNVSANKL EVNGSDGVVA 
FSHGGNITLS PLTAGGTLEL TANGENTYAF YHQKGGGNIA GKIKINGTIN ANVKNGGIGL 
HYTGTGVTAA PVNLGTELAT IIDSSGGTLN IITDSDSYNL TLKNTTVNLS NLSNLNFDNV 
TFTPDAKTKM YDGGLFVDID SNIDKNNNTG SKAYRNTGMS ASNVTVNSGI TITGTENSLT 
AVGQDFSDIV RWGELANKGT ISLSGDESTG IYGKKSTIEN TGSINLSGKD TTTIYSIDSS 
VKNTGEIKTG DKGVGIYSEI DPYSFAILTV ENDGKIEAGT GTGAVGIYSV LKNTNIPYYN 
HETILNTNSD IDMRKSQNSV GIYSIDRNVS GTDSGKISIG KDSYGVYVNN GDVSLNNLTL 
NISGDNSVGI YTNGTGSFSG NGTVNVDGKG IVILNIESTG TYNQNFVVNS TAGSSYIFQN 
LKNRTLVSNN TVNLGEGGTY INAVDSNVTL DINSDLNSFN TATGNYDSRM IGAVSSGGTG 
SITNKGIISF GDESAGLYAR DGGQIINEGS ISLGANSVGL YGEGTGANIT NDILAEINVR 
DNSVGIVSNN GDSITSSGKI NGTGERLTGI YSDSINNTVI QVNGDITLTG NKSVGAYLAG 
TGLQTFTNNA VITSGSSNSD LDPAIGIYNN GSGNKIINNN TIKTGDNSVS IYNNSGEIIQ 
NSGNITTGQN SVGIYTNSGK VSLLAGSMNI NGADSVGIYA SENAEIENNL SMTFTDSSYG 
IVANSGSKLI NNSGAVIMGE SSVFIYSKGG NEVLNKAGSD ITLTGSNSSG IYTTDGTDIE 
NHGHITADTG LGNIGISNKG GSVLNTGNIK TGDSIIIDEE NTFLNTYSVG VYGENTKGFK 
NTGNIEAGYR GIGLYIKDNT GEALNSGDIK SDKEGVMGIY AENSTVKNTG NITLSGDESI 
GIAAAKKVTA VNSGVITMNG NNSIGIYANI SSKIINEKTG VININGNNST GIQLSLGSTL 
ENYGQINMAS GIYGSKDIAI GDQGYTPPSI VNAGVIMVDE KFEIDGINLT IKVDPDSLRL 
PTLEEITLGG YSPEDLNAGF LISNSTSIKA PSFDLGGNTT KIDPNFTQGT NMRVYKFVNV 
FDPSTPEGGP NTGEVAVESG SLTFDAIPVV NKDSGGIDIW MEKINYNKFT QGTWYNEFSE 
NIESGYLNAA GDSLKLYDRL DLISTQSALN NDFEQLAGNV YSNIMQREQN IGSMFNNTLD 
ILQNSENNTK ENVKIGVVAG YGSREEKTSG VPDYDYKTYG VLGLREVERT YKHKFGYSLG 
YTQTNFEFDD SDSKDRADTF QIGVHNKYST NGWNFKNDLL GRMSIHNVDR NIKWSDGNKS 
ELSSDYNVYG VSSLNSAGRE IDLGNNFTLE PYAGLELGYA VHSDFEEKDG IEKLKVREND 
AYSVKPSAGI RFGVKKDIKD SGWMVKGNLG AAYEYELGDM NRQEEASVIN IENGYHKLAK 
VSEDKGMLKV NASGGVEFKE RYGIYVTGEY AAGNDDREDY KIGVTLKASF