Gene Sterm_0488 details

Gene Information

• Locus tag: Sterm_0488
• ID: 8595974
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 540766
• End bp: 541527
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 37%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003307294
• Protein GI: 269119117

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.192995
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATAA AAGAAAAAAC TGCTATAATA ACAGGCGGAA GTCGCGGTCT TGGCCGGAAT 
ACAGCCCTTA ATCTTGCAAG TCGGGGAGTA AATATTATTT TTACTTATAA CTCTAATAAA 
TTTGAAGCAG AAAAGACTCT CCAACTTATT CAAGAGTATG GAGTAAATGG AGCTATGTTA 
AATCTTGATA CAGCTAATAC TAAATTATTT GATGCTTTTG TACAAAATGT TGAGAAAATT 
TTACAGGAAT GGAAGTGTAA AACATTTAAT TACCTGATTA ACAACGCTGG AACATCACAT 
CACAATTCAA TTGAAAATAC TACAGAAGAA GAATTAGACA CTCTTTATAA TGTCCATTTT 
AAGGGAGTGT TCTTTCTTAC GCAAAAACTC CTTATGCTTC TTAATGACGG AGGGAGTATA 
ATTAATATTT CCACAGGTCT AACACGATTT ACTTCACCTG GAAGCGCAGC TTATGCGTCT 
ATAAAAGGTG CCGTTGAAGT GATGACACGT TATTTGGCAA TGGAATTAGG ACCACGTAAA 
ATCACCGTAA ATACTATTGC TCCCGGAGCC ATTCAAACAG ATTTCAGTGG GGGTGTAGTC 
CGTGATAATC CTGAAGTAAA TAAAATGATA GCTGAGCATA CAGCACTGGG TCGTGCTGGT 
GTTCCGGATG ATATCGGACC TATGATTGCT TCACTATTAT CAGATAGTAA TAGATGGGTA 
ACCGGTCAGC GTATTGAAGT TTCCGGAGGA ATGTTTCTTT AA 

 

Protein sequence

MDIKEKTAII TGGSRGLGRN TALNLASRGV NIIFTYNSNK FEAEKTLQLI QEYGVNGAML 
NLDTANTKLF DAFVQNVEKI LQEWKCKTFN YLINNAGTSH HNSIENTTEE ELDTLYNVHF 
KGVFFLTQKL LMLLNDGGSI INISTGLTRF TSPGSAAYAS IKGAVEVMTR YLAMELGPRK 
ITVNTIAPGA IQTDFSGGVV RDNPEVNKMI AEHTALGRAG VPDDIGPMIA SLLSDSNRWV 
TGQRIEVSGG MFL