Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0478 |
Symbol | |
ID | 8599603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 523086 |
End bp | 529715 |
Gene Length | 6630 bp |
Protein Length | 2209 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003307284 |
Protein GI | 269119107 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA AGAAATTGTT ATTTGCTTTG GCATTAAATG CTTTTTCAAC ATCGATTGTA AATGCAAATG ATCAGGCAGT AAAGAAATAT AATATATTGT ATAATAACAT GGTAAAAAAT ATAGATTTAG AAAAAACAAA TGAAAGTAAC TATGGCTTAA TTGAAAAAGT TTTAAACCAA AGAAATAAAG AACTGAAAGA TTTATATCTA CAAAATGACT ATATTGTAAA ACCTGAATAT CTGGAATGGC AGATTTTCTT TACTGGTTTC TATAATTATG CCGATAGAGG CGGAAATCAA AAAAATATTT TTAATAAAAC AGCAGCTGAC GCTAAAACGG TAGATTTAGG AATGGTAATT CCTATAAAAG GAATTAAAAG AAATGATCTG ATTTTAAATA TAACCTCTGT GAATGAACCT ATAGTGAATG TAAACTTAAA TCCGATAAAA GCACCGGAAA TGACAGCACC TGAAGTTGTA TATACAGAAA TCGATTTTCC AAATATTCCT ATTATTGGAT CTATACCCTT AAATCAACAA AATTCACTTA ATGCCATAAA ATTTGGAGAA CGTAAAAGTG AAGTAAAATA TAATGTTTTG GGGAGCAGTA TTTTTAATAA TCTAAATGTT GATTCTACTA ATGGAACATC ATTATTACTT GATGAGAATA CCCGTGATAT TTTAATAACC GGAGAAATGT TATATTCAAA CGGAACTGTT GCAGGTACAA GTGCTTATAC ATATAATCAT ACAGGATATC CAGATGGATT TTCAGTGAAT AATATAGGAA ATGGCGGGAA TTTTGAAATA AAAGGAAACT GGGATATGTC GGTAGTTGAT GGTATGGTTT ATCAGTTTGG AGTAGGATTC CTGTCTTATA TGCCATATTT TTCAAATGTA GACAGTAAAG TCTTATTTTC TGGTAATTTG GAATTAACAG CAAAATCTAC GAGTCCAAGT TATTTTTCAC GATCTATAGT GGGATTAAGT CTTGATCTGT CAAATCAAAA CCTAGATCCT TCAACAAAAG CAGTTTTAGA AAATAGCGGG AAAATAATTT TGAGAAGTGG AAATTCAGTA ACTAAAAATA TTATTGCAAT GCAGCTTATA GGAGGTTCAA GTACATCTAC ACAGGCTGGA GAATTAATTA ACTCAGGAAA TATTATAATA GAGACTAGAA CAGATCTAAT TGGAGATGCT GGAGGAGTGG GAATCCTTGT ATCTGTGGAA CCAGTAACAA AACCTGTATT GGTAAAATCA GGTAATATAT TGGTAAATGG GAAGGGTAAT ACCGGAGTTT TATTAGGGCA GGAAAATTTT CAAACTGATT ATGTTAATTC AAATATAACA ATAGATGGTT CAAATGGAAA GATAATTTTG GAAGGTGAGA GAAATTCAGG ATTAAATGCA AAGAGAGCTG TAACTTCAAC AGGGAACTCT TTATTAGATA ATGTAAAAAA TATGAATATA CTTATAAACG GCTTAAACAC TCCTGCTATA GTAAGACATA CAGAGAATCC AATTGAGATG ACAATGGATA TGAAATTAAA TGATTCAATT ATACAGTCTG TGGAATTTGG AGAAAATTCA GTCAAAAGTT CCTTAGTACA AGTTGGTTCT AACAGCAGTT ACAGTTTTGG TAACGTTATA CTGGAAAGCA GCCTTGCTAA TTCTATAATT CCTATTAATG CAGGCAGACA GAATATAATA GCAGCAGGAT CAAGCAGTTC TATAATAATT AATTATATGC CCATAACCAT AAATTCAGGT GCAAAGGCTA TGATAGGAAT AGCCAGCGAG GGAACTATTG AAAATTATGC AGATATAGTC AATAATTCAT CAGTGTATGA AGAAAATAAC TATAAATATG GGTCAGTGGG GCTCGCTTTA ACCAAATATT ACAGCGGATC ATCAGCTTTA AATAAGGGAA ATATAGATAT GAACGGAGAT TATGCTACAG GTATATATAA TCTTGGAAAG ATGTTTTCTT CAGATAGCGA TCATATAGTT ATAAACGGGA AAAATAGTAC AGCAGTATAT GCAGGAACTT CGCATCCTAA TTATTATTCT CAAACAGTTA TAAATGCTGA TAAAATAGTA GTTAATGGAG ATAAAAGTAC TCTGTTTTTT TCAAACGGAG GAAATATTGA GATAGGAACT CATACTTTGG GACAGGCAAT GGAATTAACA GCAGCAGGAA AAGATACATT TGCTTTTTTT ATTAATAAGT ATTACAACCT ATTTGGGAAA TTTAGTTTGA ACAGTGATGT AAACTTAAGC TTGAAAGATG GGGCAATAGG ATTTTATTAT AAAGGAGCAG GTGCATCAAA TATAGTTGAT ATACCTTTAT ATTTAAGTAC CATAGTAGAT ACTGCAAATG GTAAATTATC TATAAATTCA GATGACAAAA GTTATAATAT TGCTATAGAA AATTCCGGAA TTAAATTAAG TGATCTTGCA AATATATCAG GATCTGGAAT AGAATTTAAC GGTTCAAAAA AAGCTAAACT GCTTAAGTCA AAATTAGTTT TGGATATAGA TTCAAATATA GATAAAAACA ATACAACAGG GGATAAAACA TACAGAGATT TAGAAATAGG AAAATCAGGA GTGAGTATTC TTGAAGGAAT TACACTTAGC GGAACAGAGA ATGATTTGAT AGGAATAGGA CAGAGTTATA ATTACAATGA TCCTGTTAAT AGTTATATCA GCAGTGAAAA TGCCGGGATA ATAGACTTAT CAGGAAATAA CTCTATAGGA ATGTACAGTA AACGTTCACA GCTCACAAAT GCAGGAAAAA TAAGTGCAAT CGGGGATAAG AGTACAGGAA TGTATATTAA ATCAGGAACT GTAACAAATG ATGGTGAAAT AATTATAGGA GATAGTGGTG TAGGTATATA TGGGGAAACT TATCTGGAGC CAAGTGATAA TCCGTCTAAT AGTAGTTCAT CAATAAATAT AAATAATACA GGAAAAATAA CAGCAACTGC CGGTAACAAG GCAATAGGAA TATATGGTAA TCAAAATGCA GTGGCAGGTA CAAATTCATC CGGGAATATT TCTTTATTCA CAGGGACTGA AATAGATATG AGTTCTTCAA AAGGAGGAGT AGGGATATAC TCCAACGGTA TATCAATATC AGGTTTAGGT AATACTAAAA TAACAGTTGG CGAAAATGGA ACAGGTCTTT ATATAAAAGA TTCAAACGCA AATTTTGTTG ATCTGGATTT AAATTTAACG GGAGACAATT CAGTTGGTGT GTATACTGAC GGAAGTGCTT CTTTCGGAGG AACAGGTAAT ATAAATATAG ATGGTAAAGG GATAGTAGTA TTTAATGTAG CAGGGAGCGG GACTTTTAAT GAGAACTTTA CTGTAAATTC TACAGAAGAA TCGCAGTATA TACTACAAAA TATAAAAGAT AAAATTTTAT ATTATAATTC TACTGCTAAT CTTGGAGGAG GAGGAACATT TGTATCAGGA GTTAACTCAG CAGTATTATT GGGAGAAGAT TCAATTTTGA ACTCAGAAAA CTCTAATCTA GTGGGTATAG CTTTAACAGG AGGTTATGTA AATGGTCTCC CTGTAAATAT AAACGGAGAA ATTTTGGAAC ATGAAGCTAC AAATAAAGGT AAGATAAACT TTGGAGATAA TTCAGTAGGA ATATATGTTA TAAATGGAGC AAGCGGTAAA AATACCGGTG AAATATCTTT AGGGAAAAGC TCTGTGGGCT TATATGGCAG CGGCAATGGA ACAAATATTG ATAATGCTGG AAAAATATAT ATAGGTGAAA ATTCAGTTGG TTTATATAAT AAAGATGGAA ACAGTATTTC AAATTCCGGA AGTATTGAAA GTATAGATTT AAGAGTAATA GGCTTATATT TAGATGGAAA CAGCAATTCT ATAGGTGTAA ATACAGGGGA AATAAAATTA CTGGGAGATA AATCAATTGG TATATACATC TCTGAAAATG GTACTAAAAC GATTAACAAT ACAAACCGTA TTGAAATAGG AAGTTCAAAT TTAGCAGAAG ATCCAAGCAT AGGGATATTT AATAATAATA TTAATGGAAC TGTAAATAAT TCATCAGATA TAATATCAGG TAAAAATTCT ATAAATATCT ATAATAAAGG TGGTCAGATA AACCATCTCT TAGGAAATAT AGAGGTTGGA GAAAAAGGAA CAGGGATTTA TACAAGCTCC GGCAGTGTGA AATTAACAAG CGGGACTTTG AATCTAAATG GCATAGCAGC TGTAGGGGTT TATGGAACTA ATAATGCAAT CATAGATATT AACGCAAAGA TAAATGTAAG TCAAGAAAGT TATGGAATGG TCTTAATTGG AGAATCAGAT CTTACAAATA GAGATGTTTC AACACTTGCA GACAAGGGAG TTTTATTATA TTCAGACGGT AATGTAAATG TTAAAAATGA ATATGGTGCA AATATTAATG TGGCAGGTTC GAACTCTATA GGATTCTATA TGAAAAATGG CGGAACTCTT GTAAATAAAG CAGAAATTAT TGGAAATTCA GGGATAGGAA ATATAGGAAT ATATAATAAG TCAGGGAATA TAGATAATAG TGGTAACATA AAAATAGGGA ATTCCCTTAT AATTGATCCC CAAAATCCAT TTGTCAATGA ATATGCAGTA GGTATTTATG GTGATGGTGT AAAGAATATA AAGAATACAG GTAATATAGA GGTTGGAGCT AATGCAGTAG GGTTTTATAT CACAGGAAAT TTAAATGAAG CATTGAATAC AGGGAATATA AGTTCAGACT CAGAAAAAGC CATTGGAATT TATTCTGAAC AAGGAGCAGT AAGAAATACA GGTAATATAA CATTATCAGG AGATGGAAGT ATAGGAATTG CAGCAGCAAG AAATAGTAAA ATTTCAAATT CAGGGACAAT AACTATGAAT GGTAATGAAA ATATAGGGAT TTATGCACAT TCAAACTCAC AAATAATAAA TGAAAGTACG GGAAAAATTT ATATAAATGG TAATGACAGT ATTGGAGTTC AGTTATCAGG CGGATCAGTA CTGGAAAATT ATGGATTAAT AGAAGTTACT GCCGGGACAA TTGGTTCAAT GCAAATAGTA ACCGGAGATC CAGCATATAC TCCGCCTAGT ATAATAAATG CGGGAGTTAT AAAAGTAGAT GAGAAATTTG AGTTGGATGG CTTGAATTTA ATAATAAAAC CTGATCCAGA AAGTTTTAGA GCACCTACAA TGGAAGAATT AATAAAAAAT GAATATGCAT TAGAAGATAT AAATGCTGGT TTTCTATTAA GCAATAAAGT AAACATAGCA GCCCCAAGTT TTGATTTTGG TAATAATACC GTAGGAATTG ATCCTTTATT TACTCAGGGA ACTAATGCAA GAGTGTATAA ATTTGAAAAT GTATTTGATC CTACCACTCC TGAAGGCGGA CCAAATACAG GTAAAGTAGC TGTCAAAAGC GGTTCTTTAA CATTTGATGC AATACCTGTA ACGAATGATA AAGGAAAAAT AGATATTTGG ATGGAGAAAA TAAACTATAA TGAGTTTACT CAAGGGTCTT GGCAAAATGA GTTTGCAGGA AATATAGAAG GAAATTATTT GAATGCAACA GGTGATGCAC TAAAATTGTA TGACAGGCTA GATTTAATAA CTGAAAAAAA TGAATTATAT AAGAGATTCG ATCAGCTGGC AGGAAGTGTT TATGCAAATA TAAATCAAAG AGAAAGCGAT ATAGCAGGAG TATTTGAAAA TTCACTGTAT TTATTACAAG ATTCAAAGAA TAACACAAAA GAGAATGTCA AGATAAATGT AATAACAGGT CAGGGAAAAA TGAAAGACGA TACAGCAGGA GTGACAGGTT ATGATTTTGG TACAGTTGGA GTATTAGCTT TAAGAGAAGT CGAAAGAACG TACAAACATA CATTTGGATA TTCATTAGGA TATCTGCACA CAAGTTTTGA AATGGATGAT AATAACAACA GTGAGGAATG GGTAGATACG ATTCAGTTAG GAGTACATAA TAAGTATACA GTAAGTGGCT GGATACTGAG AAATGACTTA ACAGGAAGGG CAAGTATCCA TAATATAGAT AGAAATATAG ACTGGGCAGA TGGCAGATCA GAAATGAATG GATTTTATGA GACATATAGC ATAACAAGTG ATAATAAGCT GGGTAAGGAA GTATTGGGTG GAAAGAACGT AAGTATAACA CCTTATGCAG GACTAAAAGC AATGTATGTA ACAAGACCTT CATTTGAAGA AAAAGGATTA GAAAAATTAC AAGTAGAAGG AAATGATGCC TGGAGTGTAA AACCAAAAGT AGGATTTGAA TTTAAGGCAT CAACAAATGA AAGTAAAAAT GGCTGGAAAT TAAAAGGAGC TTTAGATATA ACCTATGAAT ATGAATTAGC TAATTTAAAT ACTCAAGAGA AAGCAAGATT GGTATCACTA GAAGATGGAT ATCACAACTT AGCGAAGCCA GAAGAAGAAA ATGGAAGATT AAGAACAAAA GTAGTAATAG GAACAGAAAT AGAGGACAGA TATGGAATAT TCTTAACAGG AGAATATTCT ATAGGAGAAC ATAGCCAAGA TGATTATAGA GCAGGAGTTA CTCTAAAAGC TGTGTTTTAA
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Protein sequence | MKNKKLLFAL ALNAFSTSIV NANDQAVKKY NILYNNMVKN IDLEKTNESN YGLIEKVLNQ RNKELKDLYL QNDYIVKPEY LEWQIFFTGF YNYADRGGNQ KNIFNKTAAD AKTVDLGMVI PIKGIKRNDL ILNITSVNEP IVNVNLNPIK APEMTAPEVV YTEIDFPNIP IIGSIPLNQQ NSLNAIKFGE RKSEVKYNVL GSSIFNNLNV DSTNGTSLLL DENTRDILIT GEMLYSNGTV AGTSAYTYNH TGYPDGFSVN NIGNGGNFEI KGNWDMSVVD GMVYQFGVGF LSYMPYFSNV DSKVLFSGNL ELTAKSTSPS YFSRSIVGLS LDLSNQNLDP STKAVLENSG KIILRSGNSV TKNIIAMQLI GGSSTSTQAG ELINSGNIII ETRTDLIGDA GGVGILVSVE PVTKPVLVKS GNILVNGKGN TGVLLGQENF QTDYVNSNIT IDGSNGKIIL EGERNSGLNA KRAVTSTGNS LLDNVKNMNI LINGLNTPAI VRHTENPIEM TMDMKLNDSI IQSVEFGENS VKSSLVQVGS NSSYSFGNVI LESSLANSII PINAGRQNII AAGSSSSIII NYMPITINSG AKAMIGIASE GTIENYADIV NNSSVYEENN YKYGSVGLAL TKYYSGSSAL NKGNIDMNGD YATGIYNLGK MFSSDSDHIV INGKNSTAVY AGTSHPNYYS QTVINADKIV VNGDKSTLFF SNGGNIEIGT HTLGQAMELT AAGKDTFAFF INKYYNLFGK FSLNSDVNLS LKDGAIGFYY KGAGASNIVD IPLYLSTIVD TANGKLSINS DDKSYNIAIE NSGIKLSDLA NISGSGIEFN GSKKAKLLKS KLVLDIDSNI DKNNTTGDKT YRDLEIGKSG VSILEGITLS GTENDLIGIG QSYNYNDPVN SYISSENAGI IDLSGNNSIG MYSKRSQLTN AGKISAIGDK STGMYIKSGT VTNDGEIIIG DSGVGIYGET YLEPSDNPSN SSSSININNT GKITATAGNK AIGIYGNQNA VAGTNSSGNI SLFTGTEIDM SSSKGGVGIY SNGISISGLG NTKITVGENG TGLYIKDSNA NFVDLDLNLT GDNSVGVYTD GSASFGGTGN INIDGKGIVV FNVAGSGTFN ENFTVNSTEE SQYILQNIKD KILYYNSTAN LGGGGTFVSG VNSAVLLGED SILNSENSNL VGIALTGGYV NGLPVNINGE ILEHEATNKG KINFGDNSVG IYVINGASGK NTGEISLGKS SVGLYGSGNG TNIDNAGKIY IGENSVGLYN KDGNSISNSG SIESIDLRVI GLYLDGNSNS IGVNTGEIKL LGDKSIGIYI SENGTKTINN TNRIEIGSSN LAEDPSIGIF NNNINGTVNN SSDIISGKNS INIYNKGGQI NHLLGNIEVG EKGTGIYTSS GSVKLTSGTL NLNGIAAVGV YGTNNAIIDI NAKINVSQES YGMVLIGESD LTNRDVSTLA DKGVLLYSDG NVNVKNEYGA NINVAGSNSI GFYMKNGGTL VNKAEIIGNS GIGNIGIYNK SGNIDNSGNI KIGNSLIIDP QNPFVNEYAV GIYGDGVKNI KNTGNIEVGA NAVGFYITGN LNEALNTGNI SSDSEKAIGI YSEQGAVRNT GNITLSGDGS IGIAAARNSK ISNSGTITMN GNENIGIYAH SNSQIINEST GKIYINGNDS IGVQLSGGSV LENYGLIEVT AGTIGSMQIV TGDPAYTPPS IINAGVIKVD EKFELDGLNL IIKPDPESFR APTMEELIKN EYALEDINAG FLLSNKVNIA APSFDFGNNT VGIDPLFTQG TNARVYKFEN VFDPTTPEGG PNTGKVAVKS GSLTFDAIPV TNDKGKIDIW MEKINYNEFT QGSWQNEFAG NIEGNYLNAT GDALKLYDRL DLITEKNELY KRFDQLAGSV YANINQRESD IAGVFENSLY LLQDSKNNTK ENVKINVITG QGKMKDDTAG VTGYDFGTVG VLALREVERT YKHTFGYSLG YLHTSFEMDD NNNSEEWVDT IQLGVHNKYT VSGWILRNDL TGRASIHNID RNIDWADGRS EMNGFYETYS ITSDNKLGKE VLGGKNVSIT PYAGLKAMYV TRPSFEEKGL EKLQVEGNDA WSVKPKVGFE FKASTNESKN GWKLKGALDI TYEYELANLN TQEKARLVSL EDGYHNLAKP EEENGRLRTK VVIGTEIEDR YGIFLTGEYS IGEHSQDDYR AGVTLKAVF
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