Gene Sterm_0478 details

Gene Information

• Locus tag: Sterm_0478
• ID: 8599603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 523086
• End bp: 529715
• Gene Length: 6630 bp
• Protein Length: 2209 aa
• Translation table: 11
• GC content: 32%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003307284
• Protein GI: 269119107

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACA AGAAATTGTT ATTTGCTTTG GCATTAAATG CTTTTTCAAC ATCGATTGTA 
AATGCAAATG ATCAGGCAGT AAAGAAATAT AATATATTGT ATAATAACAT GGTAAAAAAT 
ATAGATTTAG AAAAAACAAA TGAAAGTAAC TATGGCTTAA TTGAAAAAGT TTTAAACCAA 
AGAAATAAAG AACTGAAAGA TTTATATCTA CAAAATGACT ATATTGTAAA ACCTGAATAT 
CTGGAATGGC AGATTTTCTT TACTGGTTTC TATAATTATG CCGATAGAGG CGGAAATCAA 
AAAAATATTT TTAATAAAAC AGCAGCTGAC GCTAAAACGG TAGATTTAGG AATGGTAATT 
CCTATAAAAG GAATTAAAAG AAATGATCTG ATTTTAAATA TAACCTCTGT GAATGAACCT 
ATAGTGAATG TAAACTTAAA TCCGATAAAA GCACCGGAAA TGACAGCACC TGAAGTTGTA 
TATACAGAAA TCGATTTTCC AAATATTCCT ATTATTGGAT CTATACCCTT AAATCAACAA 
AATTCACTTA ATGCCATAAA ATTTGGAGAA CGTAAAAGTG AAGTAAAATA TAATGTTTTG 
GGGAGCAGTA TTTTTAATAA TCTAAATGTT GATTCTACTA ATGGAACATC ATTATTACTT 
GATGAGAATA CCCGTGATAT TTTAATAACC GGAGAAATGT TATATTCAAA CGGAACTGTT 
GCAGGTACAA GTGCTTATAC ATATAATCAT ACAGGATATC CAGATGGATT TTCAGTGAAT 
AATATAGGAA ATGGCGGGAA TTTTGAAATA AAAGGAAACT GGGATATGTC GGTAGTTGAT 
GGTATGGTTT ATCAGTTTGG AGTAGGATTC CTGTCTTATA TGCCATATTT TTCAAATGTA 
GACAGTAAAG TCTTATTTTC TGGTAATTTG GAATTAACAG CAAAATCTAC GAGTCCAAGT 
TATTTTTCAC GATCTATAGT GGGATTAAGT CTTGATCTGT CAAATCAAAA CCTAGATCCT 
TCAACAAAAG CAGTTTTAGA AAATAGCGGG AAAATAATTT TGAGAAGTGG AAATTCAGTA 
ACTAAAAATA TTATTGCAAT GCAGCTTATA GGAGGTTCAA GTACATCTAC ACAGGCTGGA 
GAATTAATTA ACTCAGGAAA TATTATAATA GAGACTAGAA CAGATCTAAT TGGAGATGCT 
GGAGGAGTGG GAATCCTTGT ATCTGTGGAA CCAGTAACAA AACCTGTATT GGTAAAATCA 
GGTAATATAT TGGTAAATGG GAAGGGTAAT ACCGGAGTTT TATTAGGGCA GGAAAATTTT 
CAAACTGATT ATGTTAATTC AAATATAACA ATAGATGGTT CAAATGGAAA GATAATTTTG 
GAAGGTGAGA GAAATTCAGG ATTAAATGCA AAGAGAGCTG TAACTTCAAC AGGGAACTCT 
TTATTAGATA ATGTAAAAAA TATGAATATA CTTATAAACG GCTTAAACAC TCCTGCTATA 
GTAAGACATA CAGAGAATCC AATTGAGATG ACAATGGATA TGAAATTAAA TGATTCAATT 
ATACAGTCTG TGGAATTTGG AGAAAATTCA GTCAAAAGTT CCTTAGTACA AGTTGGTTCT 
AACAGCAGTT ACAGTTTTGG TAACGTTATA CTGGAAAGCA GCCTTGCTAA TTCTATAATT 
CCTATTAATG CAGGCAGACA GAATATAATA GCAGCAGGAT CAAGCAGTTC TATAATAATT 
AATTATATGC CCATAACCAT AAATTCAGGT GCAAAGGCTA TGATAGGAAT AGCCAGCGAG 
GGAACTATTG AAAATTATGC AGATATAGTC AATAATTCAT CAGTGTATGA AGAAAATAAC 
TATAAATATG GGTCAGTGGG GCTCGCTTTA ACCAAATATT ACAGCGGATC ATCAGCTTTA 
AATAAGGGAA ATATAGATAT GAACGGAGAT TATGCTACAG GTATATATAA TCTTGGAAAG 
ATGTTTTCTT CAGATAGCGA TCATATAGTT ATAAACGGGA AAAATAGTAC AGCAGTATAT 
GCAGGAACTT CGCATCCTAA TTATTATTCT CAAACAGTTA TAAATGCTGA TAAAATAGTA 
GTTAATGGAG ATAAAAGTAC TCTGTTTTTT TCAAACGGAG GAAATATTGA GATAGGAACT 
CATACTTTGG GACAGGCAAT GGAATTAACA GCAGCAGGAA AAGATACATT TGCTTTTTTT 
ATTAATAAGT ATTACAACCT ATTTGGGAAA TTTAGTTTGA ACAGTGATGT AAACTTAAGC 
TTGAAAGATG GGGCAATAGG ATTTTATTAT AAAGGAGCAG GTGCATCAAA TATAGTTGAT 
ATACCTTTAT ATTTAAGTAC CATAGTAGAT ACTGCAAATG GTAAATTATC TATAAATTCA 
GATGACAAAA GTTATAATAT TGCTATAGAA AATTCCGGAA TTAAATTAAG TGATCTTGCA 
AATATATCAG GATCTGGAAT AGAATTTAAC GGTTCAAAAA AAGCTAAACT GCTTAAGTCA 
AAATTAGTTT TGGATATAGA TTCAAATATA GATAAAAACA ATACAACAGG GGATAAAACA 
TACAGAGATT TAGAAATAGG AAAATCAGGA GTGAGTATTC TTGAAGGAAT TACACTTAGC 
GGAACAGAGA ATGATTTGAT AGGAATAGGA CAGAGTTATA ATTACAATGA TCCTGTTAAT 
AGTTATATCA GCAGTGAAAA TGCCGGGATA ATAGACTTAT CAGGAAATAA CTCTATAGGA 
ATGTACAGTA AACGTTCACA GCTCACAAAT GCAGGAAAAA TAAGTGCAAT CGGGGATAAG 
AGTACAGGAA TGTATATTAA ATCAGGAACT GTAACAAATG ATGGTGAAAT AATTATAGGA 
GATAGTGGTG TAGGTATATA TGGGGAAACT TATCTGGAGC CAAGTGATAA TCCGTCTAAT 
AGTAGTTCAT CAATAAATAT AAATAATACA GGAAAAATAA CAGCAACTGC CGGTAACAAG 
GCAATAGGAA TATATGGTAA TCAAAATGCA GTGGCAGGTA CAAATTCATC CGGGAATATT 
TCTTTATTCA CAGGGACTGA AATAGATATG AGTTCTTCAA AAGGAGGAGT AGGGATATAC 
TCCAACGGTA TATCAATATC AGGTTTAGGT AATACTAAAA TAACAGTTGG CGAAAATGGA 
ACAGGTCTTT ATATAAAAGA TTCAAACGCA AATTTTGTTG ATCTGGATTT AAATTTAACG 
GGAGACAATT CAGTTGGTGT GTATACTGAC GGAAGTGCTT CTTTCGGAGG AACAGGTAAT 
ATAAATATAG ATGGTAAAGG GATAGTAGTA TTTAATGTAG CAGGGAGCGG GACTTTTAAT 
GAGAACTTTA CTGTAAATTC TACAGAAGAA TCGCAGTATA TACTACAAAA TATAAAAGAT 
AAAATTTTAT ATTATAATTC TACTGCTAAT CTTGGAGGAG GAGGAACATT TGTATCAGGA 
GTTAACTCAG CAGTATTATT GGGAGAAGAT TCAATTTTGA ACTCAGAAAA CTCTAATCTA 
GTGGGTATAG CTTTAACAGG AGGTTATGTA AATGGTCTCC CTGTAAATAT AAACGGAGAA 
ATTTTGGAAC ATGAAGCTAC AAATAAAGGT AAGATAAACT TTGGAGATAA TTCAGTAGGA 
ATATATGTTA TAAATGGAGC AAGCGGTAAA AATACCGGTG AAATATCTTT AGGGAAAAGC 
TCTGTGGGCT TATATGGCAG CGGCAATGGA ACAAATATTG ATAATGCTGG AAAAATATAT 
ATAGGTGAAA ATTCAGTTGG TTTATATAAT AAAGATGGAA ACAGTATTTC AAATTCCGGA 
AGTATTGAAA GTATAGATTT AAGAGTAATA GGCTTATATT TAGATGGAAA CAGCAATTCT 
ATAGGTGTAA ATACAGGGGA AATAAAATTA CTGGGAGATA AATCAATTGG TATATACATC 
TCTGAAAATG GTACTAAAAC GATTAACAAT ACAAACCGTA TTGAAATAGG AAGTTCAAAT 
TTAGCAGAAG ATCCAAGCAT AGGGATATTT AATAATAATA TTAATGGAAC TGTAAATAAT 
TCATCAGATA TAATATCAGG TAAAAATTCT ATAAATATCT ATAATAAAGG TGGTCAGATA 
AACCATCTCT TAGGAAATAT AGAGGTTGGA GAAAAAGGAA CAGGGATTTA TACAAGCTCC 
GGCAGTGTGA AATTAACAAG CGGGACTTTG AATCTAAATG GCATAGCAGC TGTAGGGGTT 
TATGGAACTA ATAATGCAAT CATAGATATT AACGCAAAGA TAAATGTAAG TCAAGAAAGT 
TATGGAATGG TCTTAATTGG AGAATCAGAT CTTACAAATA GAGATGTTTC AACACTTGCA 
GACAAGGGAG TTTTATTATA TTCAGACGGT AATGTAAATG TTAAAAATGA ATATGGTGCA 
AATATTAATG TGGCAGGTTC GAACTCTATA GGATTCTATA TGAAAAATGG CGGAACTCTT 
GTAAATAAAG CAGAAATTAT TGGAAATTCA GGGATAGGAA ATATAGGAAT ATATAATAAG 
TCAGGGAATA TAGATAATAG TGGTAACATA AAAATAGGGA ATTCCCTTAT AATTGATCCC 
CAAAATCCAT TTGTCAATGA ATATGCAGTA GGTATTTATG GTGATGGTGT AAAGAATATA 
AAGAATACAG GTAATATAGA GGTTGGAGCT AATGCAGTAG GGTTTTATAT CACAGGAAAT 
TTAAATGAAG CATTGAATAC AGGGAATATA AGTTCAGACT CAGAAAAAGC CATTGGAATT 
TATTCTGAAC AAGGAGCAGT AAGAAATACA GGTAATATAA CATTATCAGG AGATGGAAGT 
ATAGGAATTG CAGCAGCAAG AAATAGTAAA ATTTCAAATT CAGGGACAAT AACTATGAAT 
GGTAATGAAA ATATAGGGAT TTATGCACAT TCAAACTCAC AAATAATAAA TGAAAGTACG 
GGAAAAATTT ATATAAATGG TAATGACAGT ATTGGAGTTC AGTTATCAGG CGGATCAGTA 
CTGGAAAATT ATGGATTAAT AGAAGTTACT GCCGGGACAA TTGGTTCAAT GCAAATAGTA 
ACCGGAGATC CAGCATATAC TCCGCCTAGT ATAATAAATG CGGGAGTTAT AAAAGTAGAT 
GAGAAATTTG AGTTGGATGG CTTGAATTTA ATAATAAAAC CTGATCCAGA AAGTTTTAGA 
GCACCTACAA TGGAAGAATT AATAAAAAAT GAATATGCAT TAGAAGATAT AAATGCTGGT 
TTTCTATTAA GCAATAAAGT AAACATAGCA GCCCCAAGTT TTGATTTTGG TAATAATACC 
GTAGGAATTG ATCCTTTATT TACTCAGGGA ACTAATGCAA GAGTGTATAA ATTTGAAAAT 
GTATTTGATC CTACCACTCC TGAAGGCGGA CCAAATACAG GTAAAGTAGC TGTCAAAAGC 
GGTTCTTTAA CATTTGATGC AATACCTGTA ACGAATGATA AAGGAAAAAT AGATATTTGG 
ATGGAGAAAA TAAACTATAA TGAGTTTACT CAAGGGTCTT GGCAAAATGA GTTTGCAGGA 
AATATAGAAG GAAATTATTT GAATGCAACA GGTGATGCAC TAAAATTGTA TGACAGGCTA 
GATTTAATAA CTGAAAAAAA TGAATTATAT AAGAGATTCG ATCAGCTGGC AGGAAGTGTT 
TATGCAAATA TAAATCAAAG AGAAAGCGAT ATAGCAGGAG TATTTGAAAA TTCACTGTAT 
TTATTACAAG ATTCAAAGAA TAACACAAAA GAGAATGTCA AGATAAATGT AATAACAGGT 
CAGGGAAAAA TGAAAGACGA TACAGCAGGA GTGACAGGTT ATGATTTTGG TACAGTTGGA 
GTATTAGCTT TAAGAGAAGT CGAAAGAACG TACAAACATA CATTTGGATA TTCATTAGGA 
TATCTGCACA CAAGTTTTGA AATGGATGAT AATAACAACA GTGAGGAATG GGTAGATACG 
ATTCAGTTAG GAGTACATAA TAAGTATACA GTAAGTGGCT GGATACTGAG AAATGACTTA 
ACAGGAAGGG CAAGTATCCA TAATATAGAT AGAAATATAG ACTGGGCAGA TGGCAGATCA 
GAAATGAATG GATTTTATGA GACATATAGC ATAACAAGTG ATAATAAGCT GGGTAAGGAA 
GTATTGGGTG GAAAGAACGT AAGTATAACA CCTTATGCAG GACTAAAAGC AATGTATGTA 
ACAAGACCTT CATTTGAAGA AAAAGGATTA GAAAAATTAC AAGTAGAAGG AAATGATGCC 
TGGAGTGTAA AACCAAAAGT AGGATTTGAA TTTAAGGCAT CAACAAATGA AAGTAAAAAT 
GGCTGGAAAT TAAAAGGAGC TTTAGATATA ACCTATGAAT ATGAATTAGC TAATTTAAAT 
ACTCAAGAGA AAGCAAGATT GGTATCACTA GAAGATGGAT ATCACAACTT AGCGAAGCCA 
GAAGAAGAAA ATGGAAGATT AAGAACAAAA GTAGTAATAG GAACAGAAAT AGAGGACAGA 
TATGGAATAT TCTTAACAGG AGAATATTCT ATAGGAGAAC ATAGCCAAGA TGATTATAGA 
GCAGGAGTTA CTCTAAAAGC TGTGTTTTAA 

 

Protein sequence

MKNKKLLFAL ALNAFSTSIV NANDQAVKKY NILYNNMVKN IDLEKTNESN YGLIEKVLNQ 
RNKELKDLYL QNDYIVKPEY LEWQIFFTGF YNYADRGGNQ KNIFNKTAAD AKTVDLGMVI 
PIKGIKRNDL ILNITSVNEP IVNVNLNPIK APEMTAPEVV YTEIDFPNIP IIGSIPLNQQ 
NSLNAIKFGE RKSEVKYNVL GSSIFNNLNV DSTNGTSLLL DENTRDILIT GEMLYSNGTV 
AGTSAYTYNH TGYPDGFSVN NIGNGGNFEI KGNWDMSVVD GMVYQFGVGF LSYMPYFSNV 
DSKVLFSGNL ELTAKSTSPS YFSRSIVGLS LDLSNQNLDP STKAVLENSG KIILRSGNSV 
TKNIIAMQLI GGSSTSTQAG ELINSGNIII ETRTDLIGDA GGVGILVSVE PVTKPVLVKS 
GNILVNGKGN TGVLLGQENF QTDYVNSNIT IDGSNGKIIL EGERNSGLNA KRAVTSTGNS 
LLDNVKNMNI LINGLNTPAI VRHTENPIEM TMDMKLNDSI IQSVEFGENS VKSSLVQVGS 
NSSYSFGNVI LESSLANSII PINAGRQNII AAGSSSSIII NYMPITINSG AKAMIGIASE 
GTIENYADIV NNSSVYEENN YKYGSVGLAL TKYYSGSSAL NKGNIDMNGD YATGIYNLGK 
MFSSDSDHIV INGKNSTAVY AGTSHPNYYS QTVINADKIV VNGDKSTLFF SNGGNIEIGT 
HTLGQAMELT AAGKDTFAFF INKYYNLFGK FSLNSDVNLS LKDGAIGFYY KGAGASNIVD 
IPLYLSTIVD TANGKLSINS DDKSYNIAIE NSGIKLSDLA NISGSGIEFN GSKKAKLLKS 
KLVLDIDSNI DKNNTTGDKT YRDLEIGKSG VSILEGITLS GTENDLIGIG QSYNYNDPVN 
SYISSENAGI IDLSGNNSIG MYSKRSQLTN AGKISAIGDK STGMYIKSGT VTNDGEIIIG 
DSGVGIYGET YLEPSDNPSN SSSSININNT GKITATAGNK AIGIYGNQNA VAGTNSSGNI 
SLFTGTEIDM SSSKGGVGIY SNGISISGLG NTKITVGENG TGLYIKDSNA NFVDLDLNLT 
GDNSVGVYTD GSASFGGTGN INIDGKGIVV FNVAGSGTFN ENFTVNSTEE SQYILQNIKD 
KILYYNSTAN LGGGGTFVSG VNSAVLLGED SILNSENSNL VGIALTGGYV NGLPVNINGE 
ILEHEATNKG KINFGDNSVG IYVINGASGK NTGEISLGKS SVGLYGSGNG TNIDNAGKIY 
IGENSVGLYN KDGNSISNSG SIESIDLRVI GLYLDGNSNS IGVNTGEIKL LGDKSIGIYI 
SENGTKTINN TNRIEIGSSN LAEDPSIGIF NNNINGTVNN SSDIISGKNS INIYNKGGQI 
NHLLGNIEVG EKGTGIYTSS GSVKLTSGTL NLNGIAAVGV YGTNNAIIDI NAKINVSQES 
YGMVLIGESD LTNRDVSTLA DKGVLLYSDG NVNVKNEYGA NINVAGSNSI GFYMKNGGTL 
VNKAEIIGNS GIGNIGIYNK SGNIDNSGNI KIGNSLIIDP QNPFVNEYAV GIYGDGVKNI 
KNTGNIEVGA NAVGFYITGN LNEALNTGNI SSDSEKAIGI YSEQGAVRNT GNITLSGDGS 
IGIAAARNSK ISNSGTITMN GNENIGIYAH SNSQIINEST GKIYINGNDS IGVQLSGGSV 
LENYGLIEVT AGTIGSMQIV TGDPAYTPPS IINAGVIKVD EKFELDGLNL IIKPDPESFR 
APTMEELIKN EYALEDINAG FLLSNKVNIA APSFDFGNNT VGIDPLFTQG TNARVYKFEN 
VFDPTTPEGG PNTGKVAVKS GSLTFDAIPV TNDKGKIDIW MEKINYNEFT QGSWQNEFAG 
NIEGNYLNAT GDALKLYDRL DLITEKNELY KRFDQLAGSV YANINQRESD IAGVFENSLY 
LLQDSKNNTK ENVKINVITG QGKMKDDTAG VTGYDFGTVG VLALREVERT YKHTFGYSLG 
YLHTSFEMDD NNNSEEWVDT IQLGVHNKYT VSGWILRNDL TGRASIHNID RNIDWADGRS 
EMNGFYETYS ITSDNKLGKE VLGGKNVSIT PYAGLKAMYV TRPSFEEKGL EKLQVEGNDA 
WSVKPKVGFE FKASTNESKN GWKLKGALDI TYEYELANLN TQEKARLVSL EDGYHNLAKP 
EEENGRLRTK VVIGTEIEDR YGIFLTGEYS IGEHSQDDYR AGVTLKAVF