Gene Sterm_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0342 
Symbol 
ID8595837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp391966 
End bp392862 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content32% 
IMG OID 
ProductTPR repeat-containing protein 
Protein accessionYP_003307157 
Protein GI269118980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TATTTATACT TGTAATGAGT TTGTTTTTAA TATTAGGGTG TGACAGTGGC 
AACTCATCTG ATAGAGTGGA GGAACACATA AAAAAGAATC TGGGAGACAA CCCCACTAAG
CAGCAAATAG AAGAGCTGTT GATATCAGGA CAGGTAATAT ACGGCTCAAG ACCGGAAGAA
GCTAAGAAAT ATTTTGAAGC AGCAGCTAAA TATGACCCAA GAGGAGCTTA TGCATTAAGT
GATTATTACC TTGAGAAGGA AGATTATGAA AATTTTGAGA AATGGGCGAA ACAAGCAGCG
GAAGGCGGCG ATAAGCGAGC CCAGTTTAAT TTAGGATATT ATTATGATGA GAATAATAGA
CTGGAAGAAG CTAAGAAATG GTATATCAAG GCAGGGGAAC AGGGGAATGT AGGGGCTATG
TTAAACTTAG CATTGTTATA TGAAAATCAA AAAAATGAAA AAGAGGAAGA ATCTTGGTAC
TTGAAGGCAG CGGAGGCTGG AAACGCACAG GCTCAGTATA ATTTAGGGGT AATAAATCGG
AATAAAAAAG AATTAAAAAA ATCAGAAGAA TGGTATTTGA AAGCGGCGAA TCAAAATCAT
CTTTCTGCAT ATAGAGCTTT GGGAAGTTTA TATTCAGAGT TCAAAAAATA TAAAGAATCA
GAAAAATGGT ATTTAAAAGC TTTAGAGAAT GGTGATCAGA CAAAAGAAGT TTATAATAAT
ATAGGTAATT TATACTTTGA AATAGGGGAA TTTAGAAAAA GTTTATATTT TTTTCAAAAA
GCTTTTGAAA AAGATCCTGA TAATAAAATG ATAAATTGTA ATATTCTAAG AGTGAAAGAA
AAATTAGAAG ATAGTGATAA TATTAAAATT TATAAAGAAA AATGTGGAGT AAAATAA
 
Protein sequence
MKKIFILVMS LFLILGCDSG NSSDRVEEHI KKNLGDNPTK QQIEELLISG QVIYGSRPEE 
AKKYFEAAAK YDPRGAYALS DYYLEKEDYE NFEKWAKQAA EGGDKRAQFN LGYYYDENNR
LEEAKKWYIK AGEQGNVGAM LNLALLYENQ KNEKEEESWY LKAAEAGNAQ AQYNLGVINR
NKKELKKSEE WYLKAANQNH LSAYRALGSL YSEFKKYKES EKWYLKALEN GDQTKEVYNN
IGNLYFEIGE FRKSLYFFQK AFEKDPDNKM INCNILRVKE KLEDSDNIKI YKEKCGVK