Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0342 |
Symbol | |
ID | 8595837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 391966 |
End bp | 392862 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | TPR repeat-containing protein |
Protein accession | YP_003307157 |
Protein GI | 269118980 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TATTTATACT TGTAATGAGT TTGTTTTTAA TATTAGGGTG TGACAGTGGC AACTCATCTG ATAGAGTGGA GGAACACATA AAAAAGAATC TGGGAGACAA CCCCACTAAG CAGCAAATAG AAGAGCTGTT GATATCAGGA CAGGTAATAT ACGGCTCAAG ACCGGAAGAA GCTAAGAAAT ATTTTGAAGC AGCAGCTAAA TATGACCCAA GAGGAGCTTA TGCATTAAGT GATTATTACC TTGAGAAGGA AGATTATGAA AATTTTGAGA AATGGGCGAA ACAAGCAGCG GAAGGCGGCG ATAAGCGAGC CCAGTTTAAT TTAGGATATT ATTATGATGA GAATAATAGA CTGGAAGAAG CTAAGAAATG GTATATCAAG GCAGGGGAAC AGGGGAATGT AGGGGCTATG TTAAACTTAG CATTGTTATA TGAAAATCAA AAAAATGAAA AAGAGGAAGA ATCTTGGTAC TTGAAGGCAG CGGAGGCTGG AAACGCACAG GCTCAGTATA ATTTAGGGGT AATAAATCGG AATAAAAAAG AATTAAAAAA ATCAGAAGAA TGGTATTTGA AAGCGGCGAA TCAAAATCAT CTTTCTGCAT ATAGAGCTTT GGGAAGTTTA TATTCAGAGT TCAAAAAATA TAAAGAATCA GAAAAATGGT ATTTAAAAGC TTTAGAGAAT GGTGATCAGA CAAAAGAAGT TTATAATAAT ATAGGTAATT TATACTTTGA AATAGGGGAA TTTAGAAAAA GTTTATATTT TTTTCAAAAA GCTTTTGAAA AAGATCCTGA TAATAAAATG ATAAATTGTA ATATTCTAAG AGTGAAAGAA AAATTAGAAG ATAGTGATAA TATTAAAATT TATAAAGAAA AATGTGGAGT AAAATAA
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Protein sequence | MKKIFILVMS LFLILGCDSG NSSDRVEEHI KKNLGDNPTK QQIEELLISG QVIYGSRPEE AKKYFEAAAK YDPRGAYALS DYYLEKEDYE NFEKWAKQAA EGGDKRAQFN LGYYYDENNR LEEAKKWYIK AGEQGNVGAM LNLALLYENQ KNEKEEESWY LKAAEAGNAQ AQYNLGVINR NKKELKKSEE WYLKAANQNH LSAYRALGSL YSEFKKYKES EKWYLKALEN GDQTKEVYNN IGNLYFEIGE FRKSLYFFQK AFEKDPDNKM INCNILRVKE KLEDSDNIKI YKEKCGVK
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