Gene Sterm_0326 details

Gene Information

• Locus tag: Sterm_0326
• ID: 8595821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 366234
• End bp: 372605
• Gene Length: 6372 bp
• Protein Length: 2123 aa
• Translation table: 11
• GC content: 38%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003307141
• Protein GI: 269118964

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.372271
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTGA ATAAAAAAAT GCTTACGATG CTGGCATTAA ATATTTTAGC GGTAATGCCG 
GCAATAGCCG GTGAAAGTAA AACAGACAGA CTGTACAACA ATATAGTAAA AAATATTCAA 
ACCGGCAAAT CGAATAACAG TAATTATAAA TTAATAGAAA ATATTTTGAA ACAAAAGAAT 
AAAGATCTGA AAGATTTGTA TCTACAGGGG AATTATGTAG AAAAACCCGA GTATCTGGAA 
TGGCAGATAT TTTTTTCAGG TTTTTATGAA GAATATAATA ACGGAAAAGA TAATACCGGA 
GAAAATGCAG AATATAATTC AAAAACGTCA GGATACTATG ATGCGAACGG CAATTATGTT 
CTGACGGAAC ATTCAGTTAA CGGAATACCC GTAAAGCCTT ATGCGGAAGC ACAGGATGGG 
AAATATATTA ATTTAGGAAT CAATATACAG GTAAAAGAAG TTGTTAAAGA TGTTCTGACT 
CTGAATCCGT CTCCTGTCGT ACCGGTAAAT CTGGCTCTCA GTATAGGGAA TGTTTCCGTA 
CCTGTAATAG GAAGCATAGC ACCGGTAAAT GTGCCGCAGT TCAGTATTAC ACAGCCGAAT 
ATTAATATTA CGACTCCGGC AGGAATAAAT ATTGTGATTC CTTCACTTTC CGCATATACA 
AACTGGACAA GCATAACAGG TGCCCAGTGG GCGAATAATA CACAATATGG GAATGTTAAT 
CTGACTTCGC CGAGTTATAA GACCAGTGAT GGAATTAATG CCATAGCACA GTATACAATA 
TCGGGAGATT ATTATGCTGA TTCAGATACA ATAATGTATG TAGATGTATC ACAGACGAGA 
GCAGTGACTG TAGATCTTAC TGAAGATCTC GGAAAACCTT CCAGTAATGT TTATACGACT 
TTTACCAATT ACGGAAAAAT ATATCTGACT GCTTTAAGCA CAGCAGGACT GGAGATTCAG 
AGCGATAACA GAGGAGAGCA CCCTACTCTG AAAAATTCAG GTTTAATAGA AGGACAGAAT 
AAAACTCAGG TTGGGATGAT ATTCACCCCA GAGGGGTCCA CTGATATAAA TGCAACCTAT 
ATAATGGAGA ATACTTCCAG CGGTCAAATA ATAATGGGCG GGAATGATTC ATCCGGAATG 
GCTGTAAATA AAATGGGAGC AAGACCGCTT TTCCTTATTA ATGCACTTAA CACAGGCCTG 
ATAGAAACCA GAGGACTGAA TAACTACGGA ATAGCTTTGG ATTTAAATAA TCTGAATTCA 
GCTTCTAGTA TTCTTAATAA AGGAATAATA AATGTAAAAG GAGACAAATC AGGCGGAATT 
GTACTGAAAG GGTCTATTGG CAATACTGAT GATAATGTAG TAAATAAAGG AAATATAAAT 
GTAACATCAT CAACTTCATT CGGGATTTAT TCAAATGTAA GTGATACAAA ATATGTAAAT 
GAGGGAAATA TAGATCTGAC TTCTGCCGCT AATTCAATCG GCTTAAGAAA TGAAGGCGGA 
TTATTAAAAA ACGGCAGTAA TGGAATAATA AATCTGACAA ACGGAACAAA TAATATAGGA 
CTTTATTCAA CAGACGGAAC GACAGAAAAT AATGGGAAAA TAATAATTTC CAATGGAACA 
GATAATATAG GAATATATGC TAAAGGTTCA GGTACCTCAG TAGTCAACAG CGGAGAAATT 
AATGCAGTTT CTTCAGGAAA GATAAAAGGG ATTGCTGTAA CTGACAATGC TGATATAACA 
AATACTAAAG ATATCAAGCT AAACGGACAG TCGGGATCTG TCGGTATATA TGCATCAAAT 
TACGGGACTT TTACTTCTTC AGGTACGGGA GATGTGGATA TCAAAGTATC AGGTACAGAT 
TCAGTCGGGA TATATTCCGA AAATAACGGG CTTGTTGCTG TAAACGGAAA TATAGAAGCA 
GCAGACAATG CAATAAATTT ATATGCTTCA AACGGAAAAA TTCTTTTGAC AGATGCTGCT 
TTAACCACAA AAGCAAACTC TCTGTTATTT TATATGACAA ATAACGGGAA ATTTTCTTTG 
ACAAATACAC AGGCAGACAT AGAGAACTCC GGAGCAGCCT TTTATTATGA TGCTTCTTCA 
TTAGGGGCCA TAACTTCAGG AATAATGTCC GGATATATTT CAAATATGTT TTTATCCGGT 
TCTAATTCTG TTTTGAATAT GTCTCAGGAT TCCATACTTG TGTCTGTCAA TAATGCAGCT 
GTGAATTTGA GCAATCTGCC GGATTTAAGA ACAACACTTG GCTCTGTGGG AATAAATGTA 
TCGGGAACTG GTTACAAAAG CTATCTGTTA TATAAAAGTA ACCTGACTGT AGATCAAAAT 
GCAAATTTAG ATACTGATAT ACTGGGAACT ATAGGACTTT CAGCAACCGG TGTGGTTAAT 
AACAGTGAGA TAACGGGAAC TCTTGCAGAT AAAAAGGCAA TAGCTGTAGA AAATGAAGAT 
CTATCTGCAA AAAGTGCCGT AACTATTACA AATAATAATT CCATAATATT GAGCGGGAAT 
AATTCCATGG GAATTTATAC AAATTATGGA ATAATAAATA ACAGCAGCGG TAAAATTATA 
AAATTAACCG GAGATAATTC CGTAGGATTA TACGCTACAA ACGGAACAAG TGTACAAAAC 
TCGGGAGATA TCTATATCAA CGGAGCTGGA ATTTACGCTA CATCATATAA AGCAGACGGG 
GTAAGCCAGA CTTTTGGCGA CGGAAAGACC TCTATAGTGA ATTCCGGAAC AGTTACAAGC 
GGTTCAAAGG CTAATTCTGT CGGAATATAT TCCAGAAATA ATTCAGGTGG AACAGTTTCA 
TCCAATGATT TTACACTGGA TTTATCTTCC GGAGAAATAA ACATGACAGG TTCATCAGGA 
GGAACAGCTG TTTATGCAGA AAAAACAAAA GTAACAGACA GTGGCTCGAC GATAAGTGTA 
GGTGAAAAAG GAATAGCTTT GTACGCGAAA GATAGTGATG TAACTTTAAA CGGATCTGTA 
ATTAATCTGC TGGGGGACAA TGCAATAGGC TTTTATCTGG AAGGAGGAAC AGCTTTTAAC 
GGAACGGGAA CTATAAATAT CGACGGTAAG AACATAATTT TGATGATACC CGGAGCCAGC 
ACAACTGTTT CAAATAACTT TACTGTAGGG ACTGTAACAT CGGGCTCTAC ATATACACTA 
AATGCCATGG TTGACAGTAT ATATACATAT ACAGGGACAG CTGCCTTAGA AAGCAACGGA 
ACTCTGATAA ACGGAGTAAG AACAGCTGCT TATATAGGCA ATCCGGGAGG TGTTTATGCT 
AACCCTGGAG CAGAAAATAT AGGAGCAATT GTATTAAACG GGCAGTATAC TGCCGGAGGA 
ACACTGCCGG CCGGAATGAG TGCAGGGGTA GACGGTGAGA ATGCAGGAAC TGTTATTTTA 
GGAAATGCAT CTGCCGGATT ATACGGAACA AACGGAACAA GACTTGGTAA TACAGGAACA 
ATTCAGGTAA ATGATAATTC CGGTGCCATA ATTACATCCG GATCAGGTTC TCTTGGACAA 
AACAGCGGAT TTATCAGCAT TGGTGCGAAT TCACAGGCTA TATATGTAAA GAACGGGGAT 
ACTGTTAATA ATATGGCTTT TGGAAGTATT GAGAGTGCAG GACAAAAAGC TGTCGGACTG 
TTTGCTGATA CAGTAAATAC CGTTGTTAAT GACGGGTATA TAAATATGAC AGGTGCAAAT 
TCCATGGGAA TTTATACAGC AGGAGCTAAC AGCACCTCAA TAACCAATAA TGGCGCTGTT 
ACAATCGGGG CTTCTTCTGA TCCTGATAAT CCTTCCATAG GAATATACAG CAGCTCGTCA 
TCTGTAATTA ACAATAACGG CAGTATAGCT TCCGGAGAAA ACTCTGTAGG GATATATAGT 
AATAACGGGA CGGTAAATCA AAACGGAGCC TTGAATGTCG GAACGAACGG GATAGGTCTA 
TATCTTTCAG GGGGAGCAGC CAATATAACC AGTAATGCTT CGTTCAGTCT AGGGACTAAT 
GCAGCAGGGG TTTATGCTGA AAATGCAGGT ATTTCAAATG CTTCAAATAT GAGTGTAAAT 
AATAACAGTT ACGGCTTTGT ACTAACGAAC AGTGCATTTT CAAATACAGC TAATAATGTG 
TCTCTTGGAA CAAATTCCGT TTTCGTATAT GCAGGCGGCG GAACGAATAT TAATAACGGT 
AATATAATAA TGAACGGTTC AGATAATATA GCTTTTTATA CTTTTGACGG TGCAAGAGTA 
GAAAACTATG GTACCATAAC AGGAACTGCA GGAACAGCTA ATGTTGGAAT ATATAATAAA 
GGCGGTTCGG TTTTAAATGA TGTTTCCGGA GTAATCTCCG TCGGTGATTC AATCCTTGCA 
AATGAAGAAT ATGCTGTGGG AATTTATGGA GTAAACTCTG CCATTAGTAA TTCCGGGACA 
ATATATGCGG GCTCTGGAGC TGTAGGTATA GCAGCAGAAG GTGGAAGAGC AGAAAACACA 
GGGAATATTA CAGCAGTAGG AACTCAGTCT ATAGGAATGT ATACCGAAGG TGGAATTATA 
GTTAATGAAA CCGGCGGTTT GATTACTGTT TCCGGAAAAG ATGCCATCGG TATGGCCGGA 
AAAGGCAGCG GATCACAAAT AATAAATAAC GGTATCATAA ATGTAACGGG AAATAATTCC 
AAAGGGATAT ACGGAGTAGA AGGAGCCACA GTTATAAATA ACGGAAAAAT TTATGCGGCG 
GGGAGTAATG CAGCAGGAAT TGTTTTAGAC AGCAAATCAA CCCTTGTAGT TTCCGGAACT 
GGAGAAATAA TAACTAACAG TATAGCAGCA GGAAACAGCT ATAGAGAAAT GACAGCATAC 
GACACTCCGG AAATAATCAA CTCAGGAGTA ATACAGGTAT TGGAAAAATT TGAAACTGAC 
GGACTAAAGG TTACTATAAA AGTAGATCCT TCTTCTATGA CAACGCCGGA AACTTCGGTT 
GTTTCATCCG GAGGGTACGA TAATGTTGAT ATGGATGCTG AATATTTAAT ATCTAATGCG 
GTAAAAATAA AGGCACCTTC ATTCAGCATA AGTAATGCTA TGGAAATAAC AGCTGATTAT 
GCTCTAGGAA CAAATTTGAA CAAATATAAA CTGGAGGATG TCCTTGTTTC GGGCAGTAAT 
GTAGCGGCTA ATTCTTCTGA TATTGCCGTA AAAAGCAGAT CATTAACCTG GGAAGCCACT 
CCTGTGACTA ATTCCAAGGG AAATATCGAT ATATGGATGA CCAGAATTTC TTATTCAAAA 
TTTACTGACG GACTTTGGTA TGAGGATTTT GGAAGAACTC TTGATGAAAA ATATACTTCT 
GCAGGAAATG ATGATGCTTT GAAAATATAT GATAAAATTG ATCTTATAGA AAATGAAGTA 
GATTTCAGAC ATGTAATGGG AAGTATGGCA GGCAATATAT ATGCTAATAT AAATCAGAGA 
GAAGAAGATA TAACAGGAGC ATTTGAAAAT ACATTACAAT TATTGCAGAA TTCAGAAAAT 
AATACAAAAG AAAATGTAAA GCTGGGTGTA ATAGCAGGAA AAGGTAAGAA CAAAGAGGAA 
ACAGACGGAG TTGCAGGCTA TGATTATACA ACGACAGGAA TACTGGCTCT GCGTGAAGTA 
GAAAGAACAT ATAAACATAC CTTTGGTTAT TCTTTGGGTT ATACTCACAC AGGATTTGAA 
TTCCAGGACG GAAATGAAAG TGAGGAATGG GTAGATACAA TACAGCTTGG AGTACATAAT 
AAATATAAGA CAAACGGCTG GGCGCTAAGA AATGATTTTA CGGGAAGAGC AAGTATTCAT 
AATACAGACA GAAATATAGA CTGGCCGTCA CCGAATAACA GATCAGAAAT GAATGGAACG 
TATGAGACAT ACAGTGTAAC AAGTGACAAT ATACTTGGAA AAGAAATAGA GCTCAGTAAA 
AATGTAAGCC TAATGCCTTA CGGCGCATTC AGATTAATGT ATGTGACAAG ACCGTCATTC 
AGTGAAAGCG GTCTTGAGGC TTTGGAAATA GAAGGAAATG ATGTGTGGAG TGTGAAGCCC 
GGAGCAGGTC TGGAACTGAA CGGGAAAGTA TCATTAGGAA GAAACTGGCA GTTAAAGGGA 
ACTCTTGATT TTTTATATGA ATATGAACTT GCTGATATGA ATGTAAGAGA AAAAGCAAAG 
CTGAATGCAA TAGAGGACGG ATATCACAAG TTATCAAAGC CACAGGATGA AAACGGAATA 
TTCAGTACAA AAGCAGCTGT GGGATTGGAA GCAGCAGACA GATACGGAAT ATTTCTGACA 
GGGGAGTATA AAACAGGCAA TAACAGTAAA AATGACTACA GAACAGGTGT GGTATTAAAA 
GCGGTGTTTT AA 

 

Protein sequence

MKVNKKMLTM LALNILAVMP AIAGESKTDR LYNNIVKNIQ TGKSNNSNYK LIENILKQKN 
KDLKDLYLQG NYVEKPEYLE WQIFFSGFYE EYNNGKDNTG ENAEYNSKTS GYYDANGNYV 
LTEHSVNGIP VKPYAEAQDG KYINLGINIQ VKEVVKDVLT LNPSPVVPVN LALSIGNVSV 
PVIGSIAPVN VPQFSITQPN INITTPAGIN IVIPSLSAYT NWTSITGAQW ANNTQYGNVN 
LTSPSYKTSD GINAIAQYTI SGDYYADSDT IMYVDVSQTR AVTVDLTEDL GKPSSNVYTT 
FTNYGKIYLT ALSTAGLEIQ SDNRGEHPTL KNSGLIEGQN KTQVGMIFTP EGSTDINATY 
IMENTSSGQI IMGGNDSSGM AVNKMGARPL FLINALNTGL IETRGLNNYG IALDLNNLNS 
ASSILNKGII NVKGDKSGGI VLKGSIGNTD DNVVNKGNIN VTSSTSFGIY SNVSDTKYVN 
EGNIDLTSAA NSIGLRNEGG LLKNGSNGII NLTNGTNNIG LYSTDGTTEN NGKIIISNGT 
DNIGIYAKGS GTSVVNSGEI NAVSSGKIKG IAVTDNADIT NTKDIKLNGQ SGSVGIYASN 
YGTFTSSGTG DVDIKVSGTD SVGIYSENNG LVAVNGNIEA ADNAINLYAS NGKILLTDAA 
LTTKANSLLF YMTNNGKFSL TNTQADIENS GAAFYYDASS LGAITSGIMS GYISNMFLSG 
SNSVLNMSQD SILVSVNNAA VNLSNLPDLR TTLGSVGINV SGTGYKSYLL YKSNLTVDQN 
ANLDTDILGT IGLSATGVVN NSEITGTLAD KKAIAVENED LSAKSAVTIT NNNSIILSGN 
NSMGIYTNYG IINNSSGKII KLTGDNSVGL YATNGTSVQN SGDIYINGAG IYATSYKADG 
VSQTFGDGKT SIVNSGTVTS GSKANSVGIY SRNNSGGTVS SNDFTLDLSS GEINMTGSSG 
GTAVYAEKTK VTDSGSTISV GEKGIALYAK DSDVTLNGSV INLLGDNAIG FYLEGGTAFN 
GTGTINIDGK NIILMIPGAS TTVSNNFTVG TVTSGSTYTL NAMVDSIYTY TGTAALESNG 
TLINGVRTAA YIGNPGGVYA NPGAENIGAI VLNGQYTAGG TLPAGMSAGV DGENAGTVIL 
GNASAGLYGT NGTRLGNTGT IQVNDNSGAI ITSGSGSLGQ NSGFISIGAN SQAIYVKNGD 
TVNNMAFGSI ESAGQKAVGL FADTVNTVVN DGYINMTGAN SMGIYTAGAN STSITNNGAV 
TIGASSDPDN PSIGIYSSSS SVINNNGSIA SGENSVGIYS NNGTVNQNGA LNVGTNGIGL 
YLSGGAANIT SNASFSLGTN AAGVYAENAG ISNASNMSVN NNSYGFVLTN SAFSNTANNV 
SLGTNSVFVY AGGGTNINNG NIIMNGSDNI AFYTFDGARV ENYGTITGTA GTANVGIYNK 
GGSVLNDVSG VISVGDSILA NEEYAVGIYG VNSAISNSGT IYAGSGAVGI AAEGGRAENT 
GNITAVGTQS IGMYTEGGII VNETGGLITV SGKDAIGMAG KGSGSQIINN GIINVTGNNS 
KGIYGVEGAT VINNGKIYAA GSNAAGIVLD SKSTLVVSGT GEIITNSIAA GNSYREMTAY 
DTPEIINSGV IQVLEKFETD GLKVTIKVDP SSMTTPETSV VSSGGYDNVD MDAEYLISNA 
VKIKAPSFSI SNAMEITADY ALGTNLNKYK LEDVLVSGSN VAANSSDIAV KSRSLTWEAT 
PVTNSKGNID IWMTRISYSK FTDGLWYEDF GRTLDEKYTS AGNDDALKIY DKIDLIENEV 
DFRHVMGSMA GNIYANINQR EEDITGAFEN TLQLLQNSEN NTKENVKLGV IAGKGKNKEE 
TDGVAGYDYT TTGILALREV ERTYKHTFGY SLGYTHTGFE FQDGNESEEW VDTIQLGVHN 
KYKTNGWALR NDFTGRASIH NTDRNIDWPS PNNRSEMNGT YETYSVTSDN ILGKEIELSK 
NVSLMPYGAF RLMYVTRPSF SESGLEALEI EGNDVWSVKP GAGLELNGKV SLGRNWQLKG 
TLDFLYEYEL ADMNVREKAK LNAIEDGYHK LSKPQDENGI FSTKAAVGLE AADRYGIFLT 
GEYKTGNNSK NDYRTGVVLK AVF