Gene Sterm_0319 details

Gene Information

• Locus tag: Sterm_0319
• ID: 8595814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 352710
• End bp: 359129
• Gene Length: 6420 bp
• Protein Length: 2139 aa
• Translation table: 11
• GC content: 38%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003307134
• Protein GI: 269118957

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACGA ACAAAAAATT ATTAGTATCA TTTATGGCAT TAAATGCGGT ATTATCAACC 
GGTATAGAGG CTTCGGGAGC TTCGGCGCCG TCAAAATACG ACAGAATGTA TAATAATATG 
ATAAAAAATC TTGATCAGAA TAAATCTAAC AGTAAAAATT ACCAGATAAT AGAGCAGGTA 
CTTAATAAAA AAAACAAAGA GCTGAAAGAT TTGTACATAC AGAGTGATTA TATCATAAAG 
CCGGAATATC TTGAATGGCA GGTATTCTTT TCGGGAGGTT ATGAAGAATA TGGAAAGGGT 
GTAGATAACA GTTCCGATAA TGCAAAGTAC AGTTCAAAAG TAACAGGATA TTATGATACC 
AGCGGAAATT ATGTGGTTAC CAGTGGGAAT AAAGGAGGAA CTTTAGGAAA ACCATACCAG 
CCGCTGCAGA CACCCAAGGA AATAAATCTG GGGGTAAATA TACCAATCAG CGGAATCAGC 
CGTGATCCTT TGAATCTGAC TATAAATCCT AAAACAGTCA CTGTAGTGGC TCCAAGTCAG 
AAAACAGTAC CGGCGCCTAA CCCTAATGTA GTTCTTTTAA ATCTCAGCGG TATAGAAGTA 
CCGACTGCTC CTGTTCCGCC TACAGGACTT GGAAGTTCGG GAATTATCAT AAATCCGAAT 
CAGATTTATT CGACTAATTC ACAATTTACG ACAGGAGTAG GAACCATAAC CGGTGGTACT 
TACGCCATAG ATTCTGCACC ATACAGCAGT TTATATACAT TTACGACAAA TAATGAAACT 
TTAAATTTTA CAGGAAATAT AGATATTAAC GGAAATACGG GAGTAATTGT GAGTAATAGC 
GGACCGACTA CTATAACAGG GGCTTCCATT ACCAATGATT CAACAATGAC TGTGAAATCC 
AGCGGTTCAG GGCTGGGAGG ATTTCATTCA AACAATAGTA CAGCTGGTTA TTTGGATTTT 
ATAAATAATA ATATACTTGA TATAGAGTAT GTTTCAGGTT CAGGTGCTAC ACAAAGTCTG 
TTTTTTTACG GGAATATAAA CTTGAAAAAT AATGGAACCA TAAATTATGT AAATAATGAC 
GGCGGAACAA AGGCTTTATA TTCTATGTGG AATTCCTCTC CGGCGGATCC TAATCCGATG 
AGAGTAGAAA ACAACGGAAC AATAAACATA ATTGGAAATT CAAGTTTAAG TTATTCAAGT 
ACTGTTATGG CACACCATTT CGGACATTTG ACTTCTACAG CCCTCGGGCA GCATACGGTT 
ATAAATAACG GGACAATAGA TCTGACAAAT GCTCTCGGTT ATCTGCAGGA TTATTCTACC 
GGTGTTTATG ATGCTTCAGG CGGCGGAATT ATGAATGTGA GAGAAAATTC TGTGGGTATT 
GAGCTGACGT TAACAGGGAA TTCGGAAAAT ATTTTTAACA GTTCAACATT AAAAGTGGGA 
ACAATAAATG TTTACGGATC TACTAATACT GGAGGACAGT ATAGTAAAGC TATAAACATG 
AGTCTTAACG CATTTCCAAA TGTAATAGTA AATATTTCCG ACGGTGAAAT AAATCTGGAA 
TCAAATTCAA TGGGAATTAT AACGAATATT CCGGGTACTC AGACTATAAA TAATTCTGCT 
GAAATTAATA TATCGGGAGA AAATTCTTAC GGAATAATAA CTTATAATAA TTCGGCCAGT 
GCCGGAAGTA TTGAAAATAC CGGGGATATA ACACTGGATG TTAATAATAC ATCAAAATTA 
AGTGCGGGAA TTTTTCACCA GATAGCTCCC TCATTTGTAA ATAAAGGGAA TATATATGTA 
AAATCAACAG GAAGCAACGC TGAAGGAACT ATAGGGATTT TGCTGTCACA GGGTGCAAAA 
TTTACAAATG ACGGCGGCGG AACGAAAGTA ATAAGTGTGG ACGGAAGAAA AGCAACAGGA 
GTGTTTGCTA ATCAAAATAC CACTAATACA ATAAAAAATA CGGCAGTAAA AGTGGCTAAC 
AGCGGAATAG GCTTTTTCTC ATATAACGGC TCTGATATTA AGCTTGAGAA TATTACAGCA 
GAAGCATCTG CCGGAGGAAT ATTATTTTAT TCTTCCTCTA CACCTTCAAA TTCTACAATA 
ACATTTGTAA ATTCTTCATC AGCAACGGTA AAAGACGGAG GAACTGCTTT TTATGTAGAC 
GGACCTCTGT CAATGATTCC GACCTCTTAT GTGAATTTGA ATAATCTTAA TTTGAAAATG 
GAGGACGGCT CTACGGTATT CCTGCTTGAC AGTCCGGGGA CATACTCGAT AGGAGCTCTG 
CCGACAGCTT CTATGGCAGG ATTAAATATA GATCCTTCAT CAGGGAATTA TAAAGATGTA 
ACAATAAACA GAGGAACTAT TAATATTGAT AATGTAGGCG GAAATCAGGT CTTTGATCTG 
GATAATCCTA ACGACGCACT TAATAAAAAT AGTTTTTATT CTTCGAATCT TAATCTGATA 
ACAGGGAGTA CTATACAAGG CAGCGGAAGC GGTCAGCTTG CAATGGGGCA GACTTCTTAC 
ACGGGTGCTG CTTCCAATGC ATTGGTAACG CTGACTAATG GCGGAACTAT ACAGCTTAGT 
GGTGCATCAT CAGTCGGGAT GTATTCTAAT TACGGAACTC TTAATAATAA TACAGCAATA 
AACGTTACAG GGACTGACAG TGTGGGAATG TATGGCGAAA ACGGAACAGC GGTTATAAAT 
TCGGGTAGTA TTACGATAGG AAATAAAGGT GTAGGAATAT ACGGGATTTC AAATCAGAAT 
ATTTTATCTC CTGCATCATA CGGAGATCAG AAAGTAAATA TAACGAATAA TACTTCTATA 
GTTTCCAACG CGGGGACAGC AGGAACAGTG GGAATATATG CCAATAATAA CGCAGGAACA 
ACAGGGAATA ATCTGATATT TGGCACAGGG TCAGTTATAA ATCTCGGAGC CAGTGACAGT 
GCAATAGGTG TATATGCGAA TCAGATTGAT AATGTTCAGG CTCGAGGGGT AATAACTGTT 
GGAAGCAACG GGATCGGGAT GTATGCAAAT AACAGTAATA TTACTTTAAA CAATTTTACA 
ATAAATTTGA ACGGTGATAA TGCTCTGGGA TACTATATAG AAGGAAACAG CTCTTCTTTT 
ACAGGAAACG GGACAATAAA TATAGATGGT CAGAATGTTA CTTTGTTTAA TATAAATTCA 
AACAGTCCGG CTGTAGATTT CAGCGGAATA ACAGTGGGGA CAGTTACAGC CGGTTCTAAT 
TACACGCTCG GAAGTCTGAC TAACGGAAAA ATGACTTATG CTTCAGATGC AAGGCTGGCT 
ACAAACGGAA CAATGTTAAA CGGAAGAAAT ACTAATATTT ATTTAAACGG GACTTCAGAT 
ATAAAAGCAG AAGCCGGAGC AACAGGTGTG GTAGCTGTGG CACTGGACGG GCAGTATACT 
GGCGGAGCTC CTATTACACC GGGAGTAGAC GGAAAGAATG ACGGGCAAAT TATATTAGGA 
AACAGCTCTG TAGGCTTATA CGGAAAAAAT GATGCAAGAT TTGAAAATAC TCATATAATA 
ACAGTAGGAG ATGATTCTGC CGGAATATAT ACGGACGGAG CGCTTGCAAG TATTAAGAAT 
ACAGGAACAA TAACAATTGG TAATAATTCA CAGGGACTGT ATCTTAAGAA TGGAGATACA 
ATAGATAACG GAGGATCAAT ATTAAGTTTG GGAATAAGTA CAGTTGGTAT TTTTGCGGAT 
AATGTAACAA ATCCCGTGAT AAATACCGGT ATAATAGATT TATCCGGCGA TAAATCAGTG 
GGAATTTATA AAACTGGTGC TGTTAATTCT ATTTCAAATA ACAATATTAT AAAAATAGGA 
GATTCATCTG ATTTGAATGA TCCGGGCATA GGAATATATT CTAATACTGC AGGGGATATA 
ATAACAAACT CCGGAACTAT AGATACCGGG AAAAATTCAA TAGGGATATA TGCAGAAGGC 
GCAGCAGTAA ATCAAAATAA CATACTGTCA GTCGGAGCAA CAGGAACTGG TATATATACA 
AAAGGCGGGA CAGTAACTCT GGGAGCCGGA AGCAATATAA CAGTGGGTTC TAATGAATCA 
GTAGGTGTAT ACGGAACTAA CGGAACACAT ATAACTAATA ACAGTACAAA CGCAGTTAAT 
ATAAATAACG GAGGATACGG CTTTATACTG GAAACTGGAT CTCTTCTGGA CAATCACGGG 
ATACTGTCAT TAAACGGAAA AGGGACAGGA GTGTATTCTG ACGGATTAAA CACTGTAAAT 
AACTATACAG GAGCCGATAT AAACATGTCA GGTGATAATA ATATAGGTAT TTATATGGTT 
TCGGGCGGTA TTGTAAATAA TGATGCAGAT ATAAACGGTG CTGCTGGAAA ATCCAATATA 
GGAATATATA ACAAAAACGG TACGATTAAT AATATAGGAA CTATAAATGT AGGAAATTCA 
GTACTTGTAT ATAAGTCAGA CGGAACAGTG GATTATGACA AAAGCGGCTA TGCAGTGGGA 
ATATACGGCG ACGGTTCTTA TATAAATAAC ACAGGCAATA TAACTGTAGG AGAGAACGGA 
ATAGGGCTGT ATACCAGAAA TAACCCGGCA GCAGTGGTAA ATAAAGGCAA TATAACTGGA 
ACAGGAAAAG GTGCTGTTGG TTTATTTGTA GATAACGGGG TAGTGGAAAA TAATCTTGGT 
ACTACAATAA CAATGACAGG CGATGATTCG ATAGGAATGG TGGCTAATAA GAACGGAACA 
ATAATAAATA ACGGAGATAT AATAATGTCT GGTAATAATG TATCCGGAAT GTTTGCCAAC 
ATAAATTCTC ATTCTGTAAA TAACGGGACA ATTGATATGA CAGGAGCAAC AGGTGACAAA 
AGTACGGCAT TTTTATTAGG GGCAGGTTCG ACTTTTGAAA ATAACGGGAC ATTACTTCTG 
GGATCAAATG CCGTTATATC AGGTGTGGCG GGAGAAACTT ACAAAATACC GAGTATAGTA 
AACGGAGGTA TAATTTACTC AGACGGTGCA CTGGCTGCAG ACGGAATATC TCTGGCAATA 
AAGGTAAACC CTGAAACTGT AGTTTATCAG TCGTTATCTT CAGGTCCGCA GTTTACAGCT 
AACGGAACTT CGATAATAGC TGATACTCTT ACTACAAGCA AGCCTATAGT TGTACTTCCC 
GGATTTGCAG ACGGAACTAA TGCTAATGTA TATAAGATAG AAAATGCAGT AGTGGCTTCC 
GGCGGAAATT ACGAATTTGT AAGCGGATCG TTATTATGGG AAGCAACTCC TGAAGCAACA 
GGTACAGGAG CAAATGTATA TATGGAAAGA AAAAGCTTTA CGGAATTTAC TGACGGATTA 
TGGTTTGAGG ATTTTGGAAA CGCTCTTGAG AAAAATTTCC TTGGTTCTAG AGGAGATGCA 
ATGAAAATTT ACAATAAAAC AGGTTATATT GAAACAGAAG AAGATTTCAG ACAGATAATG 
GGAAGTCTCG CAGGAAATGT GTACGCAAAT ATGAATCAAA GAGAAAATGA TATAGCCAGA 
ACATTGGAAA ATTCAATGCT TACTTTACAT GAATCACCTA ATAATACAAA AGAAAATGTA 
AAAATAAATA TTATAGGCGG AAAAGGGAAA AATAAAGAAG AAACAGACGG AGTTACGCCG 
TATGATTATA CAACAGCAGG AGTTCTGGCA TTAAGAGAGG TCGAACGTAC ATACAGACAT 
ACATTTGGTT ATTCATTGGG ATATCTGCAT ACAGGATTTG AATTTAAAGA TGGTAATGAA 
AGCGAAGAGA AAGCAGATAC AATTCAGGTC GGAGCACATA ATAAATACAG AGCAGGCGGC 
TGGGAACTGA GAAATGATCT TACAGGAAGA GTAAGCTTCC ATAATGTGGA CAGAAATATT 
GACTGGGGAT CATCGCTTGG AAAATCGGAA ATGAACGGGA CATATGAAAC ATACAGCATA 
ACAAGTGATA ATATACTTGG AAAGAAATTT GAGATTGGTA AAAAAACAAG TATAATGCCA 
TATGGCGCAT TCAGGGCAAT GTATGTAACA AGACCGACAT TCAGCGAAAG CGGTCTGGAA 
TCTCTTGAGG TAGAAGGAAA TGATGCGTGG AGTGTAAAGC CGAGAGCAGG ACTGGAACTG 
TCAGGTTCAC TGCCGCTGGG AAGCAAAGCA GTCTGGCAGC TAAAGGGAAC TTTGGATTTT 
GCTTATGAAT ACGAGCTTGC AGATCTGAAT GAAAGAGAAA AAGCAAGATT AACAGCGATA 
GAAAGCGGTT ATCACAAACT TGCAAAGCCG CAGGATGAAA AAGGAATTTT CAGAACAAAA 
GGAATGCTGG GAATAGCTGT AGAAGACAGA TATGGATTGT TTTTAACCGG TGAATACTCA 
ACAGGAAATG ACAAAGAAGA TGATTATAGA ACCGGATTAA TACTTAAAGC AGTATTCTAA 

 

Protein sequence

MKTNKKLLVS FMALNAVLST GIEASGASAP SKYDRMYNNM IKNLDQNKSN SKNYQIIEQV 
LNKKNKELKD LYIQSDYIIK PEYLEWQVFF SGGYEEYGKG VDNSSDNAKY SSKVTGYYDT 
SGNYVVTSGN KGGTLGKPYQ PLQTPKEINL GVNIPISGIS RDPLNLTINP KTVTVVAPSQ 
KTVPAPNPNV VLLNLSGIEV PTAPVPPTGL GSSGIIINPN QIYSTNSQFT TGVGTITGGT 
YAIDSAPYSS LYTFTTNNET LNFTGNIDIN GNTGVIVSNS GPTTITGASI TNDSTMTVKS 
SGSGLGGFHS NNSTAGYLDF INNNILDIEY VSGSGATQSL FFYGNINLKN NGTINYVNND 
GGTKALYSMW NSSPADPNPM RVENNGTINI IGNSSLSYSS TVMAHHFGHL TSTALGQHTV 
INNGTIDLTN ALGYLQDYST GVYDASGGGI MNVRENSVGI ELTLTGNSEN IFNSSTLKVG 
TINVYGSTNT GGQYSKAINM SLNAFPNVIV NISDGEINLE SNSMGIITNI PGTQTINNSA 
EINISGENSY GIITYNNSAS AGSIENTGDI TLDVNNTSKL SAGIFHQIAP SFVNKGNIYV 
KSTGSNAEGT IGILLSQGAK FTNDGGGTKV ISVDGRKATG VFANQNTTNT IKNTAVKVAN 
SGIGFFSYNG SDIKLENITA EASAGGILFY SSSTPSNSTI TFVNSSSATV KDGGTAFYVD 
GPLSMIPTSY VNLNNLNLKM EDGSTVFLLD SPGTYSIGAL PTASMAGLNI DPSSGNYKDV 
TINRGTINID NVGGNQVFDL DNPNDALNKN SFYSSNLNLI TGSTIQGSGS GQLAMGQTSY 
TGAASNALVT LTNGGTIQLS GASSVGMYSN YGTLNNNTAI NVTGTDSVGM YGENGTAVIN 
SGSITIGNKG VGIYGISNQN ILSPASYGDQ KVNITNNTSI VSNAGTAGTV GIYANNNAGT 
TGNNLIFGTG SVINLGASDS AIGVYANQID NVQARGVITV GSNGIGMYAN NSNITLNNFT 
INLNGDNALG YYIEGNSSSF TGNGTINIDG QNVTLFNINS NSPAVDFSGI TVGTVTAGSN 
YTLGSLTNGK MTYASDARLA TNGTMLNGRN TNIYLNGTSD IKAEAGATGV VAVALDGQYT 
GGAPITPGVD GKNDGQIILG NSSVGLYGKN DARFENTHII TVGDDSAGIY TDGALASIKN 
TGTITIGNNS QGLYLKNGDT IDNGGSILSL GISTVGIFAD NVTNPVINTG IIDLSGDKSV 
GIYKTGAVNS ISNNNIIKIG DSSDLNDPGI GIYSNTAGDI ITNSGTIDTG KNSIGIYAEG 
AAVNQNNILS VGATGTGIYT KGGTVTLGAG SNITVGSNES VGVYGTNGTH ITNNSTNAVN 
INNGGYGFIL ETGSLLDNHG ILSLNGKGTG VYSDGLNTVN NYTGADINMS GDNNIGIYMV 
SGGIVNNDAD INGAAGKSNI GIYNKNGTIN NIGTINVGNS VLVYKSDGTV DYDKSGYAVG 
IYGDGSYINN TGNITVGENG IGLYTRNNPA AVVNKGNITG TGKGAVGLFV DNGVVENNLG 
TTITMTGDDS IGMVANKNGT IINNGDIIMS GNNVSGMFAN INSHSVNNGT IDMTGATGDK 
STAFLLGAGS TFENNGTLLL GSNAVISGVA GETYKIPSIV NGGIIYSDGA LAADGISLAI 
KVNPETVVYQ SLSSGPQFTA NGTSIIADTL TTSKPIVVLP GFADGTNANV YKIENAVVAS 
GGNYEFVSGS LLWEATPEAT GTGANVYMER KSFTEFTDGL WFEDFGNALE KNFLGSRGDA 
MKIYNKTGYI ETEEDFRQIM GSLAGNVYAN MNQRENDIAR TLENSMLTLH ESPNNTKENV 
KINIIGGKGK NKEETDGVTP YDYTTAGVLA LREVERTYRH TFGYSLGYLH TGFEFKDGNE 
SEEKADTIQV GAHNKYRAGG WELRNDLTGR VSFHNVDRNI DWGSSLGKSE MNGTYETYSI 
TSDNILGKKF EIGKKTSIMP YGAFRAMYVT RPTFSESGLE SLEVEGNDAW SVKPRAGLEL 
SGSLPLGSKA VWQLKGTLDF AYEYELADLN EREKARLTAI ESGYHKLAKP QDEKGIFRTK 
GMLGIAVEDR YGLFLTGEYS TGNDKEDDYR TGLILKAVF