| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0135 |
|---|
| Symbol | |
|---|
| ID | 8595631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 143825 |
|---|
| End bp | 146557 |
|---|
| Gene Length | 2733 bp |
|---|
| Protein Length | 910 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | outer membrane autotransporter barrel domain protein |
|---|
| Protein accession | YP_003306951 |
|---|
| Protein GI | 269118774 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TATTGTTATT ACCATTAATA CTAACCAGTA TATTAAGTTG CGGCAGTTCT
GGAGGCGGCG GAGGTTCCGG AGGTGGAGGC AGCGGGGCAA CAGCGACACC TGTGGCTCCT
TCTATTCCGT TCAATCCCGG TGACCCTCAT AATGTTCAGG AAACCAGATC TGAAGGGTAT
GACGGGGCAG GTGTAACCGT AGGAATTATT GACACAAGGT TTAATGTCAC TAATGCAGAA
TTTAAGGACA GCAGCGGAAA TTCACGGCTG AGTGAGGATG CTTCTTTTGT CGGAGTGAAT
AATATTCACG GGAGTCTTGT AGCGGAAGTT ATAGGAGGGA AAACCATAGG TATGGCACCT
GATGTAAAAA TGTACGGAGC AGCAGCAGGC GCTGTATGCA GTGACGGGAC TAACAGATGT
ATAAGTCCTA AAGTACGGAT GTACGAGGAT TTATATAACA GCGGCGTAAG AATATTTAAC
CAGTCCTTCG GAATAGATTC ATTATCAGTT ACAGATGCGA AAAAAACTGA TTTTCCATTA
TCAGATCCTG TTATTAATTT TTATGCCGAA AAGGCAGGAA CAGATAGTTT ATTTATATGG
GCAAACGGAA ATGCAGGAAA AGATCAGCCG CAGATAGAAT CAGGACTTCC TTATCTTTAT
CCCGAACTGC AAAAAGGCTG GATAGCGGTA ACAGCCGTGG ATTCCCAAAC TGGAGAAATA
AGCAGTTATG CCAACAAATG CGGTGTTGCA CAAAACTGGT GTATAGCGGC TGTAGGAGAC
TATACTTTTC ACGTAAGTAA TGTAACAGGA GAAGGAACAT CATTTGCATC ACCGGCAGTA
ACAGGGGCAG CAGCTCTTGT ACAGCAGAAA TATCCTTGGA TGAACGGAGA TCTGATAAGA
CAGAGTATTT TGTCCACAGC TACCGATGTA GGAGCAGCAG GAGTAGATGC AGTATACGGC
TGGGGTCTGC TGAATGCCTC AAAGGCAGCA AACGGACCTG CGTTATTTGA TAAAAGGCTG
GCACTTGGCG ATTATGTGAA TGTTTCTTTT GATAACTATA CATCTACATT TTCCAATAAT
ATCAGCGGAG ATGCTGGTTT GACAAAGAGC GGAAGCGGAA CATTAATCCT AAGCGGAAAT
AATACTTATA CAGGTAAAAA TATAGTAAAC GGCGGTATAC TGAAAGTAAA CGGACAGGTA
CTCTCACAGG TAGATATTCA GTCAAACGGA ACCCTTTTGG TAGACGGGGG AATAATACAA
AATAATGTAC TTAATCACGG GGGAACCATG ATAAATGAAG GAAACGGAAC TACTATACAC
GGGATTTATA TGGCCAGCAG TGAAGCGGTG ACAGAACACG CAATGGGAGC AGAATTTAAA
GTTCACGGCA GAGTAATCTT AAATAATTCA AAATTATATA TAAAGACACC AGGAGCCGGA
CATAATATTT ATAAATATAT AAATTCTTCA GAAGGAATAA GCGGAAGAGT ACTCAGTGCT
TCTGAAGGAA TAGAAAGTAC CTTTGGTTCT GTTGTTGTTC CTGTACTGCT GAATTCAGAA
ATAACACAGG ATTCCAATAA TATAGATCTG AAGATTACAA GAAAGAATGT AGCTGAATTC
AGCGCAGCAG AATATAATTC AGATTCTACA CGAAATAATT CATCGGAAAA TCTGGAAAAG
GTATTTCAGG TTTTGGATAA CAGTGAAGCC AATGAGCTTT TCAGAGTACA GGCAGCACTT
ATTCAGCAGT CATCTTCACA TACATTTGCA GTGACTCTGG ACAGTATTTC AGGACAGATT
TATGCATCGG CACAGGCTCT TACATTTCAG CAGATGCAGG CTGTGAATAA AGATTTGTCG
AACAGGCTTT CGATGGCAGG CTATAATAAG GACAATACCG GAGTATGGTT TAATGCACTT
GGAGGAGCCG GACAGCTCTA TGAATCGGGC TATGCAAAGG CGGACACTCA TTTTTACGGC
GGACAGCTGG GAGTGGATAA AAATATAACA GATAATATCA TATTAGGGGC AGCAGCGGCA
TTTACAGAAG CAAAAGCAGA TTTTGACAGA TATGCCGGAA AGGCAAAAAG TCAGAATGTA
GGAATTTCAC TATATGGAAA ATATACCTTT GCGGGAGATA ATATGTATAT GCTCGGAAGA
GTGGGAGCAG CATATATAAC AAGTGATGTG GACAGAGATG TAGTGATTGG AAATTATGCG
GAAAAGCTTT CTGCTGATCA TGATGATTAT GCTTTTTCTG GATATGGAGA ACTCGGGTAT
AAATTTATGG TAACAGAAAA TATAGGTCTG ACACCATTTG CAGGATTAAT GTATGAAAGC
GTAAGAAGAG GAAGTTTCTC GGAAGATGAC AGTCTTTTTG GATTAAAGGC AGACAGCAAA
ACTTACAATC AGAGTTCAGG ACTGGTGGGT GTGAAAGCAG AAACTACTTT TAACTGGATG
GCTGGAAAAA CAACACTTCA AAGTTATTTG ACATGGCAGG GAGCTTTTAA TGATGAAGAT
CTGAGCTTTG ATGCTGCTTA TACAGGAATG CCGGATCAAA AATTCAAGGT AGAAGGAATA
GGACTGGCAG ATAATACAAC CTGGTTTGGA ATAGGTGCAC TTACTGAAAT AACTGCGGTG
TGGTCATGGT ATGCCAATTA TGATATGCAG ATAGAAAAAT CAAGAATAAT GAATAATGTA
TTTTCTGTCG GGGCAAGATA CAGTTTCCAC TAG
|
|---|
| Protein sequence | MKRILLLPLI LTSILSCGSS GGGGGSGGGG SGATATPVAP SIPFNPGDPH NVQETRSEGY
DGAGVTVGII DTRFNVTNAE FKDSSGNSRL SEDASFVGVN NIHGSLVAEV IGGKTIGMAP
DVKMYGAAAG AVCSDGTNRC ISPKVRMYED LYNSGVRIFN QSFGIDSLSV TDAKKTDFPL
SDPVINFYAE KAGTDSLFIW ANGNAGKDQP QIESGLPYLY PELQKGWIAV TAVDSQTGEI
SSYANKCGVA QNWCIAAVGD YTFHVSNVTG EGTSFASPAV TGAAALVQQK YPWMNGDLIR
QSILSTATDV GAAGVDAVYG WGLLNASKAA NGPALFDKRL ALGDYVNVSF DNYTSTFSNN
ISGDAGLTKS GSGTLILSGN NTYTGKNIVN GGILKVNGQV LSQVDIQSNG TLLVDGGIIQ
NNVLNHGGTM INEGNGTTIH GIYMASSEAV TEHAMGAEFK VHGRVILNNS KLYIKTPGAG
HNIYKYINSS EGISGRVLSA SEGIESTFGS VVVPVLLNSE ITQDSNNIDL KITRKNVAEF
SAAEYNSDST RNNSSENLEK VFQVLDNSEA NELFRVQAAL IQQSSSHTFA VTLDSISGQI
YASAQALTFQ QMQAVNKDLS NRLSMAGYNK DNTGVWFNAL GGAGQLYESG YAKADTHFYG
GQLGVDKNIT DNIILGAAAA FTEAKADFDR YAGKAKSQNV GISLYGKYTF AGDNMYMLGR
VGAAYITSDV DRDVVIGNYA EKLSADHDDY AFSGYGELGY KFMVTENIGL TPFAGLMYES
VRRGSFSEDD SLFGLKADSK TYNQSSGLVG VKAETTFNWM AGKTTLQSYL TWQGAFNDED
LSFDAAYTGM PDQKFKVEGI GLADNTTWFG IGALTEITAV WSWYANYDMQ IEKSRIMNNV
FSVGARYSFH
|
|---|
| |