Gene Sterm_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0108 
Symbol 
ID8595604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp115783 
End bp117372 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content39% 
IMG OID 
Product2-isopropylmalate synthase/homocitrate synthase family protein 
Protein accessionYP_003306924 
Protein GI269118747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAG TTGAAGTCTT TGATACAACT TTAAGAGATG GTGCACAGGC GCGGGGAATA 
TCATTTTCAG TAAAGGATAA AATAGCTGTA ACTCAGGCTC TTGATGCTTT CGGAATAGAC
TATATCGAGG CCGGGAATCC CGGTTCCAAT CCAAAGGATC TGGAGTTTTT TGAACTCGTC
AAATCTGTGG AGCTGAAGCA TTCAAAGCTT GTAGCCTTTG GCAGTACAAG AAGAAAGGAC
GTGGCTCCCG AGGAGGATCA GAATCTTATT TCACTGCTGC AGGCAGGAAC GGAATATGTT
TCCATATTCG GAAAAAGCTG GGATTTTCAT GTTACGGATA TTATAAAAAC AACACTTGAA
AATAATCTGG AAATGATAAA GGATACACTG TTATTTTTAA AATCAAAAGG AAAGAAAGTT
ATATTTGATG CAGAGCATTT TTTTGACGGG TATAAAAATA ATCCGGAATA TGCATTAGAG
GCTCTAAAAG CTGCAAAAGA CGGCGGAGCA GAGATACTTA CCCTTTGTGA TACAAACGGG
GGATGCTTTC CTGAAGAAAT TTCAAGAATA ACAAAAGAAG TAAAAGAAAA ACTTGGTGAT
ATAAAAATAG GAATTCATGC ACATAATGAT ATGGGCTTCG GAGTGGCGAA TTCTATAGCA
GCAGTGGAAG CAGGAGCCCT GCAGGTACAG GGGACATTTC TCGGATACGG CGAAAGATGC
GGAAATGCTA ATTTATCTAC AATAATAGCT AATTTGCAGC TGAAAAAAGA TTATGAACTT
GTTCCACGTG AAAAGCTGGG TCTTCTTACA AGCACTGCAA GAATAATAGC AGAGATTTCA
AATATAACAA TAGAAGATTC CATGCCTTAT ATAGGGAAAA ATGCTTTTGC ACATAAGGGT
GGGATGCATA TAGACGGTGT CTCCAAAGCC TCACACTCTT TTGAACATAT AAATCCCGAG
CTGGTCGGAA ATGAAAGAGA GTTTCTTCTT TCGGAGGTAT CAGGAAGGTC AACTATTCTT
GAGGAAATCA GGAGAGTGGA TAAGGATATA CAGAGAGATT CGGAAGCTAC AGCTGGAATT
ATAGAAAGAC TTAAGGAGCT GGAATATCAA GGCTATCAAT TTGAAGGGGC AAAGGCTACA
TTTGAGCTTG TCATAAGAAA GTATCTGGGT AAATATAAAC CGTTTTTTGA TCTGGTGTAT
TTTGATGTAA AGGGTAACTA TATCGGGAAA AAATATTATT CCACAGCTGT GGTAAAAGTA
AAGGTAAAGG ATCAGATAGA GCTTACTGTT GCTGAGGGCG ACGGGCCTGT AAATGCGCTT
GACCAGGCAC TTAGAATAGC TCTTGAGAGA TTTTATCCCG AATTGAAAGA GATGCATCTG
ATTGATTACA AGGTTAGGGT ATTGAAGGGT GAGGAAAATG CTACAGCTTC AAAAGTAAGG
GTTCTTATAG AATCGGCTGA TGCCAAAAAT TCATGGACAA CTATAGGAGT TTCTACTGAC
ATAATAGAAG CCAGCTGGAT AGCTCTTGTA GATTCCATAG AGTACAAGCT GATACAGGAA
ACGCTGAAAA GGCTCGAGGA TTTTGGATAA
 
Protein sequence
MIKVEVFDTT LRDGAQARGI SFSVKDKIAV TQALDAFGID YIEAGNPGSN PKDLEFFELV 
KSVELKHSKL VAFGSTRRKD VAPEEDQNLI SLLQAGTEYV SIFGKSWDFH VTDIIKTTLE
NNLEMIKDTL LFLKSKGKKV IFDAEHFFDG YKNNPEYALE ALKAAKDGGA EILTLCDTNG
GCFPEEISRI TKEVKEKLGD IKIGIHAHND MGFGVANSIA AVEAGALQVQ GTFLGYGERC
GNANLSTIIA NLQLKKDYEL VPREKLGLLT STARIIAEIS NITIEDSMPY IGKNAFAHKG
GMHIDGVSKA SHSFEHINPE LVGNEREFLL SEVSGRSTIL EEIRRVDKDI QRDSEATAGI
IERLKELEYQ GYQFEGAKAT FELVIRKYLG KYKPFFDLVY FDVKGNYIGK KYYSTAVVKV
KVKDQIELTV AEGDGPVNAL DQALRIALER FYPELKEMHL IDYKVRVLKG EENATASKVR
VLIESADAKN SWTTIGVSTD IIEASWIALV DSIEYKLIQE TLKRLEDFG