Gene Sterm_0013 details

Gene Information

• Locus tag: Sterm_0013
• ID: 8595512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 13279
• End bp: 20109
• Gene Length: 6831 bp
• Protein Length: 2276 aa
• Translation table: 11
• GC content: 37%
• Product: Autotransporter beta- domain protein
• Protein accession: YP_003306832
• Protein GI: 269118655

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAA ATAAAAAATT ATTAGTAGGA TTTTTAGCAG TAAATTCTAT ACTAAATGCG 
AGTACAGGCA GCAATGATAA TGTGATTAAA AATGATAAGT TATTTAATAA AATGGTAAAA 
AATATAGAAT CAGGAAAATC TAATGATGAA AATTATAAAT TAATTGAGAA AATTTTGAAT 
AAAAGGAATG CAGAACTGAA GGATTTATAT CTGCAGAATG ATTATGTGGT AAAACCTGAA 
TATCTTGAAT GGCAATGGTT TGCTACAGGA TTTTATACAG AAAGAGGCCG TGGTGATAAT 
ACATCGGACA ATGCACAGTA TCGTTCGACA ACAGAAGGAT ATTACAATGA AGACGGTGAA 
TATATAGTAA CAGAGGGAAA ACCGTATATG CCTGTTCAGG GAGTAAAAAC CATCAATCTG 
GGAATGAGCA TTCCAGTTAA AGGGCTGAAT TTAGGGGCAA TTTCTATTAG TCCCGGAGAA 
GTAAAGCTTC CCAATATAGA AGAAGTAACT GTGAATATAA CAGTACCAAG CACACCTACA 
GTGGGAAATG TAAATTTACC TGCATTTACA CCAACAGCAC CTGCTGTAAA TACTCCTTCT 
ATATTTACGC CGCCTGCACT GGATAAAGTA TCTACAGGAT TTGCACAGGG AGATCCTGTG 
GGATTCAGAC CTCAGATAAA TGTCATATTG GGAAATTCAA GTGCAGCACC TATAAGCGGT 
ACAACGACAG TGACTTCACT GGGCACTTCA CAGTTTTCCA TAACAGGATC CGGTTTCACA 
TGGAACGGAT ACAATGACAG TACAACAACA TCCGGGACTG TCACTACAGG AACATATTCA 
ATGAATACAA ACAGTTATCC TTATACATTT TTAAATGTTC TGGCAGGATC ATCTACACTC 
AGCGGAAACT GGATATATCG GAATCAGACT ACAGGTGCTT CACCTAATAC TGCCAGATTT 
GTCAGTGTAA ACCATGCTTA TGGTGCAAGA CATCTGAATA CGGAATTTCA TCTTGCTGGA 
GACACTTCTA TATATGGAAG AAATGACGGT CATATGACAG TAGGTATAGA ATATCAGGCA 
TATGATGCTT TAAGCGCGAA GGCAATTATA GATTCCGGAA CGACTCTTAC TCTTGAAAGC 
GGTAAAAATC TTTTTGGAAT GACTTTAATG ATAGAAAGCC CGTATTACAG GGATGATTTT 
ACAAAAATAC CTATAGATAC AACTTGTGCT TCAGGGATAT GCAGACCAAT GGAAAATCTT 
CCTATATATT CTACAGCGGA AAATAGAGGA AAAATAGTAA TAAACAGTCA AGAAAGTATA 
GGAATTGATT TTGCAAAATA TACAGTTCCC TCATCAGACG GATCTAATCC AATGGCTATT 
TATGTGAAGC CGGGAAATAT TGAGATAAAC GGAAGTTCAA ACTACGGGAT AAGAGTCCCT 
AATATTTTTG ACTACGGGAA TCTGGGCGGA GCATATTCAA GAACAAGCCA GCTGGGTACA 
GTAGTATACA GCAGTAACGG GAAAGAACAA AATTACTTTA AAGAAACAAT AATAGACGGC 
TCAGGCGGAA TGGTAACTGT AGGCGGAAGC CAAAACGTGG GAATTTCTCT GTCAAAAAAG 
ATAACAGGAT CTACCCAGGT AGCAGGCGTT CAGGGATTAA CAGCTTCAGA TTCTGCTGAT 
CTTATTGGAA ATATAAGAAA TTTAAATATA ACAGTAAATG GAACTGAGGG AATAGGAATA 
CTCAGAAATG CAAACTATGT GGAAAAAGAT GATTCTACAG GTCTTCCGTT TGGAGATATA 
GTATTAAAAA ATATAAATGT GGAAAGTCTG AGCTTTGGAA CTGAAGCTGA AAAATCAGTA 
CTTATCAGAA GTGACAGATC AAAGCTGATA CTGGAAAAAG ACCTTATTCT GACTTCGACA 
CTTTCAGCGG GAAAATCGGA TAATATAGTA ATGCTTGCTA ATAATTCAGC AACAGCAAAC 
GCTTTAGATC CTTTGTATAC TGCAAAAGCA GAAAATAGGG CAGAAATAAA TATAGGAGCA 
GGACTGTATA AAACAACAGG ACTTCTTTCT GCAAACGGAG GAGAAGCAAC AAACAGCACT 
GCCGGTGAGA TAATAGTAAA TTCGGAAGAA TCGCAGGGAA TGGCAGTACT TGTTAATTCT 
AAGGGCTTTA ACAGCGGAAT TATAACTGTA CTGGGGACAA AGTCCGTAGG TATAGCCAAT 
ATGGGAGAAT TTACCATGAC AGCTGGGGAA ATAGATGCTT CAGGTGATCA GTCCGTAGGA 
GTTTACGGGG CTGACAATAA TAATAAAACA AATATAAACG GCGGTACAGT AAAGGTATCA 
AACAACGGAA TAGGTTTTTT TGCCGGAGAT AATGCTACAA TTAATATAAG CGGGGCTTCC 
CTTGAAGCAA ATGACAAAGG ACTTTTGTTT TATACATATA AAAATTCTTC TGCATTAACA 
TCCTCAGGTC ATATAAACAT AACAGGAACG GTAAATGCCA CGATAAATGC CGGAGGAACA 
GCTTTTTATC TGAAAGATGA CCTTAGTCAG ATAACTAACT TTATAAACAG TGTATTTACA 
GGAAGCGGTA AACTTAATCT GAATATGGCA AGCTCTGATT CAAGACTGTT TATTCTTGAT 
TCACCGGCAA ATGACATATA TCTGAGCAGT TCTTCAAGCT CTGCAATAGA ATCACTGATT 
CCGTCATCAA AGGTAAGCAT CACGGGAACA GGATATAAGC CTTATGCAGT ATTTAAGGGA 
ACTCTTGTGG TAGACCAGAA TGTAAATCTT GACGATACAA ACGATGCATA TAACAGACTG 
GATTTCATGT CATCAAAAAC AATTATTAAT CCGGGAATTA TAATGTCAGG TACAGGAAAT 
AATGTATCGG CAGTGGGACA GAGAAATTAT ACAGGAACAA GCGGAAGAAA TGAAGTAATT 
GTTATAAATA ACGGAACAAT AAAACAAACT GGACAAAATG TAATAGGAAT AGTAACAGAC 
TATGGAAATA TAACTAATGC AGGATTAATA AGCTCTACAG GTGATAATTC AATAGGAATA 
TACGGAGCAA ACGGAACAAT AAGCAAAAAT ACCGGGAAAA TAGAAATAGG AAATACCGGA 
ATAGGAATAT ACGGAGGAAA TCTGCTTACA GCTTCTGCTC CGGGGTATGG CGATCAGAAA 
ATAGAAATAG AAAATGACAG TGAAATAAAA TCGGCGGGAG CAACCGGGGG AATAGGAATA 
TATGCAGATA ATACAGCTCT GGCATTAGGA GATTCCACAG TAAAACTTGG TACAAATTCT 
GATATAAATA TGGTATCGGC TGAAAACGGA GTGGGAGTAT ACGGTAAAAC TACCACAGTC 
AGCGGCGGAG GTACAATATC TGTCGGGAAA AACGGAATAG GAATGCATCT TTTGGATAGT 
ACAGCCGGAT TAAGTAATAT AACTATGAAT TTATCAGGTG ATAATGCTGT AGGATATAAT 
ATTGCCGGAA CAAGTACTTT TACAGGAAGC GGGGTTTTCA ACACAAACGG AAATAATACA 
GTATTATTTA ATATGCAGAA AACAGCGCCA AGTACTGCAT ATATAGACTT CTCAGGCTTT 
AGTGTAAGCG GAACCGGGAA TTATGTAGGC GGAAATATAG AAAATGCAGG TTTTTATTAT 
AGTAATTCAG GAACAGTAAA TGAAAAAAGT ACAATAGCAG CCGGAAAAAA TTCTGTAATA 
TTATTTGATG CAGGAACTAA CATAAATGCA TCAGGAAGCA GTAATGTAAT AGGAATAGCC 
GACGGAACAT ACAATGGCGG AATGCCTTTT TCATTCGCAG GTACGACAGC TGATAAAGAG 
CTTACAAACA GAGGAATAAT ATCAGCGGGT GATAAATCAG CAGTTCTTTA TGCCAAAAAT 
AATGCTGCAA TGCTAAATGC CGGAACTGTT ACTGTAGGAA AAGAGTCTGT AGGATTATAT 
GGTGTAAGCG TTAATGATGT AGAAAACAAA GGAACAATTA ATGTAGGAGA AAATTCAAAG 
GGAATCTACC TGAAAGACGG GGTACTTACA GGAGTATTGA ATTCAGGAAA GATATTAAGC 
TCATCTGATA CAGCAGTAGG GATAATTTCT GATTACAACG GCGGAAGTAC GACTTTGATA 
AAAACAACTG ATGAAATAAA ACTAACAGGA GAAAATTCTG TAGGAATTTA TACTACCGGA 
ACCGGTATAC AGAATGTAGA AAATATAGGA CTTATAGAAA TAGGAGCTTC TTCTGACAGA 
AATAATCCAG GAATGGCAAT TTATAATACA GGTATAGGAA ATACAGTTTT GAATACTGGG 
ACAATTACAG CAGGAAATAA TTCACTTGGA ATTTACAGTA AAGGCGGAGC TGTAACTGAA 
AGCGGCAATC TTAATGTCGG AAACAGCGGT ACGGGAATAT ATTCAGACGG AGGAAGTGTA 
ATAATTAACA ATCTCGGTTC TATGAATATA GGAGCAAATG CAGCAGTAGG AGTATATGGA 
GCAAATAATG CAAATATTCA GAATAACTTT GCCAATATAG GGATAGGAAA CGGAAGCTAC 
GGATTTATAG CTGAGAGCGG ATCAAACGTT ACCAATACAG CAGCTCAGAT ACTTGGGGAA 
AACTCCGTTC TTGTTTACGG AAACGGAGCA GGAAATATTA TAAATACAGC AAGCGGAAAT 
ATTAGTGCAG CAGGTTCGGG AAATATAGTG TTTTATACAA CAGGCGGCGG AACGGTAATA 
AATGACGGAA ATATAACAGC TGATATAGGG AAAAGCAATA TAGGAATTTA TAATAACGGA 
GGAAGCATAA CCAATACAGG AACTGTATCT GTCGGTGATA CTGAACTTGC TTATGATTCA 
TCAGGTAATG TGGATGTATT AAACAGCAGA TATGCAGTGG GAATTTACGG AGAAGCATCA 
AAAGTAGAGA ATCACGGAAA CCTGAATATA GGAAATAATG CTGTAGGATT ATATGTGAAG 
GATAACACTA TAACAGCATT AAATTATGGG AATATATACG CAGGAACATC AGCAAGCCCT 
AAAAATGGAG CAATAGGAAT CTTTTCAGAA GGCGGGGCAG GAGTAGAAAA TCACGGAAAT 
ATTACTTTAT ATGGTAATGA TGTAATAGGA ATAGCCGGAA AAGGGTCTGC AAAAGTAACA 
AATCACGGAA TAATAACAGT AGAGGGACAA GGGGCAACCG GAATTTACGG AACTCTTAAT 
ACAGTAGTTG ATAATCAGGG AACTATAAAT GTATCCGGAA CGGACAGTGT AGGAATAATA 
GCACCTAAAG GAAAGATACT GAATAACGGA ACGATAAACT TTATAAACGG TGCCAAGATG 
ACAGCTATGG ATAATGAATA TGAAATACCT GAGCTAATCA ATGCAGGGAT AATAAAAGTA 
AACGGAAATT TTGAAAATGA AGGAATGAAA ATATCGCTAA AGCCTGATTT GAACACACTA 
CAGGAATCAT CAGTAGCAGG AATAGATTTT GTAATGAACA GCGGAAGTAT CTCAGCAGAT 
ACACTTACAA TAACAGATAC GGTAAAAATT CTTCCTGATT TTTCACAGGG AACAAATGCC 
AAGGTGTATA AACTGGAGAA TGCTTTTATA TCAAGCAATA TAATATCTGT GACAGGAAAA 
CTTCCTGTGG TAAGTAATTC ACTGACTTGG GAAGCAACAC CTTCGGTAAA TTCAGACGGA 
AATATAGATA TCTATATGTC AAAGATAGAT TATCATGATT TTACCGACGG ACTGTGGTAT 
GATGATTTTG GAAAAGCTCT TGATGAAAAT TATTATGGAT CAGCAGGAGA TGCCGGAAAA 
ATCTATGACA AGCTGGATCT TATTGAAAAC GAAAAAGATT TCAGGCATGT AATGGAAAGC 
CTTGCAGGGA ATATTTATGC CAATATAAAC CAGCGTGAGG AAGATATCGC AAGAAGCTTT 
GAAAATTCAA TGACTTTAAT GCAGAATTCC GATAATAACA CAAAAGAAAA TGTAAAGATA 
AATATAATTG CGGGGAAAGG AAGAACTAAA GAAGATACAG ACGGGATTGT AAACTATGAT 
TATACAACAA CCGGAGTACT TGCCCTGCGT GAAGTAGAGA GAACTTACAA GCATACATTC 
GGATATTCCC TTGGATATCT GCACACAGGA TTTGAATTTA AAGATGGAAA CAGCAGTGAG 
GAATGGGTAG ATACTGTGCA GATGGGAGTT CACAATAAGT ATAAAGCAAA CGGATGGAAT 
CTGAGAAATG ATCTTACAGG AAGAGTAAGT TTTCATAATA TAGACAGAAA TATAGACTGG 
CCTTCTCCTA CAGGCAGATC AGAAATGAAC GGAAGCTATG AGACATATAG TATAACAAGT 
GACAATATTT TCGGAAAAGA GCTTTCGGTA GGAAAAAATA CAAGTATAGT ACCATATGGA 
GCATTGCGTG CAATGTATGT AACAAGACCT GATTTTAGCG AGAGCGGGGA AGAATCACTA 
AAAGTAGAAG GTAACGATGC ATGGAGTGTA AAACCAAGAG CCGGAGTAGA ATTGAAGACA 
GCAGTACCTT TATCTGATTC GGGATGGCAG CTGAAAGGAG CTCTTGACAT AGCATATGAA 
TATGAGCTTG CGGATCTGAA TGAAAGAGAA TATGCAAAAT TATCAGCGGT AGAAAATAAT 
TATCATAAAT TATCAAAACC GGAAGATGAA AAGGGAACAT TAAGAACAAG AGCATCAGTG 
GGAGTAGAAG TAAAAGACAG ATATGGAATA TTCCTGACTG GAGAATACGG AGTAGGAAAT 
AACAGCGAGG ATGATTATAG AGCAGGGTTA ACATTAAAAG CAGTATTTTA A 

 

Protein sequence

MRKNKKLLVG FLAVNSILNA STGSNDNVIK NDKLFNKMVK NIESGKSNDE NYKLIEKILN 
KRNAELKDLY LQNDYVVKPE YLEWQWFATG FYTERGRGDN TSDNAQYRST TEGYYNEDGE 
YIVTEGKPYM PVQGVKTINL GMSIPVKGLN LGAISISPGE VKLPNIEEVT VNITVPSTPT 
VGNVNLPAFT PTAPAVNTPS IFTPPALDKV STGFAQGDPV GFRPQINVIL GNSSAAPISG 
TTTVTSLGTS QFSITGSGFT WNGYNDSTTT SGTVTTGTYS MNTNSYPYTF LNVLAGSSTL 
SGNWIYRNQT TGASPNTARF VSVNHAYGAR HLNTEFHLAG DTSIYGRNDG HMTVGIEYQA 
YDALSAKAII DSGTTLTLES GKNLFGMTLM IESPYYRDDF TKIPIDTTCA SGICRPMENL 
PIYSTAENRG KIVINSQESI GIDFAKYTVP SSDGSNPMAI YVKPGNIEIN GSSNYGIRVP 
NIFDYGNLGG AYSRTSQLGT VVYSSNGKEQ NYFKETIIDG SGGMVTVGGS QNVGISLSKK 
ITGSTQVAGV QGLTASDSAD LIGNIRNLNI TVNGTEGIGI LRNANYVEKD DSTGLPFGDI 
VLKNINVESL SFGTEAEKSV LIRSDRSKLI LEKDLILTST LSAGKSDNIV MLANNSATAN 
ALDPLYTAKA ENRAEINIGA GLYKTTGLLS ANGGEATNST AGEIIVNSEE SQGMAVLVNS 
KGFNSGIITV LGTKSVGIAN MGEFTMTAGE IDASGDQSVG VYGADNNNKT NINGGTVKVS 
NNGIGFFAGD NATINISGAS LEANDKGLLF YTYKNSSALT SSGHINITGT VNATINAGGT 
AFYLKDDLSQ ITNFINSVFT GSGKLNLNMA SSDSRLFILD SPANDIYLSS SSSSAIESLI 
PSSKVSITGT GYKPYAVFKG TLVVDQNVNL DDTNDAYNRL DFMSSKTIIN PGIIMSGTGN 
NVSAVGQRNY TGTSGRNEVI VINNGTIKQT GQNVIGIVTD YGNITNAGLI SSTGDNSIGI 
YGANGTISKN TGKIEIGNTG IGIYGGNLLT ASAPGYGDQK IEIENDSEIK SAGATGGIGI 
YADNTALALG DSTVKLGTNS DINMVSAENG VGVYGKTTTV SGGGTISVGK NGIGMHLLDS 
TAGLSNITMN LSGDNAVGYN IAGTSTFTGS GVFNTNGNNT VLFNMQKTAP STAYIDFSGF 
SVSGTGNYVG GNIENAGFYY SNSGTVNEKS TIAAGKNSVI LFDAGTNINA SGSSNVIGIA 
DGTYNGGMPF SFAGTTADKE LTNRGIISAG DKSAVLYAKN NAAMLNAGTV TVGKESVGLY 
GVSVNDVENK GTINVGENSK GIYLKDGVLT GVLNSGKILS SSDTAVGIIS DYNGGSTTLI 
KTTDEIKLTG ENSVGIYTTG TGIQNVENIG LIEIGASSDR NNPGMAIYNT GIGNTVLNTG 
TITAGNNSLG IYSKGGAVTE SGNLNVGNSG TGIYSDGGSV IINNLGSMNI GANAAVGVYG 
ANNANIQNNF ANIGIGNGSY GFIAESGSNV TNTAAQILGE NSVLVYGNGA GNIINTASGN 
ISAAGSGNIV FYTTGGGTVI NDGNITADIG KSNIGIYNNG GSITNTGTVS VGDTELAYDS 
SGNVDVLNSR YAVGIYGEAS KVENHGNLNI GNNAVGLYVK DNTITALNYG NIYAGTSASP 
KNGAIGIFSE GGAGVENHGN ITLYGNDVIG IAGKGSAKVT NHGIITVEGQ GATGIYGTLN 
TVVDNQGTIN VSGTDSVGII APKGKILNNG TINFINGAKM TAMDNEYEIP ELINAGIIKV 
NGNFENEGMK ISLKPDLNTL QESSVAGIDF VMNSGSISAD TLTITDTVKI LPDFSQGTNA 
KVYKLENAFI SSNIISVTGK LPVVSNSLTW EATPSVNSDG NIDIYMSKID YHDFTDGLWY 
DDFGKALDEN YYGSAGDAGK IYDKLDLIEN EKDFRHVMES LAGNIYANIN QREEDIARSF 
ENSMTLMQNS DNNTKENVKI NIIAGKGRTK EDTDGIVNYD YTTTGVLALR EVERTYKHTF 
GYSLGYLHTG FEFKDGNSSE EWVDTVQMGV HNKYKANGWN LRNDLTGRVS FHNIDRNIDW 
PSPTGRSEMN GSYETYSITS DNIFGKELSV GKNTSIVPYG ALRAMYVTRP DFSESGEESL 
KVEGNDAWSV KPRAGVELKT AVPLSDSGWQ LKGALDIAYE YELADLNERE YAKLSAVENN 
YHKLSKPEDE KGTLRTRASV GVEVKDRYGI FLTGEYGVGN NSEDDYRAGL TLKAVF