Gene Sterm_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0007 
Symbol 
ID8595506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp5057 
End bp6985 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content40% 
IMG OID 
ProductDNA gyrase, B subunit 
Protein accessionYP_003306826 
Protein GI269118649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000235506 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA ATTATAACGC GGAGAGTATA ACGGTCCTTG AGGGACTTGA GGCCGTTAGA 
AAAAGACCAG GAATGTACAT TGGTTCCACA TCGGCCAAGG GACTTCACCA TTTAGTCTGG
GAAGTAGTTG ATAATAGTGT CGATGAGGCT TTGGCAGGAT TTTGCGACAC TATAAAAGTA
AGAGTACTGG AAGATAATAT AATAGAGGTA ATCGATAACG GGAGAGGTAT CCCGGTAGAA
ATGCACGAAA AAATGGGGAA GTCAACTCTT GAAGTAGTTT TAACAGTGCT GCATGCCGGA
GGAAAATTTA ATAATGATAA CTATAAGGTT TCCGGAGGAC TTCACGGGGT AGGGGTTTCA
GTAGTTAATG CCCTTTCTGA AACCCTTGAG GCCATCATAA CAAAAGACGG GAAAGTATGG
TATCAAAAAT ATCACAGAGG AGTACCCGAA GAAGATATAA AGCAGATAGG CGAAGCGCCG
GAAGATGCTC ACGGAACTAC AATAAGATTC AAAGCTGACG GTGAAATATT TGAAACGTTG
GAATATGATT ATGAAATTTT GCTTACAAGA CTAAAGGAAA TGGCTTATTT AAACAAAGGC
TTAAGAATAA TTCTAAGTGA CGAGAGACAG AAAGATAAAC CGAAAACAGA CGATCTGCAT
TTCGAAGGGG GAATAAGAGA CTTCCTTTCA GAGATAGCAG ATGATGAAAG AGTGCTGGAT
GATATAATAT ACATGGATGA TTCAGTGGAG CTGGACAACA AAAAAAGAGT AGAAGTGGAA
ATAGCCATGA CATACACAAT TTCACAAAGA GAAATGGTTT ATTCATTCGT AAATAATATA
AATACTCATG AGGGAGGAAC ACATGTAAGC GGCTACAGAA CAGCACTTAC AAGAGTTCTT
AACGAGATTT CCAAGCAGAT GGGACTGGTA AAGGATAAGG ACGGTTCTTT TCAGGGATCT
GATGTAAGAG AAGGTCTGGT GGCTATCTTA AGCATAAAAA TTCCAGAACC GCAGTTCGAA
GGACAGACAA AAACAAAGCT CGGAAACAGT GAAATAACAG GTGTAGTATC CGGAATAGTG
GGAAGCTCGC TTAAGATGTA TCTGGAGGAT CATCCTAAAG AAGCTTCAAA CATAATAGAA
AAGATATTAA TGTCGAAAAA GGCAAGAGAA GCTGCAAAAA AAGCAAGAGA GCTGGTACTA
AGAAAGAGCT CGCTGGAAGT AGGCTCGCTT CCCGGAAAGC TGGCAGACTG TTCATCAAAA
GATGCTTCAG AATGTGAAAT ATACATAGTC GAAGGAGATT CGGCAGGAGG TTCGGCAAAA
CAGGGAAGAG ACAGAAGATT TCAGGCTATA CTTCCTTTGA GAGGTAAAAT ATTAAACGTA
GAAAAAGCAG GAATAGGAAG AGCTTTGGAA AATGCTGAAA TAAGAGCAAT GATTACTGCA
TTCGGAGCCG GATTCGGCGA TGAAATGGAT CTGGAAAAAT TAAGATATCA TAAGATAATA
ATCATGACTG ATGCCGATGT GGACGGAGCA CATATAAGAA CACTGATGCT TACTTTCTTC
TACAGACATC TGAGAGAGCT GATAAATGAG GGACACATAT ATATTGCACA GCCGCCGTTA
TATAAGGTAC AGGCCGGAAA GCAGATACAG TATGTATATT CGGATGAGCA GCTGCAGAGT
GTTACTAAAG TAATGGATCA GGAAAACAAA AGATACGGTA TACAGAGATA TAAGGGTCTT
GGAGAGATGA ATCCCGAACA GCTGTGGGAA ACAACAATGG ATCCTGAAGT AAGAACTCTG
CTGAAAGTAT CACTGGAGGA TGCCACATAC GCAGATAAAA TGTTTAATGT ACTGATGGGA
GATAAAGTAG AGCCTAGAAG ACAATTTATA GAAGAACATG CACAGTATGT AAGAAACTTA
GATATCTAA
 
Protein sequence
MSDNYNAESI TVLEGLEAVR KRPGMYIGST SAKGLHHLVW EVVDNSVDEA LAGFCDTIKV 
RVLEDNIIEV IDNGRGIPVE MHEKMGKSTL EVVLTVLHAG GKFNNDNYKV SGGLHGVGVS
VVNALSETLE AIITKDGKVW YQKYHRGVPE EDIKQIGEAP EDAHGTTIRF KADGEIFETL
EYDYEILLTR LKEMAYLNKG LRIILSDERQ KDKPKTDDLH FEGGIRDFLS EIADDERVLD
DIIYMDDSVE LDNKKRVEVE IAMTYTISQR EMVYSFVNNI NTHEGGTHVS GYRTALTRVL
NEISKQMGLV KDKDGSFQGS DVREGLVAIL SIKIPEPQFE GQTKTKLGNS EITGVVSGIV
GSSLKMYLED HPKEASNIIE KILMSKKARE AAKKARELVL RKSSLEVGSL PGKLADCSSK
DASECEIYIV EGDSAGGSAK QGRDRRFQAI LPLRGKILNV EKAGIGRALE NAEIRAMITA
FGAGFGDEMD LEKLRYHKII IMTDADVDGA HIRTLMLTFF YRHLRELINE GHIYIAQPPL
YKVQAGKQIQ YVYSDEQLQS VTKVMDQENK RYGIQRYKGL GEMNPEQLWE TTMDPEVRTL
LKVSLEDATY ADKMFNVLMG DKVEPRRQFI EEHAQYVRNL DI