Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0007 |
Symbol | |
ID | 8595506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 5057 |
End bp | 6985 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | DNA gyrase, B subunit |
Protein accession | YP_003306826 |
Protein GI | 269118649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000235506 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA ATTATAACGC GGAGAGTATA ACGGTCCTTG AGGGACTTGA GGCCGTTAGA AAAAGACCAG GAATGTACAT TGGTTCCACA TCGGCCAAGG GACTTCACCA TTTAGTCTGG GAAGTAGTTG ATAATAGTGT CGATGAGGCT TTGGCAGGAT TTTGCGACAC TATAAAAGTA AGAGTACTGG AAGATAATAT AATAGAGGTA ATCGATAACG GGAGAGGTAT CCCGGTAGAA ATGCACGAAA AAATGGGGAA GTCAACTCTT GAAGTAGTTT TAACAGTGCT GCATGCCGGA GGAAAATTTA ATAATGATAA CTATAAGGTT TCCGGAGGAC TTCACGGGGT AGGGGTTTCA GTAGTTAATG CCCTTTCTGA AACCCTTGAG GCCATCATAA CAAAAGACGG GAAAGTATGG TATCAAAAAT ATCACAGAGG AGTACCCGAA GAAGATATAA AGCAGATAGG CGAAGCGCCG GAAGATGCTC ACGGAACTAC AATAAGATTC AAAGCTGACG GTGAAATATT TGAAACGTTG GAATATGATT ATGAAATTTT GCTTACAAGA CTAAAGGAAA TGGCTTATTT AAACAAAGGC TTAAGAATAA TTCTAAGTGA CGAGAGACAG AAAGATAAAC CGAAAACAGA CGATCTGCAT TTCGAAGGGG GAATAAGAGA CTTCCTTTCA GAGATAGCAG ATGATGAAAG AGTGCTGGAT GATATAATAT ACATGGATGA TTCAGTGGAG CTGGACAACA AAAAAAGAGT AGAAGTGGAA ATAGCCATGA CATACACAAT TTCACAAAGA GAAATGGTTT ATTCATTCGT AAATAATATA AATACTCATG AGGGAGGAAC ACATGTAAGC GGCTACAGAA CAGCACTTAC AAGAGTTCTT AACGAGATTT CCAAGCAGAT GGGACTGGTA AAGGATAAGG ACGGTTCTTT TCAGGGATCT GATGTAAGAG AAGGTCTGGT GGCTATCTTA AGCATAAAAA TTCCAGAACC GCAGTTCGAA GGACAGACAA AAACAAAGCT CGGAAACAGT GAAATAACAG GTGTAGTATC CGGAATAGTG GGAAGCTCGC TTAAGATGTA TCTGGAGGAT CATCCTAAAG AAGCTTCAAA CATAATAGAA AAGATATTAA TGTCGAAAAA GGCAAGAGAA GCTGCAAAAA AAGCAAGAGA GCTGGTACTA AGAAAGAGCT CGCTGGAAGT AGGCTCGCTT CCCGGAAAGC TGGCAGACTG TTCATCAAAA GATGCTTCAG AATGTGAAAT ATACATAGTC GAAGGAGATT CGGCAGGAGG TTCGGCAAAA CAGGGAAGAG ACAGAAGATT TCAGGCTATA CTTCCTTTGA GAGGTAAAAT ATTAAACGTA GAAAAAGCAG GAATAGGAAG AGCTTTGGAA AATGCTGAAA TAAGAGCAAT GATTACTGCA TTCGGAGCCG GATTCGGCGA TGAAATGGAT CTGGAAAAAT TAAGATATCA TAAGATAATA ATCATGACTG ATGCCGATGT GGACGGAGCA CATATAAGAA CACTGATGCT TACTTTCTTC TACAGACATC TGAGAGAGCT GATAAATGAG GGACACATAT ATATTGCACA GCCGCCGTTA TATAAGGTAC AGGCCGGAAA GCAGATACAG TATGTATATT CGGATGAGCA GCTGCAGAGT GTTACTAAAG TAATGGATCA GGAAAACAAA AGATACGGTA TACAGAGATA TAAGGGTCTT GGAGAGATGA ATCCCGAACA GCTGTGGGAA ACAACAATGG ATCCTGAAGT AAGAACTCTG CTGAAAGTAT CACTGGAGGA TGCCACATAC GCAGATAAAA TGTTTAATGT ACTGATGGGA GATAAAGTAG AGCCTAGAAG ACAATTTATA GAAGAACATG CACAGTATGT AAGAAACTTA GATATCTAA
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Protein sequence | MSDNYNAESI TVLEGLEAVR KRPGMYIGST SAKGLHHLVW EVVDNSVDEA LAGFCDTIKV RVLEDNIIEV IDNGRGIPVE MHEKMGKSTL EVVLTVLHAG GKFNNDNYKV SGGLHGVGVS VVNALSETLE AIITKDGKVW YQKYHRGVPE EDIKQIGEAP EDAHGTTIRF KADGEIFETL EYDYEILLTR LKEMAYLNKG LRIILSDERQ KDKPKTDDLH FEGGIRDFLS EIADDERVLD DIIYMDDSVE LDNKKRVEVE IAMTYTISQR EMVYSFVNNI NTHEGGTHVS GYRTALTRVL NEISKQMGLV KDKDGSFQGS DVREGLVAIL SIKIPEPQFE GQTKTKLGNS EITGVVSGIV GSSLKMYLED HPKEASNIIE KILMSKKARE AAKKARELVL RKSSLEVGSL PGKLADCSSK DASECEIYIV EGDSAGGSAK QGRDRRFQAI LPLRGKILNV EKAGIGRALE NAEIRAMITA FGAGFGDEMD LEKLRYHKII IMTDADVDGA HIRTLMLTFF YRHLRELINE GHIYIAQPPL YKVQAGKQIQ YVYSDEQLQS VTKVMDQENK RYGIQRYKGL GEMNPEQLWE TTMDPEVRTL LKVSLEDATY ADKMFNVLMG DKVEPRRQFI EEHAQYVRNL DI
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