Gene Smon_1487 details

Gene Information

• Locus tag: Smon_1487
• ID: 8601239
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptobacillus moniliformis DSM 12112
• Kingdom: Bacteria
• Replicon accession: NC_013515
• Strand: -
• Start bp: 1644131
• End bp: 1649572
• Gene Length: 5442 bp
• Protein Length: 1813 aa
• Translation table: 11
• GC content: 30%
• Product: YadA domain protein
• Protein accession: YP_003306796
• Protein GI: 269124219

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA TTCAGGAGTT AAGAAGATTT TTAAAGAGTT CTTTAAAAAA CAAGGTAAGT 
GTAAATGAAA AAACAGTACT AAGGTATATG ATGTTAGGAT TTGTAGGATT ATCTACAATT 
TCTAACGGTG CTTGGCTAGC AATCAATGAA ACAAATGGGA CTGTAGGGAC TTCAACAAAT 
GGTAGTAGTC CTCAGGGAGA AAATAATACA AAAAATAATA TAATATTATC TAAATATGAT 
AGTTCATATA ATACAGACCA TTCAGTAGTA ATAGGAGCTG GAGGAAAGAC TTATGCTAAA 
AGAAAAGAAA ATGTAGTAAT AGGATACAAT GCACAATCAG AAAAACAACA AAGTGTAGTA 
ATAGGAGCTA ATACTAAATC AGATTTACAA AATTCGGTAG TTCTTGGAAA TAATTCATAT 
GTATATAAAA ATAATTTTAA TACAAATAAT GGTGTAACTG ATGATGATGG ACAAGGAGTT 
GCAGTAGGTA ACTCTGTATA TTCAACAGCC CAAGCAACAT CTTTAGGGAA TAATACATAT 
GCTATAGGAA GGTCATCTAT AGCAATAGGA AATGATGATG TTTCTTCATA TGTTCAACCT 
GTTACAGAAT ATGATTATAA AAATTATTTT AAAAATCTTT ATGATAAAAT AGACAATAAA 
GGAGATACAT ATGGATATGC AAATGGGAAA AAAGTACAAG GTAAAGAGGA AAATCACAAA 
TGGTCACCAA CACTAGCCCA AGGACATGGA TCAATAGCCA TAGGTTCTAG ATCAATAGCA 
TATGCAGATG GATCAACGGC ATTAGGAACA CTTGCTTATG CCCTAAAGAA TGGATCAACA 
GCAATAGGAA CACTAACAAG AGCAGAAGGA GAGGGAGCAA TAGCAATAGG AAGAGAAACT 
AATGTATTTT CAAATAATGC TATTTCTGCT GGTAATAAGA CACTTGTTTT AGAAGAGGGT 
GGAGCAGCAT ATGGATTACA AGCAGTTTCA GGAGGTAAAA ACTCTATAGC AATAGGAACA 
GATGTATATT CTAATGTAGA CTATGATTAT GATAGTAAAG TAATATTAGG TGGAAGTCAA 
AGATCTGGTG AATGGAGATT ATTTGGAGAT TTAGCTAATT ATGGTCAAGT AGGAAGTACA 
GAAGATAAAA GAGGTCTATA TGGATTTGAT TTAAATGGGG TTGCAAAAAC TATTTTAGGA 
ATTGCAGAAG ATCAACCTAG AGATAATATA CCAGATGCTA AAAAAGGAGA TTATTTAAAG 
AGTGGAGATT ATTTCTCATA CTATAAAAAC TATATAGATG GTATAGAAAA TGGATTAACT 
AATGCAAAGA CAAAAGACAC AAAGGAAACA ACAAATTCAA TAAGAATAAA AACACAAGAA 
AAAAAAGGAG TAAAAGATAT TGCCAAAGGT AATGGTAAAA ATGCAATAGT AATAGGAAGT 
AAATCGGGAG CATTTGGAGA TAATGCTATA GCACTAGGTA GAGGATCATT TTCACTTAAA 
GAAAATTCAA TATCAATAGG ATCATATTCA TATACAAAAG ATAAGAATGC TATTGCAATA 
GGAATAGCTT CAAGAGCTTT GGCAGAAGGA TCGGTTACAT TTGGTAATGG GGCAGGAGTA 
GATATATCAG GAAAGAATTC TATGGTATAT GGACATGGAT CAGTAGCCTA TGCCCCTAAT 
TCAATAATAC TAGGAATAAA TTCTCGTTTA TGGGATGAAA GTGATGCAGG AGATTCAATA 
ATAATAGGAA ATAATGCTAA TGTATATGGT TTAAATGGTA AAAAAGGTCA TAAAGGTAAG 
TCAGTACTTG CATTGGGGAA TGAAACTTTA GCCTCACTTG ATAATTCAGT AGCCTTAGGA 
TTTAAGTCAC AAACAGACTA TAACCAAGAA GATTTAGACA AACCAGGATA TACAGCAAGA 
GGGTCATATT CAATACCGAG TTCGGCAAAA GTAGGAGTAA TATCAGTAGG TAAAAAAGGA 
TATGAGAGAA GAATAATCAA TGTAGCAGCA GGATATAGAG ATTCAGATGC AGTAAATGTA 
GCTCAACTTA AAACACTAGA AGATAGATTA GATGGAGCGA CAGAAGAGGC AGATGATAAG 
GTAAGATATT TTTCCGTAAA TACAGAAAAT GATTTATCAG AAATAGCAAG AAAAAAGATA 
GATTACAAAA ATTATGTTAA ATTAAAAGTA CAAAAATTAA CAGTAGAAGC CAGAAAAAAG 
GCTGGAGATC AAATAAATGA AGAAAATGTT AAAGGATTAG AAGAAAAATT AAAAAAAATA 
GAAGATAAGG CTGGAATAAA GGATAAAGCT ACTTCAATTA ATGCTCTAGT AGACATGAAT 
AATCATAAAT ATATGAATAA TGGAACTTTT GATATTGATA AATATATGGA AGATTTGGAA 
AAAGCAAAAG AATCTGATTT ATCAGAAACT ACACTTAATA GTGTATTAAG TGATGAAGAA 
AAAACTAAAT TAAGTTCAAA TAATTATGAT AATAAAGGAG CAAAAGCTAA AGATTCAATA 
GCAATAGGTT ATGATGCTAG TACAGAAACA GGAGCAGAAA ATGCTATAGC TATAGGTATG 
GGAGCAAAAG CGACGAGTAA AGATAGTATA GTTTTAGGTA GTTATTCTAA GAATACAGCA 
ACTTTAACTA ATGCTGGATA TGATTTTGAA ACAAAAATGA CTTCTAATTT AACGGATTCA 
ACATGGAAGC CAACTAAAGG AGAACTTGCT ATAGGAGATG GTACAACTAA TACTAGAAGA 
ATAACAGGAG TAGCTGCAGG AGATAAAGAT ACAGATGCAG TAAATGTTGC TCAACTAAAA 
AAAGTTACAT CAGGATTATT AAATGACAAA GAATTACTTA CATTTATTGG TAATGATACA 
AGTAAAGAAG TAAAAGTTAA AATAGGAGAA AAACTTAATA TAGTAGGTGA AGGAACAGTT 
GCTAATGGAA CAGCTGCAAA TAATATAAAA GTAACAGCAG ATAGTAATAG TAAGAAATTA 
ACTATAGGAT TAGCAAAGAA TTTAGTAGAT TTAGAAAGTA TATCAGTTAA GAAAAATGGA 
AATGAAATTA AGATTAGCTC TGATAAAATA ACTGTATCAA AAAATGGAGA AAAGGTAGAG 
ATAACAAAAG ATTCTTTAAT GGGTGCAACA ACTGTTGGGA AAGATAAAGA TAACTCTATA 
ATGTTTGGTA GTGGTACAGA TGATAAAGCT ACAACTAAAT TAAAAGTTGC TGGTAAAGAA 
TTAACATTCA CTAAATCAGG AGATAATATT AAAATATCTA ATGTAGCAAA TGGAATAGAA 
GATAAAGATG CTGTAAATGT ATCACAACTT AAAAAATATG TAGAAGCTTT AGGTGGAAAT 
GCAAAAATTG ATGATAAAGG AAATGTTACA GGACCTAAAT ATAATTTAAA AGCTGGTGAT 
GAAAATGCTA AAGATTATAC TAATGTAGGA GAGGCTATAA AAGCTTTAGA TGATGCTATC 
AATAAATCTT CAGATAGCAT AAAAGATATT ACAAACAAAG AAATATCATT TTATGGAAAT 
GATGGAGAAG ATAAAAAAGT AAGTAAAAAA CTAGGACAAT CATTAGCAAT AAAAGGTGAG 
GGAACAGTTG CTAATGGAAC TGCAAAAGAT AATATTAAAG TTGAAAAAAG TGCTGACAGT 
AATGGACTAG ATATTAAACT TGCTGAAGAT TTAAAGAATC TGAAAAGTAT AGAAACTAAA 
AAAGATGGTA ACAAACAAAC TAAAATTACT ACAGATGGTG TAGAAGTTAC AAACGATAAA 
GGTAAAGCTA GTTTAACTGG TGATAAATTA ACATTTGGAG CAAAAGATGC TAATTCAGCT 
GATAAAACAA GTACAACTAT TGAAAAAAGT GGCGTAACTG TAAAAGGTAA AGATGGAAAA 
GATGCAGTAT CAATAAAATC TGGAGAAAAT GGTGGAACAA TAGTTGTAAA TGGTAAAGAT 
GGAAAAGATT CAATCAAAAT AGATGGTGAT AAAGGCACTA TAACAGGACT TAAAGATATA 
GCTCATAATG CATCTGGAGA TACAGTAGTT AATAAGAATT ATGTTGATAA CAAGATAAAA 
GAAATAGCTA ATGGACCATT TGAATATGAA ACAAAAGATA AAAAAGAAAA AGTTATCAGA 
GGACAAGATG GTAAGTTATA CAAAGAAGAG GATTTAAAGA AACACTATTA TGATGAAAAA 
ACGTCTTCAT ATAAGCCTAA AAATAGTGGT AGTTCAGAAC AATTAACAGC AGTAGATAGT 
AAAGATGTAA ATGTAAATCT AATGCCTAAG GGAGATGGGA AGAAACCAAT ATCAATAGGA 
AATGTAGAAG GTGTTTTAGG TGAAAATCCA ACAGATGAAA AAGTTAAAGA CCTACTATCT 
AATAAAAATG GTGTAGCTGA TAATAGTAAA AATAAGGTTG CAACAGGTTC AGATATATTA 
GCATTAGCAA AAGCAGGATT AAACTTTGCT GGTAATACTG GTGCAGGAGA TGAAATTCAC 
AGAAACCTAG GAGAAAAAGT AACTATTAAA GGTGAGGGAA CTGATAGTAA AAATGACTTT 
AATAGTGCAA GTGGAAACAT ACAGGTTAAA TCTGATAAAA TGGACGGTTC ATTAACAGTA 
AAACTATCAG ACAAACTAAC TAATATGACT TCATTTGAAA CAAAAGATTT AGATGATAAT 
GGAACTAAAT CTAAAGTTAA ACTAGATAAA GATGGTTTAA CTTCAATTAA GAAGACAGAT 
GATAATAAGT TCATTCAATC TAAAATAGGA GTAGATGGAA TTAATATAGG TAAATACGAT 
AATGAGCCAA ATAATAATTC ACAACCTACT GAAAGTGCAA AATACACAAT AGGTGGAACG 
ACAATAAAAG ATGGTAAAGG AGAATCTAAT TTAACATCTA CAACTTTAAG CTTTAAAGAT 
AATAACGGAA AAATAAAAGG ATTAGCAGAT CCAGTTGAAG AAAATGATGC AGTTAATAAG 
AGATATGTTG ATAATAAAAT AGGAATAGCT TTAAATGGAG TAGCAAATGC AGTAGCTATG 
GCAAATCTAC CACAAGTAAG TGCGATAGGA GATAAAAGAC ATAACATAGC AGGTTCATAT 
GGTTACTATA ACGGAGAGAA TGCTTTTGCT TTAGGATTAT CAGGAGTAAA TGAAACGGGA 
ACTTTAGTAT ATAGAGCAAG TGGAGCATTA AATACTAAAG GACATGTATC TTTAGGAGCA 
GGATTAGGGT ATCAATTTGA TAATATAGGT AAAAGAAGTA AAGAAATTTT AAAATTACAA 
AGAAATGGAA ACATTAATTT ACTTGATGAA AAAGTATATG AATTAAATAA TGAAGTTAAA 
GCTCTTAAAG AAGAGAATAA GGCTATTATC GAAAAAAATA TGAATTTAGA AAATAGAATT 
TCTGAATTAG AAAAATTAAT AAAAAAATTA ATTGAAAAAT AG 

 

Protein sequence

MNKIQELRRF LKSSLKNKVS VNEKTVLRYM MLGFVGLSTI SNGAWLAINE TNGTVGTSTN 
GSSPQGENNT KNNIILSKYD SSYNTDHSVV IGAGGKTYAK RKENVVIGYN AQSEKQQSVV 
IGANTKSDLQ NSVVLGNNSY VYKNNFNTNN GVTDDDGQGV AVGNSVYSTA QATSLGNNTY 
AIGRSSIAIG NDDVSSYVQP VTEYDYKNYF KNLYDKIDNK GDTYGYANGK KVQGKEENHK 
WSPTLAQGHG SIAIGSRSIA YADGSTALGT LAYALKNGST AIGTLTRAEG EGAIAIGRET 
NVFSNNAISA GNKTLVLEEG GAAYGLQAVS GGKNSIAIGT DVYSNVDYDY DSKVILGGSQ 
RSGEWRLFGD LANYGQVGST EDKRGLYGFD LNGVAKTILG IAEDQPRDNI PDAKKGDYLK 
SGDYFSYYKN YIDGIENGLT NAKTKDTKET TNSIRIKTQE KKGVKDIAKG NGKNAIVIGS 
KSGAFGDNAI ALGRGSFSLK ENSISIGSYS YTKDKNAIAI GIASRALAEG SVTFGNGAGV 
DISGKNSMVY GHGSVAYAPN SIILGINSRL WDESDAGDSI IIGNNANVYG LNGKKGHKGK 
SVLALGNETL ASLDNSVALG FKSQTDYNQE DLDKPGYTAR GSYSIPSSAK VGVISVGKKG 
YERRIINVAA GYRDSDAVNV AQLKTLEDRL DGATEEADDK VRYFSVNTEN DLSEIARKKI 
DYKNYVKLKV QKLTVEARKK AGDQINEENV KGLEEKLKKI EDKAGIKDKA TSINALVDMN 
NHKYMNNGTF DIDKYMEDLE KAKESDLSET TLNSVLSDEE KTKLSSNNYD NKGAKAKDSI 
AIGYDASTET GAENAIAIGM GAKATSKDSI VLGSYSKNTA TLTNAGYDFE TKMTSNLTDS 
TWKPTKGELA IGDGTTNTRR ITGVAAGDKD TDAVNVAQLK KVTSGLLNDK ELLTFIGNDT 
SKEVKVKIGE KLNIVGEGTV ANGTAANNIK VTADSNSKKL TIGLAKNLVD LESISVKKNG 
NEIKISSDKI TVSKNGEKVE ITKDSLMGAT TVGKDKDNSI MFGSGTDDKA TTKLKVAGKE 
LTFTKSGDNI KISNVANGIE DKDAVNVSQL KKYVEALGGN AKIDDKGNVT GPKYNLKAGD 
ENAKDYTNVG EAIKALDDAI NKSSDSIKDI TNKEISFYGN DGEDKKVSKK LGQSLAIKGE 
GTVANGTAKD NIKVEKSADS NGLDIKLAED LKNLKSIETK KDGNKQTKIT TDGVEVTNDK 
GKASLTGDKL TFGAKDANSA DKTSTTIEKS GVTVKGKDGK DAVSIKSGEN GGTIVVNGKD 
GKDSIKIDGD KGTITGLKDI AHNASGDTVV NKNYVDNKIK EIANGPFEYE TKDKKEKVIR 
GQDGKLYKEE DLKKHYYDEK TSSYKPKNSG SSEQLTAVDS KDVNVNLMPK GDGKKPISIG 
NVEGVLGENP TDEKVKDLLS NKNGVADNSK NKVATGSDIL ALAKAGLNFA GNTGAGDEIH 
RNLGEKVTIK GEGTDSKNDF NSASGNIQVK SDKMDGSLTV KLSDKLTNMT SFETKDLDDN 
GTKSKVKLDK DGLTSIKKTD DNKFIQSKIG VDGINIGKYD NEPNNNSQPT ESAKYTIGGT 
TIKDGKGESN LTSTTLSFKD NNGKIKGLAD PVEENDAVNK RYVDNKIGIA LNGVANAVAM 
ANLPQVSAIG DKRHNIAGSY GYYNGENAFA LGLSGVNETG TLVYRASGAL NTKGHVSLGA 
GLGYQFDNIG KRSKEILKLQ RNGNINLLDE KVYELNNEVK ALKEENKAII EKNMNLENRI 
SELEKLIKKL IEK