Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smon_1483 |
Symbol | |
ID | 8601235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptobacillus moniliformis DSM 12112 |
Kingdom | Bacteria |
Replicon accession | NC_013515 |
Strand | - |
Start bp | 1633582 |
End bp | 1637583 |
Gene Length | 4002 bp |
Protein Length | 1333 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | YadA domain protein |
Protein accession | YP_003306793 |
Protein GI | 269124216 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAA ATTTTAAAAT AGAAGGTGAA TTGAAGAAAC GGCTTAAAAG AAAAATAAAT ATTAGTAAAG GACTTATTAT TGCTTTTTTA ATAACAGGAA GCTTTTTAAG TAATATATCT TATTCAGAGG ATTATGAAAA AGATCCAACA GAAAATCAAC AAGGCGTAGA TGGAACAGAT GGATTTACTC GTGGAAATTC AGCCAAAATA GAATATGATC CTAAAGGTGT ACCCAAAATA TTGGATAATA AAGTACCAGG GAATACATTA GATACTACAA AAAAAAGAGG GACAGGAGTA GCCCTAGGAG CATTCTCTTA TGCAGGACAG GGTGGAGTAG CTTTAGGGAG TCATTCATCA AGTAAAGGGG CAGTATTTGG TGTAGGTATA GGTTTTCAAG CAAGGGCAAC AAAAGCATCA GCTATAGCAA TAGGAGCAGG AAGTTATGCT GAAGGGTATT ATTCACAGGC ATATGGAAGA AGTGCAACAG CATTAGGAAA TGAATCTATA GCACAAGGGG TAACAGCATT AGCAAAAGAA AAAGGTTCAA TAGCTATAGG AACAAATGCA ACATCAAGTG GAGAAAATGC AATAGCGATA GGATCATCGG CAAGAGAAAG AAATGCACTG TATCAAACAG ATTCCAAAAA GAGAGTAGAT GCATCAGGAA AGAATTCAGT AGCTTTAGGT CATATAGCAC AAGCTTCTGG AGAAAATGCA CTATCTTTTG GATACAAGGC TGAATCAACA ATGATGGGAG CAATAGCTTT AGGAAGTGAA TCAAAGACAA CTGTAGATAA AGGAGTAATG GGATATGTAC CAAGTGCTGA TAAAACTCTT TCAGGAAATG CATGGCAATC AACTCATGCA GCATTAGCAA TAGGTAATGG AAGTACAGTT ACAAGACAAA TAACGGGACT AGCAGCAGGA AAAGAAGATA CAGATGCAGT AAATGTGGCT CAATTAAAAG CTTTGGCAAC AAAACTAGAA GATGATAAAA AAACATATTT TCATGTTAAT ACAGGCACTC ACAATGGTGG AAATAAAAGT AGTAATTTAG GTAAAATTGG AGAGGCAGCT GGAGCAGAAG GAAAATATTC TATAACAGCT GGAATGAATG CTAATGCAAA AGAAGAGGCA TCTATTGCAA TAGGATATAA TTCTAAGAGT TTAAAAAAGC ATACAATAGC AGTAGGAATG CATGCTAATT CTGAAGGAGA AGCCTCTATT TCTATAGGAT ATGGTGCTAA GACTTCAAAT AATTATTCAA TATCACTTGG TAGATATGCA GAATCAAAAG GAACAGATTC ATTATCTATA GGATCTGAAA GTGTTGCAGA AAAAAACTCA GCTATAGCAA TAGGAAGAAA AGCTAAGTCA AAAGAGGATA ATTCTATTTC TATTGGTCAA AGTTCTCAAA GTTTTAAAAG TAATTCTATA ACATTTGGAA CATCTGCTAT GACAAATGGA GAAAGTAGTA TAGCTGTGGG AACGAATTCT AAATCAGAAG GAGCACATGC AATAGCTATA GGAAAAGAAA GTAGATCAGA AAAATTAGAT GCTTTATCAA TAGGGCATCA AGCTGTTACA ACAGCAGAAA GAACGATTGC ATTAGGATCA TATTCAAAGG CAACAAAAGA TTACGGTATA GCTATTGGTT TATGGTCAGA AGCAGCAGCA ATGAATGCTA TAGCTATAGG TGGAAATGCT ATGTCTAAAG CATCTGGTTC TATTGCAATA GGAGTTAGTT CAAAAGTGGA AGAAGATGCA ATAAATGGTA TTGCTATAGG TAAAAGTTCA AAAAGTTCAA AAGAACATAG TATAGCTATT GGAACAAATA CTGAGGCAAA AGATGATGGA GCAATAGCTT TAGGAGATAA TGCAAAAGCA GTTAAAAATG CTATTTCTAT AGGTAAAGAA AGTAAATCTT CAGATGAAAA TTCTATAGCA TTTGGATATA ATAGTGAAGC AAAAGGAAAA CATTCAATAT CTATAGGAGC TTATGCAGTA TCAGAAAATA CTAATGATAT ATCTTTAGGA TTATACGCAA AAGCAAAAGG TGGAAAATCT ATAGCAATAG GACAAAGTTC AGAAGCCTTA AAATCAGACT CTATAGCAAT AGGAAGACAT TCAAAAGTTA CTGTAGATGA ATCTGTAGCT ATTGGATCAG AAAGTGAAAC AAAAACACCT GTGGCATCTT TAAATGTTAC AATAGAAAAT TTAAAATATG GAAACTTTGC AGCACCAAAC GTTTCTCATG TAGTGGCTAT AGGATCTAAA AATAAGGAAA GACAATTACA GTATGTTGGA GCAGGGCAAG TAAGTAAAGA CTCAACAGAT GCAATTAATG GATCACAACT ATTTGCAACT AATAATATTT TAGGTAAATT TGCGAATAAA ACAAAGAGTA TTTTTGGTGG AAATGCAAAT TTAGCAGAAA ATGGAGAGCT TACTTTTACA AATATAGGTG GAACAAATAA AGATACAATT CATGAGGCAA TAAAATCATT AGATGATAAA ATAACAAAAT CAATAGCTGA ATATGGATTT AATGTAATGG CAGGAAAAGA AGGAACAGGA ACTTCATCTG GAGAAAATAA AACAAAACTA TTAAAAGATG AATTACTAAC ATTAAAAGCT GGAGATAATT TAAGTATTAC ACAAGCTGGA AAAGATTTTA CATATGCATT AAGTAAAACA TTAAAAGATT TAACTAGTGC AGAATTTAAT GGCACTTCTG GAGGTAAAGT TAAGATTACT GGAGATGAAA TATCTATAAA TAATGGTAGT GATAAAGTAA AAATAACTAA AGATGGATTA GATAACGGGG GTAAAGTTTT AAAAAATATT GGTGATGGAA AAAATGACAC TGATGCAGTA AATAAGAAAC AATTAGATGA AGTTGAGAAA AAAATAGACA CTTCTAAAAA AGAATTAGAG AATAAAATAG ATGAAAGTAA GAAAGAAATA GAAAAAAATA AGAAAGAAAT AGAAAATAAA ATAGATGAGA CTAAGAAAGA ATTAGAGAAA AAGATAGAGG ATAATAAAAA AGAAGTAGAT AAAAAGATAG ATGAAACTAA GAAAGAGTTA GAAGAAAAAA TAACAAAAAA TGATGAAAAA ATAGAAAGCA CTAAAAAGGA TTTAACAGAT AAGATAGACA AAGCAACAAA GACGCTAAAG ACAGATATAA CAGCAAATTC TGGAGAGGAA GCAAATAAGA CTAAAGGTCC AGTAACTTTA ACATCTAAAA AATCAAATGA AGGACATAAT ATTTATGATA TTAGTTTATC TACAACACAA TTAAAATCAA GTTCTGGTGG AAAAGTAGAA AAATTAAGTG ATGAAGATTC TAAAAAGGTA GCAAATGCAG GAGAAGTATC AAAAGCAATA AATGCCTTAG GAAATAATAG TATATCATTT GGTGGAGATA GTGGAGAAAC AGATAAACAA TCATTAAATA AAGATGGAGG ATTAAATTTT AAAATTAGTG GTTCAGGATA TATAAAAACA GAAGCTAAAG GAAATGAAGT TAAGGTAGAT TTAACAGATA AGGCGAAAAA AGATATAGAA AAAGGAATAG CAGCAAATAG TGGAGTAGCA AATGCAATAG CAATGGCAAA TTTACCACAG ATGAGTGGTA TTGGACATAA CCTGTCAGGT TCATATGGAT ACTACAATGG AGAACATGCA TTTGCAATAG GATTATCAGG AATGAATGAT AGAGCTAATT TAGTATATAG AGCAAGTGGA TCATTAAATA CTAGAGGACA TATATCACTA GGTGCAGGAC TTGGATATCA ATTTGAGAGT GTAGGAAATA GAAATAAAGA GATGTTAAAA TTACAAAGAA ATGGAAACAT TAATCTACTT GATGAAAAAG TTTATGAATT AGATAAAGAA TTCAAAGTTC TTGAAGAAAA AGTTAAAGTT CTTGAAGAAA ATAATAAAAC TTTAGAAAAT AGAATTAATG AATTAGAAAG ATTAATGCAA AAAAATAAGT AG
|
Protein sequence | MIKNFKIEGE LKKRLKRKIN ISKGLIIAFL ITGSFLSNIS YSEDYEKDPT ENQQGVDGTD GFTRGNSAKI EYDPKGVPKI LDNKVPGNTL DTTKKRGTGV ALGAFSYAGQ GGVALGSHSS SKGAVFGVGI GFQARATKAS AIAIGAGSYA EGYYSQAYGR SATALGNESI AQGVTALAKE KGSIAIGTNA TSSGENAIAI GSSARERNAL YQTDSKKRVD ASGKNSVALG HIAQASGENA LSFGYKAEST MMGAIALGSE SKTTVDKGVM GYVPSADKTL SGNAWQSTHA ALAIGNGSTV TRQITGLAAG KEDTDAVNVA QLKALATKLE DDKKTYFHVN TGTHNGGNKS SNLGKIGEAA GAEGKYSITA GMNANAKEEA SIAIGYNSKS LKKHTIAVGM HANSEGEASI SIGYGAKTSN NYSISLGRYA ESKGTDSLSI GSESVAEKNS AIAIGRKAKS KEDNSISIGQ SSQSFKSNSI TFGTSAMTNG ESSIAVGTNS KSEGAHAIAI GKESRSEKLD ALSIGHQAVT TAERTIALGS YSKATKDYGI AIGLWSEAAA MNAIAIGGNA MSKASGSIAI GVSSKVEEDA INGIAIGKSS KSSKEHSIAI GTNTEAKDDG AIALGDNAKA VKNAISIGKE SKSSDENSIA FGYNSEAKGK HSISIGAYAV SENTNDISLG LYAKAKGGKS IAIGQSSEAL KSDSIAIGRH SKVTVDESVA IGSESETKTP VASLNVTIEN LKYGNFAAPN VSHVVAIGSK NKERQLQYVG AGQVSKDSTD AINGSQLFAT NNILGKFANK TKSIFGGNAN LAENGELTFT NIGGTNKDTI HEAIKSLDDK ITKSIAEYGF NVMAGKEGTG TSSGENKTKL LKDELLTLKA GDNLSITQAG KDFTYALSKT LKDLTSAEFN GTSGGKVKIT GDEISINNGS DKVKITKDGL DNGGKVLKNI GDGKNDTDAV NKKQLDEVEK KIDTSKKELE NKIDESKKEI EKNKKEIENK IDETKKELEK KIEDNKKEVD KKIDETKKEL EEKITKNDEK IESTKKDLTD KIDKATKTLK TDITANSGEE ANKTKGPVTL TSKKSNEGHN IYDISLSTTQ LKSSSGGKVE KLSDEDSKKV ANAGEVSKAI NALGNNSISF GGDSGETDKQ SLNKDGGLNF KISGSGYIKT EAKGNEVKVD LTDKAKKDIE KGIAANSGVA NAIAMANLPQ MSGIGHNLSG SYGYYNGEHA FAIGLSGMND RANLVYRASG SLNTRGHISL GAGLGYQFES VGNRNKEMLK LQRNGNINLL DEKVYELDKE FKVLEEKVKV LEENNKTLEN RINELERLMQ KNK
|
| |