| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smon_0884 |
|---|
| Symbol | |
|---|
| ID | 8600608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptobacillus moniliformis DSM 12112 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013515 |
|---|
| Strand | - |
|---|
| Start bp | 973927 |
|---|
| End bp | 976458 |
|---|
| Gene Length | 2532 bp |
|---|
| Protein Length | 843 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | |
|---|
| Product | CagE TrbE VirB component of type IV transporter system |
|---|
| Protein accession | YP_003306228 |
|---|
| Protein GI | 269123651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAC AGATATTAAA TGACTATAAA AAATCATATA AATTTTTTAT TCATTTTGAA
ACTATGATTG AAGATGGAAT AATATTAAAT AAAAATAATG GTTTTCAATC TACATTTAAA
GTAAGATTTT ATGATTTAGA TTATTTAAGT ACAGATGATA TAACAACAAT AAATGATAGA
TTAAATAATG CTTATAAAAG ATTACCAGAT GGATTTTCAA TACATTTTGA AGTACAGAGA
AATAAAAGTG ATAAATATCC AACTAAAGAT TTAAAAAATA AGCCTTACCC TACAAGGATA
ATAGATAAAA TGAGAGAAAA TTCTGTAACT AAAGAAACAT TTTATTCAAC AGAATACTTT
GTTACTCTTA CATATATAAT GCAAAATGAT AGTAATGAAA AAATAAATTT ATTATTAAAT
AAATTTACAA GTATATTTTC AAAAAATAAA GAAAAAGAAA ATACTAAAGA TGAATTAATT
AAGATATTTA AAAATGAACT AAAAGAATAC AAAGATCAAA TATTAATGTT TATTGAACAA
GTTAAAACTG CTGCAATTGA TGTTGAAATG TTAAAAGGAG AAGAGCTATT AGCTTTTCTA
TACACTGCAA TAAATATGGA AAAAAGAGAA AAAGTAAAAG TTCCCAAAGA TAATATTATG
TTGCTTGATG AATACTTAAC TGTATCAACT TTAACAAATG GAGAATATAC TAAAATAAAT
GATGAATATG TTAAAGTAGT TACAATTAAT ATGTTTCCAG ATAATGTAAC TCAAAGAATA
TTTAATCAAC TTGAGAGTTT AAATTTTGAA TATAGATATG TAACTAGATT TATTATGTTA
AGTAGAGAAG AAACAATTAA AATTTTAAAA GATTTTAAAG TATATTTTTC TGCTAAAGTA
AAATCTTTTG CACAGTGGTT AATAGAAATT AAAAATGGGC AAGAAGTTCA AAATATAGAT
TATACAGCAC TTGATAAGGT TGACGAGGCA GATTTAGCAT TAAATGAAGC TAAAACTGGA
GCATTAGCTT ACGGATATTA TACATTTTCA TTTATTATTA AAGATAAAAA TTTAGAAAAT
TTAGATAAAA AAGTTAATGA TGTTAGAAAA ATACTTAATT TCTATGATTT TGTAGCTGGA
GAAGATAAAT ACAATACACT AGATTCTATT TTTGGAGCTT TACCTGGTAA TATTGTAAAT
AATGTTAGAA AATCGCCTAT GAATACTTAT TTATTGTCAG CATTATTACC TATGTCCTCT
TTATATGTAG GAAATAAGGT AAATAAACAC TTAAAAGATA TTGCCTTATT TACTACTAAA
ACTGATAAGG AACTATTTTA TTTTAACCTT CACAATAAAG ATATTGGACA TAGTTTGGTT
ATAGGACCTA CTGGTGCTGG TAAATCATTC TTACTTAGTA TGATAGCAGC TAATTTCTTA
AAATATGAAG GAAAAATATT AGATAAAGAA GGAAAAGAAA AAATAAAACC ATCTCAAGTA
TTTTTCTTTG ATAAAGATGC TTCAAGTAGA GTACTTACAT ATACATCTGG TGGAAAATTC
TATGATTTAG GAGAAAAAGA AATAGCTTTT CAACCATTAA AGAATATACA TATAAATAGT
GAGAAGGAGT GGGCTTTAGG TTGGATTATT GGAATACTTG AGCAAGAAGG AATCCCTTAT
GATGCTACTA CTAAAAATAT AGTGGAACAA TCTATAGAAT CACTTACAAC TGCAAAAATT
GAAAGTAGAA CATTATCAAA TTTAAGAACA TATATTGCAT CTCGTTCAAA AACTGTAGCA
CAAGCACTAG ATTCATATTG TGGAGAAAAT GTTTATGGAG AATATTTTGA TAATAATTTT
GATAATATTA CTGATAATAA TTTTATTACA TTTGAAATGG GTAATGTAAT TTCTAATCCA
AAAGTTGTAG CACCATTATT AGATTATATA TTTCATAAAA TAGAAAGAGA AAAATTAGAT
GGAACACCTA CACTTATCTT ACTTGATGAA TGTTGGCTTT TCTTAAAAAA TGAAAAAATG
AGAGAAAAAA TTAATGAATG GCTTAAAGTA TTAAGAAAGA AAAATACATC AGTTGTATTT
GCGACACAAT CTTTATCAGA CATTGCTGAT TCTCCTATAT TCTCAACTAT AATTGATGCT
TGTAAAACAA ATATTTTCTT ACCTAATGAA AGAGCTATGA GTGCTTGGGT AGATTTATAT
AAGAGATTTA ACTTAACAGA AAAAGAGATA AAAGAGATAA ATGATGGGAC AATGAAACAA
GATTACTTTG TTAAGACTAC AGAAGGTGCA AGATTATTTC AGTTAAATCC TTCAGATATT
GAAATAGCTT ATTTGGGTTC TTCAACAAGT AATGATCAAA ATATTATAAT TAATTTAAAA
AATAAGATTG ATGATGAAAT ATTATCTAAT AATGAAAAAA TTAAAAAATT AAATAGAGAA
TGGTTAAGTT ATAAATACAA AATAGGAGAG ATAAGTATAA ATAATATAAA TCAAATAAAA
GATATTTTAT AA
|
|---|
| Protein sequence | MLKQILNDYK KSYKFFIHFE TMIEDGIILN KNNGFQSTFK VRFYDLDYLS TDDITTINDR
LNNAYKRLPD GFSIHFEVQR NKSDKYPTKD LKNKPYPTRI IDKMRENSVT KETFYSTEYF
VTLTYIMQND SNEKINLLLN KFTSIFSKNK EKENTKDELI KIFKNELKEY KDQILMFIEQ
VKTAAIDVEM LKGEELLAFL YTAINMEKRE KVKVPKDNIM LLDEYLTVST LTNGEYTKIN
DEYVKVVTIN MFPDNVTQRI FNQLESLNFE YRYVTRFIML SREETIKILK DFKVYFSAKV
KSFAQWLIEI KNGQEVQNID YTALDKVDEA DLALNEAKTG ALAYGYYTFS FIIKDKNLEN
LDKKVNDVRK ILNFYDFVAG EDKYNTLDSI FGALPGNIVN NVRKSPMNTY LLSALLPMSS
LYVGNKVNKH LKDIALFTTK TDKELFYFNL HNKDIGHSLV IGPTGAGKSF LLSMIAANFL
KYEGKILDKE GKEKIKPSQV FFFDKDASSR VLTYTSGGKF YDLGEKEIAF QPLKNIHINS
EKEWALGWII GILEQEGIPY DATTKNIVEQ SIESLTTAKI ESRTLSNLRT YIASRSKTVA
QALDSYCGEN VYGEYFDNNF DNITDNNFIT FEMGNVISNP KVVAPLLDYI FHKIEREKLD
GTPTLILLDE CWLFLKNEKM REKINEWLKV LRKKNTSVVF ATQSLSDIAD SPIFSTIIDA
CKTNIFLPNE RAMSAWVDLY KRFNLTEKEI KEINDGTMKQ DYFVKTTEGA RLFQLNPSDI
EIAYLGSSTS NDQNIIINLK NKIDDEILSN NEKIKKLNRE WLSYKYKIGE ISINNINQIK
DIL
|
|---|
| |