| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smon_0486 |
|---|
| Symbol | |
|---|
| ID | 8600204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptobacillus moniliformis DSM 12112 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013515 |
|---|
| Strand | + |
|---|
| Start bp | 567344 |
|---|
| End bp | 568483 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
|---|
| Protein accession | YP_003305843 |
|---|
| Protein GI | 269123266 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCTA AAAATATAGA TTTAAAGGAA AGTTTATCTA ATTTAATTAA AATAGCGAAA
GAAGAGAAAA TTATTAGTAG AGAAGAAATT AATAAATTGA TGAAAAATAA TTTTTCTCAA
GATAAAATAG AAGCTACATT TTTTAAGTTG CAAGAATTAA ATGTAGAAAT TGTAAATAAA
ATAGCCGACA AAAATAAATC TAAAAAAGAA ATAGAAAGAA ACAAAAAAGA AGAATTAGAA
ATAAATATTG ATGAAAAAGA AGTAGAAGCC CTATTAAACG AAGATTTAAC AACTGTTAGT
GAATCATCAG ATGTTGATGA ACCAATTAAA ATGTATTTAA GAGAAATAGG ACAAATACCT
TTACTTAAAA GTGAAGAAGA ATTTGAACTA GCAAGACGTA TAGGCGAAGG TGATGAAAGA
GCCAAACAAC AATTAATGGA ATCTAATTTA AGATTAGTTG TAAGTATTGC TAAAAAACAT
ACAAATAGAG GGTTAAAATT ACTTGATTTA ATTCAAGAAG GTAACATAGG ATTAATGAAG
GCAGTTGAGA AATTTGAATC AGATAAAGGA TTTAAGTTTT CAACATATGC TACATGGTGG
ATAAGACAGG CTATAACAAG AGCTATAGCT GATCAAGGTA GAACTATAAG AATACCTGTG
CATATGATAG AAACTATAAA TAAGATAAAA AAAGCATCAA GGATTCATTT ACAAGAAACA
GGGAAAGAAC CTACTGATGA TTATTTAGCT GAAATAGTTG AAATGCCAGT AGAAAAAGTT
AAAAATATTT TAGAGATGAA TCAAGACCCA ATATCATTAG AAACTCCAGT AGGAAGTGAA
GATGATTCAG AATTAGGAGA TTTTGTTGAA GATGATAAGT TCTTAAATCC TCACGAAGCC
ACAGTTAGAT CCGTATTAAA AGAAAAATTA AATGATGTAC TTAGAAAAGA ACTTAATGAA
AGAGAAGAGC AAGTACTAAG ATTAAGATAC GGACTTGATG ATGGTGCTCC TAAAACTTTA
GAAGAAGTTG GGAAAATATT TGATGTAACA AGAGAAAGAA TACGTCAAAT AGAAGTTAAG
GCTATAAATA AATTGAAAAA TATTAAAAAG AAAAAAGGTT TAGAAGATTT TAGAAACTAG
|
|---|
| Protein sequence | MAAKNIDLKE SLSNLIKIAK EEKIISREEI NKLMKNNFSQ DKIEATFFKL QELNVEIVNK
IADKNKSKKE IERNKKEELE INIDEKEVEA LLNEDLTTVS ESSDVDEPIK MYLREIGQIP
LLKSEEEFEL ARRIGEGDER AKQQLMESNL RLVVSIAKKH TNRGLKLLDL IQEGNIGLMK
AVEKFESDKG FKFSTYATWW IRQAITRAIA DQGRTIRIPV HMIETINKIK KASRIHLQET
GKEPTDDYLA EIVEMPVEKV KNILEMNQDP ISLETPVGSE DDSELGDFVE DDKFLNPHEA
TVRSVLKEKL NDVLRKELNE REEQVLRLRY GLDDGAPKTL EEVGKIFDVT RERIRQIEVK
AINKLKNIKK KKGLEDFRN
|
|---|
| |