Gene Smon_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmon_0482 
Symbol 
ID8600200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptobacillus moniliformis DSM 12112 
KingdomBacteria 
Replicon accessionNC_013515 
Strand
Start bp560738 
End bp564709 
Gene Length3972 bp 
Protein Length1323 aa 
Translation table11 
GC content29% 
IMG OID 
ProductDNA-directed RNA polymerase, beta' subunit 
Protein accessionYP_003305839 
Protein GI269123262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAA GAGATTTTGA TAGTATTCAA ATTAAACTTG CTTCACCTGA GAAAATATTA 
GAATGGTCTT ATGGAGAAGT AACTAAATCA GAAACTATAA ACTATAGAAC ATTAAAACCA
GAACTAGATG GTCTTTTTTG TGAAAGAATA TTTGGACCAA CAAAAGATTA TGAATGTACT
TGTGGTAAAC ATAAGAAAAT GAAAGATAAA GGAACTGTAT GTGAAAAATG TAAGGTTACT
ATTACAACTT CTAAAGTTAG AAGAGAGAGA ATGGGACATA TTAAACTTGC AACTCCTATA
GCTCATATTT GGTATTCTAA AGGAACTCCA AATAAAATGA GTTTACTTTT AGGTATAAGT
ACTAAAGAAT TAGAAGCAGT CTTATATTTC TCAAGATATA TAGTTATAGA TGGTGGAAAT
ACTGAGTTTA ATAAAAATCA AATTATTAGA GAACAACAGT ACAGATTATG TATGGAAAGA
AATGATCGTG GATCATTCCG TGCTAAAATG GGAGCTGAAG GTATTTTAGA ATTATTACAA
GAATTAGAAT TACCAGTTTT AGAAAAAGAA TTAGAAACAG ATATAGATAA AGAAAATTCA
AGTCAAAAAA GAAAGAAAAT GGTAAAAAGA TTAAAAATAG TTAGAGATTT TATTAGTTCT
GGGAATAAGC CTGAATGGTT AATTTTAACT ATATTACCTG TTATACCAGC AGATCTAAGA
CCATTAGTAC AACTTGATGG TGGAAGATTT GCAACTAGTG ATTTAAATGA TCTATATAGA
AGAGTAATAA ATAGAAATAT TAGATTACAG AAACTAATTG ATTCTAATGC TCCAGAAATC
ATGATAAGAA ATGAAAAAAG AATGCTTCAA GAAGCAGTAG ATGCTTTAAT AGATAATGGT
AGACGTGGTA AACCAGTTGT TACTCAATCT AATAGAGAAC TTAAATCATT ATCAAATATG
TTAAAAGGTA AACAAGGAAG ATTTAGACAA AACCTACTTG GAAAACGTGT GGATTATTCA
GGACGTTCAG TTATAGTTGT AGGTCCAAAT TTAAAAATTC ATCAATGTGG ATTACCTAAA
AAAATGGCAT TAGAACTATA TAAACCATTT TTAATGAGAG AATTAGTTAA AAGAGGAATA
TCTAGCAATG TTAAAACTGC TAAGAAAATG GTAGAAGAGG AAAATGAAGC AGTTTGGGAA
TTAATAGAAG AAATCATTAA AAATCATCCA GTATTGCTTA ACCGTGCCCC AACTCTACAT
AGATTATCAA TACAAGCTTT TGAACCAACA TTAATTGAAG GAAAAGCTAT TAGACTTCAT
CCATTAGTAT GTTCAGCATT TAATGCCGAT TTTGATGGGG ATCAAATGGC AGTTCATTTA
GTTCTATCAC CAGAGGCACA GCTTGAAGCT AAGTTATTGA TGCTTGCAAC TAATAATATT
ATTGCTCCAT CAAGTGGTAA ACCTATAGCA GTTCCATCTC AAGATATGGT TATGGGATGC
TATTATATGA CTAAGGAAAG ATTAGGAGAA ATAGGAGAAA ATAAATATTT TTCTAGCATA
GCTCAATTAA CTACAGCATA CCAAAATGAA AAAGTTGGAG TTCATGCATT AGTTAATGTA
AGAATAAATG GAAATATTGT TAAAACTACA CCTGGTAGAA TATTATTTAA CCAATTATTA
CCAGAAGAAA TTAGAAATTA TGAAGTTACT TTTGGTAAAG GTGAATTAGG TAAATTAATA
GCAGGACTAT ATGAACAATA TGGATTTGAA AAAACTTGTG AATTAATAGA TAAAATTAAA
GAATTTGGAT ATCACTTTGC TACATTTGCT GGGGTAAGTG TTGGTATAGA AGATTTACAA
ATTCCAGTTG AGAAAAAAGC TATACTTGCT AAAGCAGATA AGGATGTATT AGATATTGAA
AATGCATATA AAGCAGGTGA AATTATTAAT GATGAAAGAT ATAGAAGAAC AGTACAAGTA
TGGAATAAAG CTACTAATGA TGTAACTAAA GCCATGATGG ATAGTTTAGA TCAATTTAAT
CCAGTATATA TGATGGCAAA TTCTGGAGCC AGAGGATCTA TTGCACAAAT TCGTCAATTA
GGTGGAATGC GTGGAATGAT GTCAAATACT AAAGGGGAAA TTATAGAAAT ACCAATTAAA
GCTAACTTTA GAGAAGGATT AAACGTATTA GAGTTCTTTA TGTCATCACA TGGTGCTAGA
AAAGGATTAG CAGATACAGC CTTAAGAACA GCTGATTCAG GATACTTAAC AAGAAGACTT
GTAGATGTTT CACATGAATT AATAGTTAAT AAGGATGACT GTGGTTCTAA AAATCATGGA
ATAGAAGTAA GTGATTTAAC TTATGAAGGT AAAATTATAG AAAAATTAGA AGAAAGAATA
TATGGAAGAT TCTTAGCTGA AGATTTAGTA GATAATGGAA AAGTAATAGC TAAAGCTAAT
ACTTTAATTA CTAAAGATTT ATTAGCTGAA ATAGTTAAGA GAAACATAAG TAGTGTTAAG
ATGAGATCAC CATTAACATG TAAACTTGAT AAAGGTGTAT GTAAAAAATG TTATGGAATA
GATTTATCTA ACCACAAAGA AGTATTACTT GGAGAAGCAG TAGGAGTTAT TGCAGCTCAA
TCAATAGGAG AACCTGGAAC ACAGCTTACA ATGCGTACTT TCCATACAGG AGGGGTAGCT
ACAGGTTCTG AAGTTCAATC TGATCATAGA GCAGATGAAG ACGGAAAAAT TAAATATGAA
AATATTGAAA CATTTACTTA TCCAGATGGA AGAGAAATAG TTGTTTCATC AATAGGTAAA
GTAATTTTAG GTAAATATCG TTATGAAGTA CCTTCAGGTT CAGTATTAAA AGTTAAAAAT
AATGAAAAAG TTAAAAAAGG ACAAGTATTA ATAGAATTTG ATCCTTTCCA AACTCCAACT
ATTTCAACAG TAGCAGGTCG TATTGAATTT AGAGATATAT ATATTAAAGA AAATATAGAT
GTTAAATATG ATGTTGTTGA AAGACTGGCG ATTAAACCTA TAGAAAGTAC TCAAGTTAAA
CCAAGAGTTA TAGTATATGA TGATAAAGGT AAGAAAATAA AGGAATATCA TATTAATTAT
GGGTCTTATT TATTATTTAA AGAAGGAGAA ATGATTAAAC CAGGAGATAT AATTTCTAAA
TTACCTAAAA TTGGTGGAGG AAATAAAGAT ATTACTGGAG GTCTTCCAAG AGTTCAAGAG
TTATTTGAAG CAAGAAACTT AAAAGGTAAG GCTATACTTG CTAATGTTGG AGGAAGAATT
AAATTCTCTG ATAAAACTAA AAAAGGTATG AGAGTAGTTG AAATTCATGA TATAGATAAA
GATACTGTGA TAGAAGAATA TTCAATACCT GCTGGAGAAC ATTTAGTAGT TTCAAATGAA
ATGATAATAA ATGCTGGAGA TAAATTAACT GAAGGGCCTA TATCACCTCA TGATATATTA
AGAATAAAAG GAGCTGTTGA AGCACAACAA TTTATACTTG AATCAGTACA AGAAGTATAT
AGAAGCCAAG GTGTTACTGT TAATGATAAG CATATAGAAA TAATAGTTAA ACAAATGTTC
CAAAAAATTA GAATTAAAGA ATCAGGAGAT TCATTATTCT TAGAAGATGA ATTAGTTGAT
AAAAAAGCAA TAGAAAGAGA AAATAAGATT TTAATTTCTA AAGGTAAGAA ACCTGCAATT
TTTGAACCAG TTATTCAAGG TATAACAAAA GCAGCTGTAA ATACAGAAAG CTTTATATCA
GCATCCTCAT TCCAAGAAAC AACTAAAGTA TTAGCAAATG CAGCAGTTGA AGGAAAAGTT
GATAGACTTG AAGGACTTAA AGAAAATGTA ACTATAGGTA AGAAAATACC TGGAGGAACA
GGATTTAAAA ATTATAAGGA CTTAAATTTA TTCTTAGGTG AAGTTGACGA GAAAATAATA
GAAGAAATAT AA
 
Protein sequence
MSIRDFDSIQ IKLASPEKIL EWSYGEVTKS ETINYRTLKP ELDGLFCERI FGPTKDYECT 
CGKHKKMKDK GTVCEKCKVT ITTSKVRRER MGHIKLATPI AHIWYSKGTP NKMSLLLGIS
TKELEAVLYF SRYIVIDGGN TEFNKNQIIR EQQYRLCMER NDRGSFRAKM GAEGILELLQ
ELELPVLEKE LETDIDKENS SQKRKKMVKR LKIVRDFISS GNKPEWLILT ILPVIPADLR
PLVQLDGGRF ATSDLNDLYR RVINRNIRLQ KLIDSNAPEI MIRNEKRMLQ EAVDALIDNG
RRGKPVVTQS NRELKSLSNM LKGKQGRFRQ NLLGKRVDYS GRSVIVVGPN LKIHQCGLPK
KMALELYKPF LMRELVKRGI SSNVKTAKKM VEEENEAVWE LIEEIIKNHP VLLNRAPTLH
RLSIQAFEPT LIEGKAIRLH PLVCSAFNAD FDGDQMAVHL VLSPEAQLEA KLLMLATNNI
IAPSSGKPIA VPSQDMVMGC YYMTKERLGE IGENKYFSSI AQLTTAYQNE KVGVHALVNV
RINGNIVKTT PGRILFNQLL PEEIRNYEVT FGKGELGKLI AGLYEQYGFE KTCELIDKIK
EFGYHFATFA GVSVGIEDLQ IPVEKKAILA KADKDVLDIE NAYKAGEIIN DERYRRTVQV
WNKATNDVTK AMMDSLDQFN PVYMMANSGA RGSIAQIRQL GGMRGMMSNT KGEIIEIPIK
ANFREGLNVL EFFMSSHGAR KGLADTALRT ADSGYLTRRL VDVSHELIVN KDDCGSKNHG
IEVSDLTYEG KIIEKLEERI YGRFLAEDLV DNGKVIAKAN TLITKDLLAE IVKRNISSVK
MRSPLTCKLD KGVCKKCYGI DLSNHKEVLL GEAVGVIAAQ SIGEPGTQLT MRTFHTGGVA
TGSEVQSDHR ADEDGKIKYE NIETFTYPDG REIVVSSIGK VILGKYRYEV PSGSVLKVKN
NEKVKKGQVL IEFDPFQTPT ISTVAGRIEF RDIYIKENID VKYDVVERLA IKPIESTQVK
PRVIVYDDKG KKIKEYHINY GSYLLFKEGE MIKPGDIISK LPKIGGGNKD ITGGLPRVQE
LFEARNLKGK AILANVGGRI KFSDKTKKGM RVVEIHDIDK DTVIEEYSIP AGEHLVVSNE
MIINAGDKLT EGPISPHDIL RIKGAVEAQQ FILESVQEVY RSQGVTVNDK HIEIIVKQMF
QKIRIKESGD SLFLEDELVD KKAIERENKI LISKGKKPAI FEPVIQGITK AAVNTESFIS
ASSFQETTKV LANAAVEGKV DRLEGLKENV TIGKKIPGGT GFKNYKDLNL FLGEVDEKII
EEI