Gene Sdel_2230 details

Gene Information

• Locus tag: Sdel_2230
• ID: 8593789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: +
• Start bp: 2237858
• End bp: 2239942
• Gene Length: 2085 bp
• Protein Length: 694 aa
• Translation table: 11
• GC content: 42%
• Product: DNA topoisomerase I
• Protein accession: YP_003305277
• Protein GI: 268680846

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAT CATTGAAAAA TCTCATTATT GTGGAATCAC CCACTAAAGC CAAAACGATT 
AAAAATTTTT TAGGTAAAAA CTATACCGTT GTCGCCTCAA AAGGGCATAT TCGCGATCTT 
CCCAAAAGCA GTTTTGGTAT AAAAATAGAT AACCAAACCT TTATTCCAGA GTACCGTGTA 
CCTAAAGATC ATGCGAGTGT GGTCAAAGAG ATTAAAGAGC TTGCCAAAGA AGCCGATCAA 
GTCTATATCG CAACCGATGA GGACCGTGAG GGTGAAGCGA TTGGTTTTCA CATTGCCACG 
GCTATTGGCA AAGACCCAAA AAGCTTGCCA CGCATTGTTT TTCACGAAAT TACCAAAAAC 
GCCATCACTC ATGCGCTGGA AAATCCTCGT ATTTTAGATG AGAGTAGCAT TAACGCGCAA 
CAAGCTAGAC GTTTGCTTGA TAGAATTGTA GGCTACAAAC TCTCCCCCTT ACTCTCCTCC 
AAAATTCAAA AAGGTTTAAG TGCGGGACGT GTGCAATCCT CCACGCTTAA AATTGTGGTC 
GATAGAGAAA AAGAGATACG AGCCTTTAAA GAGGAAGAAT TTTGGAGCAT TGACGCACTT 
TTTAATAAAA CCATTGAAGC CTCTTTGGTA GAGTTTGAGG GTGAAAAAAT TGAAAAAATG 
AGCATTGGCA ATCAAGAGCG TGCCTATGCC ATTAAAGAAA AACTCTTAAA AGAAGCCTTT 
CATGTCGCAC TTTTGGAGAA AAAAGAGCGT GAAAGCTCCC CAAGTCCTGC TTTTATGACC 
TCAACCTTGC AACAAAGTGC CTCAAGCGCT TTGGGGTATT CACCTAAAAA GACCATGATG 
CTGGCGCAAA CCCTTTATGA GGGTGTTAAA ACCCATCAAG GGGTGCAAGG GGTTATTACC 
TATATGCGAA CGGACTCTTT AAACGTTTCT AAAGAGGCGA TTGAAGCGGC ACGTGAGCAA 
ATTTTAAGCC AATACGGCAA AACCTATTTG CCTGAAAAAG CACGTTTTTA TGCCAACAAA 
AGCAAAGGTG CTCAAGAAGC ACACGAAGCG ATTCGCCCGA CCATTTTAGA GTTTACCCCA 
GCCATTGCCA GTGCGTACTT AGCCCCAGAT GAGCTTAAGC TCTACGCACT CATTTACAAC 
CGCTTTTTAG CGTCTCAAAT GAACAATGCC CGTTTTGAGA GCCAAACCCT TATTTTTGAA 
AGCCAGAGTG GTAAATTTAA AGCCAGTGGA CGAAAACTCC TGTTTGATGG CTTTTACAAA 
GTCTATGGTG ACAACGATAA AGATAAATTG CTTCCTGATT TAGCGCTCAA ACAAGAGGTA 
ACCTTAAGCA AACTCGATGC CAATCAACAC TTTACAGAGC CACCTTCTCG CTACTCAGAA 
GCCAGTTTGA TTAAAAAACT AGAAAGCCTT GGCATTGGCA GACCTTCCAC GTATGCACCG 
ACGATTTCGG TTTTAAGTGC TAGGGATTAC ATTAATATTG AAAAGAAACA GATTGTCCCT 
ACCGAAGTGG CGTTTCAAGT CACGGAGCTT TTAGAACAAC ACTTTCCGCA AATTGTGGAC 
TCCTCTTTTA CCTCAACTAT GGAAGAGCGT CTGGATTTAA TTGCGGAGGA CAAAGAGGAT 
TGGCAGGCAA TTTTATGGAA TTTTTATGAG CCTTTTGATG CGCAAGTTGC CAAAGGAAAA 
ACGGAGATTC AAAGCCAAAA AGTCATCGTT TTCACAGGCG AAATGTGCCC TGAATGTGGC 
AAAGAGCTTG TGCGAAGAAA AGGGCGTTTT GGGGAGTTTA TAGCATGTAG TACTTATCCT 
ACATGTAAAT ACACCCAAAA CCTTAAAAAA GTCAGTGAAA GTGCTCCTAA AGAAAAAGTA 
ACACTGAGTG TGCCTTGCCC TGAATGTGGG GGAGAGATTA TTGAGCGAAG CTCACGTAGG 
GGAAAATTCT TTGGCTGTGG CAATTACCCC AAATGTAAAT TTATCTCCAA TTACGAACCA 
ACCGATAAAA AATGCCCAGA ATGCGGTTAC ATTATGGCAA AACGAGAACT GCGTAAAAAA 
GAGATATATG AATGCATTAA ATGCAAACAC AAAGAAGAGG CGTAA 

 

Protein sequence

MEKSLKNLII VESPTKAKTI KNFLGKNYTV VASKGHIRDL PKSSFGIKID NQTFIPEYRV 
PKDHASVVKE IKELAKEADQ VYIATDEDRE GEAIGFHIAT AIGKDPKSLP RIVFHEITKN 
AITHALENPR ILDESSINAQ QARRLLDRIV GYKLSPLLSS KIQKGLSAGR VQSSTLKIVV 
DREKEIRAFK EEEFWSIDAL FNKTIEASLV EFEGEKIEKM SIGNQERAYA IKEKLLKEAF 
HVALLEKKER ESSPSPAFMT STLQQSASSA LGYSPKKTMM LAQTLYEGVK THQGVQGVIT 
YMRTDSLNVS KEAIEAAREQ ILSQYGKTYL PEKARFYANK SKGAQEAHEA IRPTILEFTP 
AIASAYLAPD ELKLYALIYN RFLASQMNNA RFESQTLIFE SQSGKFKASG RKLLFDGFYK 
VYGDNDKDKL LPDLALKQEV TLSKLDANQH FTEPPSRYSE ASLIKKLESL GIGRPSTYAP 
TISVLSARDY INIEKKQIVP TEVAFQVTEL LEQHFPQIVD SSFTSTMEER LDLIAEDKED 
WQAILWNFYE PFDAQVAKGK TEIQSQKVIV FTGEMCPECG KELVRRKGRF GEFIACSTYP 
TCKYTQNLKK VSESAPKEKV TLSVPCPECG GEIIERSSRR GKFFGCGNYP KCKFISNYEP 
TDKKCPECGY IMAKRELRKK EIYECIKCKH KEEA