| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_2033 |
|---|
| Symbol | |
|---|
| ID | 8593587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | + |
|---|
| Start bp | 2046886 |
|---|
| End bp | 2048478 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | nickel ABC transporter, periplasmic nickel- binding protein |
|---|
| Protein accession | YP_003305081 |
|---|
| Protein GI | 268680650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATAG GAAAAAAAAG AGGAGCCTTA CTATGCTCAG CCCTTATCTT GGCATTTTTG
ACGGGATGTG AAAGCAAACC CAAAGAGGTC AAGGTGGCTA AAACAGAGTT GGTATATGCC
AGTACCAAAG ATATTCGTAA CATTAATCCG CACTTGTACG GAGGAGAGAT GTCCGCTCAA
AACATGGTCT TTGAATCTTT GGTCATGAAC ACGCCTGAAG GGGTTAAACC GTGGTTGGCT
GAACGTTGGG AGATCAGTAG TGATGGCAAA AGCTACACCT TTTATTTGCG CAAAGATGTC
AAATTTAGTG ATGGTAGCCC TTTTGATGCG ACGGTGGTGA AGAAAAACAT CGATGCGGTG
ATTGATAATC GTGCAAGACA CGCATGGTTA GAGTTGGTCA ATCAAATCGA AGGCAGTGAA
GTCGTCGATA ACTTTACCTA TAAACTTACC CTCAAAAATC CCTACTATCC AACTTTAAGC
GAACTTGCGA TGACAAGACC CTTTCGTTTC ATTGCGCCAT CGTGCTTTAT CGAGGGTGCA
ACCAAAAATG GGGTAAGTTG TTATGTAGGA ACAGGTGCGT GGGTGCTTTC AGAGCATCAG
AAAAACGCTT TTGCACTCTT TAAGAAAAAC CCAAACTATT GGGGAGAAAA AGCAAAACTG
GAACAGATTA AATGGCGAGT GATGCCTGAT CATCAAAGTG TGTTACTCGC ACTGCAAAAA
GGTGAAATCG ACCTTATTTT TGGAGCGGAT GGCGACATGA TAGACCTCAA TGCCTTTAGT
GTGCTTCAAA AAGAGGGAAA ATACACGACC TTGCTCAGCC AACCCACCGC CTCTCGTGCC
ATTTTACTCA ACACCAAACA GCCTATCACG GGGGAAGCAA AGCTAAGAGA AGCTCTGCAA
CACGCTATCA ATAAAGAGAT GATCGTCTCT GGCATTTTAA ATCACTCAGA AAATAGCGCC
AACACGCTTT TTGCCCCAAT AACGCCCTAT TGCGATGTGC CGCTCTCTCG CAAACTTTAC
GATGTTGAAA AAGCTAAAGC CTTGCTGGAT GAAGCGGGTT GGATGATGGA TGAGAAGCTA
GGATATCGAA GCAAAGAGGG AAAAATACTC TCCTTGCGTC TTTATTTTAA TGCCAACAAC
GCACAAGAAA AAGCCATTAG CGAGTACATT CAAAGCAATC TTAAAGAGGT GGGCGTGGAG
CTTAAGATTA TTGGAGAGGA GAAACAAGCC TTTTTAGACA GACAAAAAAG CGGTGACTTT
GACTTACAAT ACGCTCTTTC ATGGGGAACA CCCTACGATC CTCAATCGTT CGTCTCTTCA
TGGCGTATGG CAGCGCATGG CGATTATCAA GCGCAGTTAG GGTTAGAGAA AAAAGCGTGG
TTAGATGCGC AAATTCAAGC CATTTTGATT GAACCATCAC ACGAAAAGCG CACAAAAATG
TACGCAGAGA TTTTGACTTA CATTCACGAT GCAAACGTCT ATGTGCCACT GAGTTATGCT
CGCACCAAAG CGGTATTTAC ACCTAAACTT AAAGGGGTGA GTTTTAATCC TTCTCAGTAT
GAAATCCCTT TTGAAAAGAT GTTTTTCGAG TAA
|
|---|
| Protein sequence | MMIGKKRGAL LCSALILAFL TGCESKPKEV KVAKTELVYA STKDIRNINP HLYGGEMSAQ
NMVFESLVMN TPEGVKPWLA ERWEISSDGK SYTFYLRKDV KFSDGSPFDA TVVKKNIDAV
IDNRARHAWL ELVNQIEGSE VVDNFTYKLT LKNPYYPTLS ELAMTRPFRF IAPSCFIEGA
TKNGVSCYVG TGAWVLSEHQ KNAFALFKKN PNYWGEKAKL EQIKWRVMPD HQSVLLALQK
GEIDLIFGAD GDMIDLNAFS VLQKEGKYTT LLSQPTASRA ILLNTKQPIT GEAKLREALQ
HAINKEMIVS GILNHSENSA NTLFAPITPY CDVPLSRKLY DVEKAKALLD EAGWMMDEKL
GYRSKEGKIL SLRLYFNANN AQEKAISEYI QSNLKEVGVE LKIIGEEKQA FLDRQKSGDF
DLQYALSWGT PYDPQSFVSS WRMAAHGDYQ AQLGLEKKAW LDAQIQAILI EPSHEKRTKM
YAEILTYIHD ANVYVPLSYA RTKAVFTPKL KGVSFNPSQY EIPFEKMFFE
|
|---|
| |