Gene Sdel_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_1840 
Symbol 
ID8593392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp1867576 
End bp1868769 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content42% 
IMG OID 
ProductUDP-N-acetylmuramoylalanine/D-glutamate ligase 
Protein accessionYP_003304890 
Protein GI268680459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.473962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACAC TTTTTGGACA CGGAAAAACA ACCAAAGCAA TTGCAAAACG CTATGCAGGA 
AACTGCCAAA TTTTTGATGA TGCCTTTACA TGTAAAGGTG AAGATGAATA CGGAAACCTC
CTACTTCCAC CCTCTTTTTT TGAGCCAGAA AAAAGCAGTG TAGAGATTCC AAGTCCAGGC
TTTCCAACAG AGCATCTACT GATTCAAAAA GCCTTACATG TCACCAGCGA ATATGACTTT
TTTAAAGAGG CGATGCCTTT TAGCATCTGG ATTAGTGGCA CCAATGGCAA AACCACTACC
ACCCAAATGT GCCAATTTCT CTTAGAAAAA CAAGGTGCCG TTGCAGGTGG AAATATTGGG
ACACCTCTAG CAGAATTGGA TGAAAAAGCG CCGATTTGGG TCTTAGAAAC CAGCTCGTTT
ACCTTTCACT ACACCAAAGT CACCGCACCC GATATGTATC TGCTTTTACC CATTAAGCCT
GACCATCTGA CATGGCATGG AAGTATGGAA GCTTACATAG ACGCAAAACT CTCTCCTTTG
GCACGCATGA AAGAAGGGAG TGTGGCTATC TTGCCAAAAG CACACGCCAA CGTGAAAACC
CTAGCCCATG TGATTGCGTA TGAGAATGAG GAAGATTTAG CCCAACAATT AGGCATAGAA
CTTTCAAAAA TAAACTTTAA AACACCCTTT TTACTCGACG CTGTGCTTGC GATGAGTGCA
CAAAAAGTTC TTTTTGATAC CATTGATTAC GAGCGCATTA ATACCTTTAA AATCGACCAT
TATAAAATTG AAGAGTTCCA CGATAAACAA GGACGTCTCT GGGTCGATGA CTCCAAGGGA
ACCAATGTGG ATGCGACCAT TGAAGCGCTT AAACGCTATA AAGATGAAGA AATTTTACTC
GTTTTAGGCG GTGATGATAA AGGGGTCGAT TTGCAAGAGC TTTTTGACTT TATGAAACCT
TTACATGTAA AGATATTTGC CATTGGCTCG AACACCGAAC GACTGGCTAC CTTTGCGCAA
AAAGAGGGGC TGTGGCTTTC TAAATGCTTT GTACTTGAAG AAGCCATGAA GCAGATTCAT
GCCCTCCACA CCACCAAAAG CGTTGCCCTT CTCTCTCCTG CTGCTGCGAG TTTGGATCAA
TTCAAATCGT ATGCTCACCG AGGTGATTTA TTTAAGGCTT TGGCTCTTTC TTGA
 
Protein sequence
MITLFGHGKT TKAIAKRYAG NCQIFDDAFT CKGEDEYGNL LLPPSFFEPE KSSVEIPSPG 
FPTEHLLIQK ALHVTSEYDF FKEAMPFSIW ISGTNGKTTT TQMCQFLLEK QGAVAGGNIG
TPLAELDEKA PIWVLETSSF TFHYTKVTAP DMYLLLPIKP DHLTWHGSME AYIDAKLSPL
ARMKEGSVAI LPKAHANVKT LAHVIAYENE EDLAQQLGIE LSKINFKTPF LLDAVLAMSA
QKVLFDTIDY ERINTFKIDH YKIEEFHDKQ GRLWVDDSKG TNVDATIEAL KRYKDEEILL
VLGGDDKGVD LQELFDFMKP LHVKIFAIGS NTERLATFAQ KEGLWLSKCF VLEEAMKQIH
ALHTTKSVAL LSPAAASLDQ FKSYAHRGDL FKALALS