Gene Sdel_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_1730 
Symbol 
ID8593281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp1756344 
End bp1757174 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content40% 
IMG OID 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_003304780 
Protein GI268680349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.351236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG AGTTGCAAAG TCTCCAGCGT TTTTATGCGG TTGTGATAGA GTTTTTAACC 
ACGTACAGTT TTCAGCTAGT GGGTGCTTTT ATTATTGTGC TTTTAGGCTG GTTCGCCTCC
AAATATGTCT ATCTCCTTTT ATTACGTCTT TTTGAGCGTC ATCAGTTTGA TACGACCCTT
GCTAAATTTA TCGCCAATGT TGCAAAAATA CTTATTTTAG CGGCAATGAG TGTCGTGGCA
CTGGGAAAAG TGGGTATTTC CATTGCTCCT TTTGTCGCCG CGATTGGTGC GGTTTCTCTC
ACCGCTGGTT TGGCGCTTCA AGGCAGTGTT TCTAACTATG CGGCGGGTAT TTTACTCATT
ATCTCACGTC CATTTAAAGT AGGCGATACG CTGTTGGTTT CAGGTGTGTA TGGCGTGGTT
GAAGAGATAA AACTCTCCTA TACGATGCTT CGTAATGAAG ATGAAGAGCT TATTACCATT
CCTAATAAGC AGATGATTGG TGACATTTTG GTAAATTCGT TTGAATACAG GGTGGTTGAG
TCACGTTTGG GTGTTTCGTA TGAAAAGGAG CCTCATAAAG CCATAGAGAT TATCCAAAAT
GTATTCATAA ACCATCCTAG CGTCACTCAA GAGCATATTC CTATTGTGGG TATTTCTAAA
TTTGGTGATA GTGCCATAGA ACTTGGACTT CGCTACTGGG TACCGACACG AAGCTATTTT
AAAACCCAAT ATGAAATCAA TTTAGCCATT TATGATGCTT TGCATCTCAA TCATATTGCC
ATCTCATTTA TACAAAGAGA AGTCCGTATT TTAGAGCATC TTGAAAAATA A
 
Protein sequence
MEKELQSLQR FYAVVIEFLT TYSFQLVGAF IIVLLGWFAS KYVYLLLLRL FERHQFDTTL 
AKFIANVAKI LILAAMSVVA LGKVGISIAP FVAAIGAVSL TAGLALQGSV SNYAAGILLI
ISRPFKVGDT LLVSGVYGVV EEIKLSYTML RNEDEELITI PNKQMIGDIL VNSFEYRVVE
SRLGVSYEKE PHKAIEIIQN VFINHPSVTQ EHIPIVGISK FGDSAIELGL RYWVPTRSYF
KTQYEINLAI YDALHLNHIA ISFIQREVRI LEHLEK