| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_1596 |
|---|
| Symbol | |
|---|
| ID | 8593136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | - |
|---|
| Start bp | 1613477 |
|---|
| End bp | 1614541 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| Protein accession | YP_003304647 |
|---|
| Protein GI | 268680216 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAC GATACCCTAC GAAGCAAATT TTTGTTGGCA ATGTCCCTGT TGGCGGCGAT
GCTAAAATCC CTGTACAATC CATGACTTTT TCAAAAACCC ATGACGTTCA AGGTACATTA
GAGCAGATTA AACGGTTGCA TTTTGCGGGA TGTGATATTG TCCGTGTCGC TGTGCCTGAT
TATGAAGATG CTTATGCGCT TAAAGCGATT AAAGCAGAGT CTTCTTTACC GATTGTGGCG
GATATTCACT TTAACTACCG TTTTGCACTC ATTGCAGCGG AGGTGGTGGA TTGTATTCGT
ATCAATCCAG GGAACATTGG GAACAAAGAG CGTGTCAAAG AGGTCGTAAA AGCGTGCAAT
GAACGTAATA TTCCCATTCG CATAGGGGTT AACAGTGGCA GTTTGGAGAA ACAGTTTGAT
GAGAAGTATG GCGCAACCAC AAAAGCTATG GTCGAATCAG CCCTTTATAA CATTAAATAC
CTAGAAGATT TGGGCTTTAC CAATATGAAA GTCTCCCTAA AAGCGAGTGA TGTGGAACGT
ACTGTTGAAG CGTACCGTAT GTTACGTCCT TTGGTGGAGT ATCCCTTTCA TTTGGGTGTT
ACGGAAGCTG GAACCTTGTT TCACTCTACC ATCAAATCGT CCATCGCTTT AGGTACCCTT
TTGTTAGATG GCATTGGCGA TACGCTTCGA GTTTCCATTA CAGGAGAGCT TGAAGAGGAG
ATAAGCGTAG GGCGAGCCAT TTTAAAAGAC AGTGGTGTGC AAGCAGAGGG ATTAAACATT
ATCTCATGTC CGACATGTGG GCGTTTGGAG GCAAATTTGG TCAATGCCGT TGCGGAAGTG
GAGCGTCGTA CCAAGCATAT TAAAGCGCCT TTAAATATCT CGGTGATGGG ATGCGTGGTC
AATGCCATTG GTGAGGCAAA ACATGCGGAT GTTGCCATTG CGTTTGGAAA AGGGCAGGGG
CTTGTGATGG TCAAAGGAGA AGTTGTGGCA AAACTTAAAG AGGAAGATTT AGTCGATACC
TTTTTAAAAG AGGTTGAAAA AGCGGCACGA GAGTATAAAG CATGA
|
|---|
| Protein sequence | MIKRYPTKQI FVGNVPVGGD AKIPVQSMTF SKTHDVQGTL EQIKRLHFAG CDIVRVAVPD
YEDAYALKAI KAESSLPIVA DIHFNYRFAL IAAEVVDCIR INPGNIGNKE RVKEVVKACN
ERNIPIRIGV NSGSLEKQFD EKYGATTKAM VESALYNIKY LEDLGFTNMK VSLKASDVER
TVEAYRMLRP LVEYPFHLGV TEAGTLFHST IKSSIALGTL LLDGIGDTLR VSITGELEEE
ISVGRAILKD SGVQAEGLNI ISCPTCGRLE ANLVNAVAEV ERRTKHIKAP LNISVMGCVV
NAIGEAKHAD VAIAFGKGQG LVMVKGEVVA KLKEEDLVDT FLKEVEKAAR EYKA
|
|---|
| |