| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_1546 |
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| Symbol | |
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| ID | 8593086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurospirillum deleyianum DSM 6946 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013512 |
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| Strand | + |
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| Start bp | 1559824 |
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| End bp | 1561677 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_003304597 |
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| Protein GI | 268680166 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.413231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAA AAGAACTGTA TACAGAATTA GAAGAGCTTT TTGTCGAAAA TGAAAAATCT
TATGTCACGT ATGAAAACGT GATGGAACTC TTTGTAAAAC CCCCAACACC CGCAAACGTT
AAAAAGTTGA TGGGATTGCT CGAAAAATAC AAAGTCACCC TTATTTCTTC TGCTGAAATT
GCGAAACTTC GCAACAAAGA AGAGGCAAAA AAACGTGAAG AAGAGCGCCA AAAACTCCAA
GACGAAGCCT TAGAAGACGA GTTTGACCTT GCCAGTGAAA AAGAGCTTTT AGAGTGGTCA
AGAAGCGACA GTCCTGTGCG TATGTATCTA AGAGAGATGG GACAAATTTC GCTTTTAACC
AAAGAAGAAG AGATTGACAT TAGTAAAAAG ATAGAGTTTG GCGAAGATAT TATTATTGAT
GCGTTTTGTT CAGTGCCTTA TCTTATCGAC TTTATTTTAG ATTATAAAGA AGCCTTGATT
AATCGTGAAC GCCGTGTTAA AGAGTTGTTT AAAACCTTTG AAGATGACGA TGATGGCGAT
GACGATGATA GCGATGATGG GGAGGAGTTT GATGAAGAAG GGGAAGAGAA ACGCCCCCTT
TCTAAAAAAG ATAACTCTCG AACCGAAAAA GTCATCGAAA GCTTTAAAGC CTTAGAAAAA
GCAAAAAAAG ATTGGATGAA GAGTTTTGCT CGTCCACCTG AAGAGAATCT TGATGCTGAA
GAGATGATGA ATTACGATTT GGCATTGGCG TATAAAAAGA AATTGCTTAA AGACGCATTG
ATGGATTTAG GGCCAACCAG TAAACTCATT AATGAACTCG TCAAATCTAT GGAAACAGCT
CTTAAGAGTG ATTTTGAGTT TGATAAAGAA CTCAAACGCC TAGAGTATCG TTTACCTCTT
TTTAACGAAA CACTCAAAGA AAATCATCAA AATCTTCTTA AAAACATCAT TGATTTAAAC
AAAGAAGATA TCGCTACAAT GGTTCCAGAA GCTACAATGG TTTCAACGTA TATGGAAATT
AAAAAGCTTT TTCAAACCAA AGAAGCCAGT AAGCAAGGCT TTGATTTGGA CCCTGAAAAG
CTCAAAGAGA TTTTGGAGCA AATCAAACGG GGTAAAAAAA TTGCCGATGA GTCTAAAACA
CGTATGGCAA AAAGTAACCT TCGTCTGGTT GTTTCTATTG CTAAACGTTA CACCAACCGA
GGCTTGCCAT TTTTGGATTT GATTCAAGAA GGAAACATTG GTTTGATGAA AGCGGTTGAT
AAATTTGAGT ACAAAAAAGG GTACAAATTT TCAACCTACG CCACATGGTG GATTCGTCAA
GCCATCTCAC GTGCGATTGC CGATCAAGCC CGTACCATTC GTATCCCAAT TCATATGATT
GAGACCATTA ACCGTATCAA TAAAATCATT CGTAAACACC TTCAAGAAGA AGGTAAAGAG
CCAGACATCG AGACCATTGC ATTGGAAGTG GGCTTGAGTG CGGATAAAGT TAAAAACGTT
ATTAAAATCA CCAAAGAGCC TATTTCGTTG GAAGCGCCTA TTGGTAACGA AGACGATGGA
AAATTTGGTG ATTTTGTCGA AGATAAAACA TCCATTGCCC CTCTTGAGCA TATTTTAAAA
TCAGACCTTA AAGAGCAAAT TGACGATGTA CTTGATCAGC TCAACGACAG AGAAAAAGCG
GTCATCCGTA TGCGTTTTGG TTTAATGCAC GATGAGAGCG ATAGAACCTT AGAAGAGATA
GGTAAAGAGC TTAATGTCAC TCGTGAACGT GTGCGCCAGA TTGAAAGTTC TGCCATTAAA
AAGCTTAAAC ATCCAAAAGT AGGAAGAAAA CTTAAAAATT ATATTGAAAG CTAA
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| Protein sequence | MASKELYTEL EELFVENEKS YVTYENVMEL FVKPPTPANV KKLMGLLEKY KVTLISSAEI
AKLRNKEEAK KREEERQKLQ DEALEDEFDL ASEKELLEWS RSDSPVRMYL REMGQISLLT
KEEEIDISKK IEFGEDIIID AFCSVPYLID FILDYKEALI NRERRVKELF KTFEDDDDGD
DDDSDDGEEF DEEGEEKRPL SKKDNSRTEK VIESFKALEK AKKDWMKSFA RPPEENLDAE
EMMNYDLALA YKKKLLKDAL MDLGPTSKLI NELVKSMETA LKSDFEFDKE LKRLEYRLPL
FNETLKENHQ NLLKNIIDLN KEDIATMVPE ATMVSTYMEI KKLFQTKEAS KQGFDLDPEK
LKEILEQIKR GKKIADESKT RMAKSNLRLV VSIAKRYTNR GLPFLDLIQE GNIGLMKAVD
KFEYKKGYKF STYATWWIRQ AISRAIADQA RTIRIPIHMI ETINRINKII RKHLQEEGKE
PDIETIALEV GLSADKVKNV IKITKEPISL EAPIGNEDDG KFGDFVEDKT SIAPLEHILK
SDLKEQIDDV LDQLNDREKA VIRMRFGLMH DESDRTLEEI GKELNVTRER VRQIESSAIK
KLKHPKVGRK LKNYIES
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