Gene Sdel_1371 details

Gene Information

• Locus tag: Sdel_1371
• ID: 8592911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: -
• Start bp: 1384072
• End bp: 1386018
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 43%
• Product: DNA ligase, NAD-dependent
• Protein accession: YP_003304426
• Protein GI: 268679995

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00123694
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTTC AAGAATACAG TGAAAAAATA GAGATTTTAA AAGCGTGGGC AAAAGCCTAT 
TACGTCGATG ATGCGCCCAT TGCCAGTGAT GAAGAGTATG ACAGGCTCTA CCATGAGATT 
TTGGCATTTG AGAAGGAAAA TCCTCTCTTT GCGGATGAGA GTAGCCCTAC AAAGCGTGTG 
GGTGGTATGG TGCTTGAAGG TTTTAATAAA GCCTCGCATA AAGCCCGTAT GTGGAGCATG 
GAAGATGTTT TTGATGAACA CGATTTGGAT GCGTGGATAG AGCGTGTTAA AAAAGTTAAA 
GAAAATTTTA CCTTTTATTG CGAACCTAAG TTTGATGGGG CGAGTATGAA CCTTATTTAT 
GACAAAGGTG TGCTTCAACA AGCGATTACC AGAGGCGATG GAAGCATCGG CGAGGATGTC 
ACGCAAAATG TTAAAACGAT AGGTTCTATT CCGTTGCAGA TTGCCTATGA AGGGTTGATT 
GAGATTCGAG GCGAAGTGGT GATTAAAAAG GCGGATTTTG AGTGCTTAAA TGAGGAGCGT 
TTGCACACAA ATGAGCCACT TTTTGCGAAT CCTAGAAATG CAGCCGCAGG GAGTTTGAGA 
CAGTTAGATA CGAGTGTAAC AGCTAAACGT AAATTGATGT TTTATCCATG GGGCATTGGG 
GAAAATCAGT TAGTGCAGAC ACGTTTAAGT GAGAAAATGC GCTTTGTGTA TGATTTGGGT 
TTTTTACAAC CACCACGCAT TGTTGTCACA CAAAACGTGG AAGACGTTCA TATGCTTTAT 
CACGAATTGA TTGAAACACG TGATGCCATT GAGATGATGA TGGATGGCAT GGTGGTAAAA 
GTCGATGAAA TTGCCTTACA AGAGGAGTTA GGCTATACCG TGAAGTATCC TAAATGGATG 
GTGGCGTTTA AATTTCCAGC CATTGAGAAG GTAACAAAGC TTAGAGCCAT TACCCTGCAA 
GTGGGACGTA CGGGGGTGGT CACACCTGTG GCGGAAGTCG AAGCGGTGAA TATTGAAGGG 
GTTGTGGTGG AGCGCGCCAC ACTTCACAAT TTTGATGAAA TTGAGCGTAA AGATATTCGC 
ATAGGGGATA GTGTTATTAT TATTCGTAGT GGTGATGTGA TTCCAAAGAT TATTAAAGTG 
TTGGTGGAGC GCAGGGACGG CACAGAAGTC ATTCCCAAAC GTCCTTTGGT CTGTCCTGTA 
TGCGGGGGAG AACTTTTGGA TGAGGGAGCG CTTATTAAGT GTCAAAACCT CTCCTGTGAT 
GCGAGGGTTG TTGGAGCGAT GATTCACTTT GCTTCGAAAA AAGCGCTCAA TATTGACGGT 
CTTGGTGATA AGATTATTGA GCAACTCTAT GCGCAAAAAG TGGTTTTACA TGTAAAAGAT 
TTGTACACAC TCTCTTTAGA GCAGCTCTTA GCATTAGAGG GATTTAAAGT TAAAAAAGCA 
CAAAACCTTT TGGATGCGAT TGCTCAGAGT AAAGGGGTGG CTTTAGAGAA GTTTATTAAT 
GCTTTGGGCA TTGAGCACAT TGGTGAAGTA GCGGCTAAAA AGATTGCGAG AACCTTTGGC 
TTAGAGTGGT TAGAGGCAAC GCACGAGCAG ATTATTGGCT TAGAGGGATT TGGTGAAGAG 
ATGGCAAAAA GTTTGGTGGA GTTTATTCAC GTCAATGCCG TTGAGACCAA AGAGCTTATG 
GGGATTATTG CGCCTGTGGC ATCAAAACTT GAAATTACAG AGTCGGTTTT TACAGGCAAA 
ACGGTTGTCT TAACAGGCTC TATGTCCAAA TCTCGTGATG AGATGAAAGC GATGCTTGAA 
TCTTTAGGAG CGAAAGTGAG TGGCAGTGTC TCTAAGAAAA CGGATTTTGT GATTTTTGGG 
GAAGAGGCAG GTAGTAAATT GGACAAAGCA CTTGAATTGG GTGTCAAAAC GCTGAGTGAA 
GCGGAAGTAA ATGAGATGTT AATATGA 

 

Protein sequence

MNFQEYSEKI EILKAWAKAY YVDDAPIASD EEYDRLYHEI LAFEKENPLF ADESSPTKRV 
GGMVLEGFNK ASHKARMWSM EDVFDEHDLD AWIERVKKVK ENFTFYCEPK FDGASMNLIY 
DKGVLQQAIT RGDGSIGEDV TQNVKTIGSI PLQIAYEGLI EIRGEVVIKK ADFECLNEER 
LHTNEPLFAN PRNAAAGSLR QLDTSVTAKR KLMFYPWGIG ENQLVQTRLS EKMRFVYDLG 
FLQPPRIVVT QNVEDVHMLY HELIETRDAI EMMMDGMVVK VDEIALQEEL GYTVKYPKWM 
VAFKFPAIEK VTKLRAITLQ VGRTGVVTPV AEVEAVNIEG VVVERATLHN FDEIERKDIR 
IGDSVIIIRS GDVIPKIIKV LVERRDGTEV IPKRPLVCPV CGGELLDEGA LIKCQNLSCD 
ARVVGAMIHF ASKKALNIDG LGDKIIEQLY AQKVVLHVKD LYTLSLEQLL ALEGFKVKKA 
QNLLDAIAQS KGVALEKFIN ALGIEHIGEV AAKKIARTFG LEWLEATHEQ IIGLEGFGEE 
MAKSLVEFIH VNAVETKELM GIIAPVASKL EITESVFTGK TVVLTGSMSK SRDEMKAMLE 
SLGAKVSGSV SKKTDFVIFG EEAGSKLDKA LELGVKTLSE AEVNEMLI