Gene Sdel_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_1370 
Symbol 
ID8592910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand- 
Start bp1383359 
End bp1384075 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content39% 
IMG OID 
Producthemolysin A 
Protein accessionYP_003304425 
Protein GI268679994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.700808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAG ACAATTATGT ATTTGAAAAA GGGTTCGCTC AAAGTCGCAA TAAAGCATCT 
GAACTCATTA AAGAGGGTAG TGTTTGGGTG AATGGTAACG TAGAGCGTAA AAGCTCTTTT 
GAAGTCTGTG AGAATGATAA GGTAGATGTT GAAAAAATTT CCCAATATGT CAGCCGTGCA 
GGACTTAAAT TGCGTGGATT TATCAATGAT CTCTCTTTAC ATGTAAAAGG CTTAGAGGTC 
TTGGATATTG GCAGTAGTAC AGGTGGATTT GTACAAGTTT GGTTAGAAGA AGAAGTGAAG 
AGTGTGACGG CGGTGGACGT GGGAAGTGAG CAACTTCACT CCACTCTTAG AGTCGATAAT 
CGCATTATTT TACATGAAAA TAGTGATATA CGACTTTTTA CCCCTAATAA GACGTATGAT 
ATGGTCAGTT GTGATGTTTC ATTTATTGGG GTGAGTGCTC TTTTAGGAGA GATTGACCGT 
TTGGCAAAAT GTGACATTAT TATTTTGTTT AAGCCTCAAT TTGAAGTGGG AAAAAATGTT 
AAGCGTACGA CCAAAGGTGT TGTCAAAGAT GGTGCGGCTA TCGTCCGTGC GCAACAACAG 
TTTGAATCAA AAACGGTGGC TCTAGGATGG GAACTTATAG AGAAAAAAGA ATCTCGCATC 
AAAGGAAAAG AGGGGAATGT TGAAACGTTC TACTATTTTA AGAAAAGAGA GTGTTGA
 
Protein sequence
MRLDNYVFEK GFAQSRNKAS ELIKEGSVWV NGNVERKSSF EVCENDKVDV EKISQYVSRA 
GLKLRGFIND LSLHVKGLEV LDIGSSTGGF VQVWLEEEVK SVTAVDVGSE QLHSTLRVDN 
RIILHENSDI RLFTPNKTYD MVSCDVSFIG VSALLGEIDR LAKCDIIILF KPQFEVGKNV 
KRTTKGVVKD GAAIVRAQQQ FESKTVALGW ELIEKKESRI KGKEGNVETF YYFKKREC