Gene Sdel_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_1325 
Symbol 
ID8592865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp1341338 
End bp1343041 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content42% 
IMG OID 
Productprolyl-tRNA synthetase 
Protein accessionYP_003304380 
Protein GI268679949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000449091 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT CAAAGCTATA TGCACCAACA ACCAAAGATG CGCCAAAGGA TGCAACGCTT 
CCAAGCCATC AGTATTTGGT GCGAGGCGGG TTTATTGTTC AAGTGGGCAG TGGACTCTAT
AATTTTTTGC CAATGGGAAA AATCGTTCTG GATAAAATCA GAAATGTTGT CAAAGAAGAG
ATGGATGAAA CGGGTGCTCA AGAGATTCAA ATGGGTGTGG TCAGTCCAGC TGAGCTTTGG
AAACAAAGTG GACGCTATGA TGTCTTTGGC AAAGAGTTAT GTCGCATTAA AGATAGAAAA
GAGAATGAGT TTGTACTAGG ACCAACCCAT GAAGAGGTGG TTGTAGATAT CGTGAGAAAT
CGCATTAACA GTTATAAACA GCTTCCATTA CATTTGTATC AAATTACGAC AAAATTCCGT
GATGAGGCAC GTCCTCGTTT TGGGCTTTTA AGGGGTCGTG AGTTCATTAT GAAAGATGGG
TATAGCTTTC ATGAGGATGA AGCGAGTATG AAAGCTGAAT TTGACGTGAT GGAGCAAACT
TATACGAAGA TTTTTAATCG TTTGGGACTT GATTTTAGAG CGGTTGAGGC TGATAGCGGT
GCGATTGGGG GAAGTGGTAG TAAAGAGTTT ATGGTATTGG CACAAAACGG TGAAGATGAC
ATTGTGGTGT GTGAACAGTG TTCGTATGCG GCGAATATTG AAGCGGCTAA ACGTGCTCCT
AAAACGACCA CGCTTGAAGC ACCAGAAGCC AATCTCTCTA AATTTAAAAC ACCTGATATG
AAAACGATTG AAGATGTGTG TAACTTCTTT AAAGTGGATG CCTTTTACAG CATTAAAGCC
GTGGTTAAAA AAGCAATTTA CGTTGATAAA GAAGAGGTCG TTGTTTTCTT TGTACGTGGC
AATGATGAAC TGCAAGAGAC CAAAGCGCAA AATGCGTGTG GTGCGCTTGA TTTGGTCGAT
GCTAGTCTTG AAGAGGTGGA GCGAGCAGGC TTAAAAGCAG GATTTATCGG ACCTGTGGGG
CTAGAATGTG TAAAATTTTA CATAGATTTA GAACTTAAAG AGGCAAAGAA CCTTATTTGT
GGGGCAAATG AGGTGGATTA TCACATGGTC GGTGTGGGGA TGTTTAACTT CAAAGAAGAG
CGATATGCAG ACCTTGTTGC GGTCAAAGAA GGCGATGTGT GTGCGTGTTG TGGTGGTAGA
CTCGGCATTA CCAAAGGGAT TGAAGTCGGG CATATTTTCC AACTGGGACA AAAATACGCC
AAAGCGATGG GCGCAACCTT TTTAGATAAA AATGGCAAAG CACAACCTTT TTACATGGGA
TGTTATGGTG TGGGTGTGAG TCGTTTGGTA GCGGTGATGA TCGAGGCAAG CCACGATGAG
AAAGGGTGTA TTTGGAACAA GCAAACCGCT CCATACCTCT TAGATATTAT TGTCTCTAAC
AGCAAAGATG AGGCACAAAG TGCGTATGCT GAGGAGATTT ATAGTGCTTT GATGCAAGAG
CGTTTAAGTG TGCTTTTAGA TGATAGAAAT GAGCGTTTTG GCTTTAAAAT GAAAGATTAT
GAGCTCATAG GACTTCCGTA TGCGCTGATT GTGGGTAAGG AGCTCGAAGA GGGTTTTGTG
GAGATTGTTG AGCGTAAAAC ATTAGAAAAA ACAGTCGTGA AAAAAGAAGA AGCACTCTTA
AAACTAAGGG AACTCTTAGC GTGA
 
Protein sequence
MKFSKLYAPT TKDAPKDATL PSHQYLVRGG FIVQVGSGLY NFLPMGKIVL DKIRNVVKEE 
MDETGAQEIQ MGVVSPAELW KQSGRYDVFG KELCRIKDRK ENEFVLGPTH EEVVVDIVRN
RINSYKQLPL HLYQITTKFR DEARPRFGLL RGREFIMKDG YSFHEDEASM KAEFDVMEQT
YTKIFNRLGL DFRAVEADSG AIGGSGSKEF MVLAQNGEDD IVVCEQCSYA ANIEAAKRAP
KTTTLEAPEA NLSKFKTPDM KTIEDVCNFF KVDAFYSIKA VVKKAIYVDK EEVVVFFVRG
NDELQETKAQ NACGALDLVD ASLEEVERAG LKAGFIGPVG LECVKFYIDL ELKEAKNLIC
GANEVDYHMV GVGMFNFKEE RYADLVAVKE GDVCACCGGR LGITKGIEVG HIFQLGQKYA
KAMGATFLDK NGKAQPFYMG CYGVGVSRLV AVMIEASHDE KGCIWNKQTA PYLLDIIVSN
SKDEAQSAYA EEIYSALMQE RLSVLLDDRN ERFGFKMKDY ELIGLPYALI VGKELEEGFV
EIVERKTLEK TVVKKEEALL KLRELLA