Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1165 |
Symbol | |
ID | 8592703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 1178746 |
End bp | 1181874 |
Gene Length | 3129 bp |
Protein Length | 1042 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | YP_003304223 |
Protein GI | 268679792 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000232541 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCAA AATTCTTTAT CAACAGACCT ATTTTTGCAA CCGTCCTTTC GATAGTTGTG ATTATTGCGG GTTTGATGAG TATTCGGGCG TTGCCCATTG AGGAGTATCC TGAGGTAACC CCTCCGCAAG TAAGCGTTGA GGCAACTTAT GCGGGTGCGA GTGCGGAGAC CATCTCTAAA ACCGTAGCAG CCCCACTAGA GCAGCAAATT AATGGTGTGG AAGATATGAT TTATATGTCT TCAACGGCTT CTTCAACAGG CTCATTAAGC ATTAATGTTT ACTTTAAAAT TGGAACTGAT CCTGATCAAG CGACCATTAA CGTCAATAAC CGTGTCCAAG CCGCCCTTAA CAAGCTTCCA AGCGAAGTTC AAGCGCAAGG TGTGACGGTC ACCAAGCAGT CTTCGACCAT TTTAAAAGTT ATCTCGATTA TCTCACCCAA TAACAGTTAT GATGAAATTT ACATGGCTAA CTATGCGCTC ATTAACGTCA TTGATGAGCT TAAAAGGGTT GAGGGCGTGG GTAATGCTTC TTTGTTTGGC AATCAAAACT ACTCCATGCG TGTTTGGATG AAACCTGACC AGCTGGCAAA ATACAATCTC ACACCCACCG ATGTCATCAA TGCCATCTCC GAGCAAAATG CGCAGTTCGC AACGGGTCGT TTTAACCAAT CACCTTCTAA AACCTCTCAA GCGTATACGT TTACCGTGAC CACGCAAGGA CGTTTTGACA AAGTGGAAGA GTTTGAGAAA ATTATTTTAA AATCAAACAA AGATGGCTCA ACCCTTCGCT TAAAAGATGT AGCACGTTTG GAATTGGGTG CTGAATCCTA CGATGTGACA TCTACTTTAA ATGGGCAAAC GATGGTACCT ATTGGTATCT ATTTGCAATC AGGTGCGAAT GCGCTTGATA CCGCTAAGCG AGTGGATGAG GCGATGGAGA GATTATCGAA GTCTTTTCCT GAAAATATGG AGTATCGAAC ACCTTATGAT ACGACTAAAT TTATCCAAAT TTCAGTCAAT GAAGTCGTAA AAACGTTTGT GGAAGCGCTT TTGCTCGTTA TTGCGATTGT CTATCTTTTC TTGCAAAATA TGCGTGCAAC GATTATTCCT GTTTTGGCGA TTCCTGTTTC CATCATCGGA ACGTTTGCGG GAATGTATGC TTTAGGCTAT TCCATTAACC TTCTGACGCT CTTTGGGTTG GTTTTAGCCA TTGGTATTGT TGTGGATGAC GCGATTATCG TCATTGAAAA CGTGGAGCGG ATTTTACACT CTGAAAAAGA GATAAGTGTA AAAGAGGCTA CCATTAAGGC GATGCAAGAG GTTACAGGTC CTGTTGTGGC GATTGTGCTT GTTTTGTGTG CGGTCTTTAT TCCTGTATCG TTTATGGGTG GGTTTACGGG GCAAATGTAC CAACAATTCG CTATTACCAT TGTTATTTCC GTGATTATCT CAGGTATGGT CGCATTGACA TTAACTCCTG CTTTGTGTGC GATTTTTCTG AGCAAAAAAG AGCCAAAACC GTTTTGGTTT GTTAGAAAAT TTAATGAATT TTTTGATGCC TCAACCAACT GGTTCACGAG TGGTGTTAGT TTAGTGGTAC GTCATAGTGT GATTAGTGTG ATTGTTTTTG CAGTGCTGAT GGGAATGACC TATGGACTCT TTCAAAAAGT GCCAAGTTCT CTTGTGCCTA TGGAAGATAA AGGCTATTTG ATTGCGGTGA CAGCTCTGCC TCCTGCTTCT TCCTTGCACC GTACGCAAGC GGTCAGTGCG CAGGTGAGTG ACATTACCAA TCAAATGCCA GAAATTGCTT ATAACATCTC TATTTCAGGC TTTGACCTTT TAAGCGGTGC GGCAAAAACC AATGCGGCAA CCACCTTTTT ACCACTCAAA GATTGGAGTG AGCGAAAAGC CCCCAATCAG CACTCAGAAG CCATCAGTGG TGCGCTCAAT GGAGCCCTTT TTGGTGTCTC TGATGCGACC ATTTTTGCAC TCAACCCTCC ACCGATTATG GGGCTTAGTA TCTCAGGTGG TTTTGAGATG TACTTGCAAG ATAGAACAGG CGGTTCACTA GAGGCACTAG GTGATATCGC GGATCAAATC GTGGCAAAAG CGAATCAAAG ACCAGAACTT GCAAGGGTTA GAAATTCACT CAATATGAAA ATTCCTCAGT ATAAAGTGAA TTTGGATAGA GAAAAAGCCA AAGCTTTAGG CGTTTCGATT GATGATGCGT TTAAAACCAT GCAAGCAACC TTTGGTGCGT ACTATGTGAA TGACTTTAAC CTCTTTGGTA GAACCTATCA GGTCAATGTC CAATCTGAGG CTGATTTTAG AGAAAAACCT GAGGATTTAA AACATGTGTT TGTTAAATCC AGTACGGGTA AATTGATTCC TTTAAGTTCG TTAGTGAGTT ACGAGCGAAG TGTCGGTGGC GATGTGATTG AGCGTTTTAA CGTCTTTGCT GCAGCCAAAA TTGAGGGTGA ACCTAAACCT GGATATACCT CTGGTGATGC ACTCAAAGCC ATTGAAGAGG TAGTTAAGGA AGTAGCTCCT GAGGGATACG CAACTGCGTG GGCGGGAACG TCTTACCAAG AAAAAGCGAT GTCAGGCAGT GGAAGCCAAG CCTTCATTTT TGGTATCATT TTTATCTTCT TGATTTTAGC GGCGCAGTAT GAAAGGTGGC TCATGCCACT TGCCGTTGTA ACAGCGGTTC CGTTTGCGGT ATTTGGAGCG ATTATGGCGG TTTATTTACG AGGGTTAAGT AATGACATTT ACTTCCAAAT CGGGCTTTTG GTCTTGATTG GACTTTCAGC AAAAAATGCC ATCTTAATTG TTGAGTTTGC GATGCAAGCT CAAGAGAGAG GCAAGTCTAT TTTTGATGCG ACGCTTGAAG CGGCACGTCT TCGTTTCCGC CCGATTGTTA TGACCTCTTT AGCCTTTACC ATTGGTGTTT TACCACTGGC TTTAAGCTCA GGTGCAGGTG CAGGGAGTCG TCATGCGATT GGTACGGGTG TTATTGGAGG GATGATTGCC GCAACAACCA TTGCGATTTT CTTTATTCCC CTGTTTTACA ACGCTTTAGC TAGACTCAAT GCAAAATTTT CTAAAAAAGG AGAGCGTCAT GATGCGTAA
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Protein sequence | MFSKFFINRP IFATVLSIVV IIAGLMSIRA LPIEEYPEVT PPQVSVEATY AGASAETISK TVAAPLEQQI NGVEDMIYMS STASSTGSLS INVYFKIGTD PDQATINVNN RVQAALNKLP SEVQAQGVTV TKQSSTILKV ISIISPNNSY DEIYMANYAL INVIDELKRV EGVGNASLFG NQNYSMRVWM KPDQLAKYNL TPTDVINAIS EQNAQFATGR FNQSPSKTSQ AYTFTVTTQG RFDKVEEFEK IILKSNKDGS TLRLKDVARL ELGAESYDVT STLNGQTMVP IGIYLQSGAN ALDTAKRVDE AMERLSKSFP ENMEYRTPYD TTKFIQISVN EVVKTFVEAL LLVIAIVYLF LQNMRATIIP VLAIPVSIIG TFAGMYALGY SINLLTLFGL VLAIGIVVDD AIIVIENVER ILHSEKEISV KEATIKAMQE VTGPVVAIVL VLCAVFIPVS FMGGFTGQMY QQFAITIVIS VIISGMVALT LTPALCAIFL SKKEPKPFWF VRKFNEFFDA STNWFTSGVS LVVRHSVISV IVFAVLMGMT YGLFQKVPSS LVPMEDKGYL IAVTALPPAS SLHRTQAVSA QVSDITNQMP EIAYNISISG FDLLSGAAKT NAATTFLPLK DWSERKAPNQ HSEAISGALN GALFGVSDAT IFALNPPPIM GLSISGGFEM YLQDRTGGSL EALGDIADQI VAKANQRPEL ARVRNSLNMK IPQYKVNLDR EKAKALGVSI DDAFKTMQAT FGAYYVNDFN LFGRTYQVNV QSEADFREKP EDLKHVFVKS STGKLIPLSS LVSYERSVGG DVIERFNVFA AAKIEGEPKP GYTSGDALKA IEEVVKEVAP EGYATAWAGT SYQEKAMSGS GSQAFIFGII FIFLILAAQY ERWLMPLAVV TAVPFAVFGA IMAVYLRGLS NDIYFQIGLL VLIGLSAKNA ILIVEFAMQA QERGKSIFDA TLEAARLRFR PIVMTSLAFT IGVLPLALSS GAGAGSRHAI GTGVIGGMIA ATTIAIFFIP LFYNALARLN AKFSKKGERH DA
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