Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1105 |
Symbol | |
ID | 8592643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 1124172 |
End bp | 1125926 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_003304164 |
Protein GI | 268679733 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA GAATCGTAGT TGACCCAATT ACCAGAATTG AAGGACACTT AAGAGTTGAA GTCATTGTTG ATGATAACAA TGTAGTCACA GAAGCATATG CTTCTTCTAC CCTTTGGAGA GGTATTGAAA CAATCCTTAA GGGCAGAGAT CCAAGAGATG CAGGTTTTAT GGTTCAAAGA ATTTGTGGTG TTTGTACTTA TTCTCACTAT AAAGCAGGTA TTGCAGCAGT TGAAAATGCA TTAGGTATTG AGCCTCCATT GAATGCAAAA TTAACACGTA CATTGATGAA CTGTGCGCTT TTCTTGCATG ACCACGTGGT TCACTTTTAT CATCTTCATG GACTTGACTG GGTTGATGTT GTGTCTGCCC TTAAAGCTGA TCCACATAAA GCAGCGGCTG AAGCATTTAA ATATACTGAT GCACCTATTG CGTGTGGTGC AGATGATTTG GTTGTTGTTC AAAAAAGAGT AGCAGAGTTT GTTAAAAAAG GAAACCTTGG ACCATTTGCT AATGCATACT GGGGACACGC AACTTATAAA TTGACACCTG AGCAAAATTT AATTGCGGTA TCTCACTACT TAAAAGCACT TGAGATGCAA CGTGTTGCTG CTCAAATGAT GGCTATTTTT GGTGCAAAAC AACCGCATCC TCAAAGCTTA ACCGTGGGTG GTGTGACATG TATTATGGAT CTTCAAACAC CTTCACGTTT GGGTGAATAT ATGACAAAAT TCAAAGAGAT GGCAGAGTTT GTGAACCGTG CATACTATGC GGACGTTGTT ATGGCTGGAC TTGCGTATGC GAATGAACCA AGCGTCACAG GCGGTCTTGG CGTTCCAAAT CTTTGGACAC ATCAAGAGTT CCAAGTCAAT GCAAGTGAAT ATTTGTTTAA CAGTGGTTTG ATGATGGGTG AGGATGTTGT CAATCTCATT AGTGGAAAAC CATTTAAAGT TCAACAAATT GATGAGAGTA AAATTACCGA AGAAGCAACC CATGCATGGT ACAAAGACAA TGCTGCATAT CATCCTTATG AGGGTCGTCA AGAACCAAAT TACACAGGTC TTAAAGATGC TCAAACCATT AATGATAAAG GCGTGTTAGC ACCTACTAAA GTCGTGGATG AAAAAGGTAA ATATACATGG GTTAAAGCAC CACGTTATGA TGGCAAACCA CTTCAAGTAG GACCATTGGC AAATATCGTT GTGAACTATG CCCTTGGCAA CAAACGTGTC AAAACAGTTG TGGATAAATT CCTAAAAGAT ACAGGTCTTC CTATTTCAGC TGTCGCTTCA ACACTTGGAC GTACTGCATG TCGTATGTTG GAGACTAAAG TGGTTGCTGA TTATGGTTTA GAAGCATTTA CATCATTGAT TAATAACTTG AAAGTAGATG ATTCAACATG TGCGACATAC AAAATTGATA AAAACAAAGA GTATAAAGGT CGCTACATTG GTCACGTACC ACGTGGTACC CTCAGTCACT GGGTTAAAAT CAAAAATGGC GTCATTGAAA ATTACCAAGC AGTTGTTCCA ACCACATGGA ATGCAAGTCC AAAGGATGCA AAAGGGATAA GAGGTTCTTA TGAAGAATCA TTGATCGGTC TTAAAATTGC AGATCTTTCT CAGCCACTCG AAATTGTAAG ACTTGTTCAC TCTTATGACC CATGTCTTGC ATGTGCTGTA CATGTCATGG ATGCAAAAGG TAATGAGATG AGCAGTTATA AGGTGAATGT TAGCGGCTCA TCTTGTTCTT GCTAA
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Protein sequence | MSKRIVVDPI TRIEGHLRVE VIVDDNNVVT EAYASSTLWR GIETILKGRD PRDAGFMVQR ICGVCTYSHY KAGIAAVENA LGIEPPLNAK LTRTLMNCAL FLHDHVVHFY HLHGLDWVDV VSALKADPHK AAAEAFKYTD APIACGADDL VVVQKRVAEF VKKGNLGPFA NAYWGHATYK LTPEQNLIAV SHYLKALEMQ RVAAQMMAIF GAKQPHPQSL TVGGVTCIMD LQTPSRLGEY MTKFKEMAEF VNRAYYADVV MAGLAYANEP SVTGGLGVPN LWTHQEFQVN ASEYLFNSGL MMGEDVVNLI SGKPFKVQQI DESKITEEAT HAWYKDNAAY HPYEGRQEPN YTGLKDAQTI NDKGVLAPTK VVDEKGKYTW VKAPRYDGKP LQVGPLANIV VNYALGNKRV KTVVDKFLKD TGLPISAVAS TLGRTACRML ETKVVADYGL EAFTSLINNL KVDDSTCATY KIDKNKEYKG RYIGHVPRGT LSHWVKIKNG VIENYQAVVP TTWNASPKDA KGIRGSYEES LIGLKIADLS QPLEIVRLVH SYDPCLACAV HVMDAKGNEM SSYKVNVSGS SCSC
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