| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_1096 |
|---|
| Symbol | |
|---|
| ID | 8592634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | - |
|---|
| Start bp | 1115526 |
|---|
| End bp | 1116653 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | hydrogenase expression/formation protein HypD |
|---|
| Protein accession | YP_003304155 |
|---|
| Protein GI | 268679724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGAGG TAGATCTTAT CGAAGGGTTT CGTGATCCTA CACACATGCA AGCACTCGCT
GCTCTCATTA AAAAAGAGTG TCACTCAAAG ATTAACATTA TGGAGGTGTG CGGCGGACAT
ACGCATACCA TTATGAAATT TGGGCTTTCT CAGATTTTAC CAGAGCAGAT TGAATTTGTT
CATGGGCCAG GATGTCCTGT GTGCATTATG CCTAAAGAGC GCATTGACCA CGCTATTGCC
TTAGCATCCA TGCCCAATAC GATTTTAACC ACGCTTGGTG ATATGATACG TGTTCCTGGA
AGCCAAACCT CCTTACAAAA ATTGCGTGCG GAGGGAAAGG CTATCCGTTC TTTATACTCG
CCTTTGGATG CGCTTAAAAT TGCTCAGGAA AATCCGGATA AAAATGTGGT CTTTTTTGCG
ATTGGATTTG AAACAACAAC GCCTATGAGT GCTGTTTTGA TTCAACACGC CATAGCACTC
AATCTCAAAA ATCTCTTTTT CCATATCAAT CATGTCACCG TTCCTGAAGC TGTCGATGCG
ATTATGGGAG GAGGCGATGC GCATATTGAT GCTTTTTTGG GACCTTCTCA TGTTAGCGTG
ATTACGGGGT ATAAAATTTA TGAAACCATT GCATCAACTT ATCATACCCC TGTGGTCGTT
GCGGGATTTG AGCCGACTGA TGTAATGGAG TCTGTTTTGC GCGTTGTTCG TCAAATTAAC
GCGGGTAAAA GTGAGGTTGA AAATGAGTAC GCAAGGGCGG TTTCCAGAGA AGGTAATCTT
AAAGCGCAAG AACTCATTGA AACCTATTTT GAGAAACGAG AGCACTTTAG ATGGCGGGGT
ATTGGAGATA TTGCTAAGAG CGCTTTGAAA CTCAAAGCTG AGTATGCCAT GTATGATGCT
GAAGTGGTTT TTGATGACAT TCTTCCTAAA GTAGAATTAA ATGACCATAA ACTCTGTATT
TGTGGGGATA TTTTAAAAGG TAAGGCAAAA CCGTTTGATT GTAAAGTCTT TGGAAAAGCC
TGTACACCAA GCAATCCTAT GGGTTCTTGT ATGGTTTCAA GCGAGGGTGC GTGTGCGGCG
TATTTCAAAT ACGGTGCTTT TAATTTAAAA GGAGTCAAGC GTGACTAA
|
|---|
| Protein sequence | MCEVDLIEGF RDPTHMQALA ALIKKECHSK INIMEVCGGH THTIMKFGLS QILPEQIEFV
HGPGCPVCIM PKERIDHAIA LASMPNTILT TLGDMIRVPG SQTSLQKLRA EGKAIRSLYS
PLDALKIAQE NPDKNVVFFA IGFETTTPMS AVLIQHAIAL NLKNLFFHIN HVTVPEAVDA
IMGGGDAHID AFLGPSHVSV ITGYKIYETI ASTYHTPVVV AGFEPTDVME SVLRVVRQIN
AGKSEVENEY ARAVSREGNL KAQELIETYF EKREHFRWRG IGDIAKSALK LKAEYAMYDA
EVVFDDILPK VELNDHKLCI CGDILKGKAK PFDCKVFGKA CTPSNPMGSC MVSSEGACAA
YFKYGAFNLK GVKRD
|
|---|
| |