Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1087 |
Symbol | |
ID | 8592625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 1104972 |
End bp | 1106147 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | succinyl-CoA synthetase, beta subunit |
Protein accession | YP_003304146 |
Protein GI | 268679715 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000260623 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC ATGAGTATCA GTCCAAAGAG ATTTTTAGAC GTTATGGCGT TGCTACGCCA CGAGGGTATG TCGCAACAAG CGTTGAGGAA GCTGTCGAGA ATGCACACAA GTTAGGGGGT GCACTTTGGG TGGTTAAAGC ACAGATTCAC GCAGGTGGAC GTGGTTTAGC AGGAGGCGTT AAACTGGCTC GCAGTATCGA AGAAGTTGCT CGGTACACTC AATCACTGTT AGGAAAAAAT CTCGTTACCC ATCAAACAGG ACCTTTAGGA ACAGTGGTTC AAAAAGTCTA TATTGAAGAG GGAATGGATA TCGCTGATGA GTTTTATTTA GGTATTGTCT TAGATAGAGC ACAAGAAATG CCTGTCATTA TGGCCTCTCG TGAAGGTGGT ATGGAAATTG AGAAAATTGC CCATGAAACG CCTGAAAAAA TTATCAAAGT TACGATTGAC CCTTTTATTG GGTTTCAACC TTATCACGGA AGAGAACTGG CTTTTGGATT GTCTCTTGCT AAAGAGGAAA TGGCGGATTT TATAGCATTT GCGAAAGCCT TATATCAGGC ATATATGGAC AATGATGCCT CGATGATTGA GATTAATCCT TTGGTGAAAA CGAAACAGGG AAGATTTATA GCGCTTGATG GCAAAATGAG TTTTGATGAT AATGCGCTTT TCCGTCATCC TGAGATTGTT GCTATGCGTG ATTATAGTGA GGAAAATCCC ATCGAGAGGG AAGCTTCTGA GTATGGACTG AGTTATGTAA AACTCAATGG CAATGTAGGG TGTATGGTCA ATGGCGCAGG TCTTGCTATG GGCACCATGG ACATTATTGA TTATATGGGG GGAGAACCTG CAAATTTTTT AGATGTGGGT GGTGGAGCGA ATGCTTCGAC GGTTGCTAAA GGATTTGAAA TCATTTTAAA AGACCCCAAT GTAAAATCTA TTTTTGTCAA TATCTTTGGC GGAATTGTAC GGTGTGATCG CATTGCCAAT GGTATTTTAG AAGCGACAAA AATGGTGAAT GTGCATGTGC CTGTTATCGT TCGTTTAGAT GGAACCAATG CCAAAGAAGC GGTTGAAATT TTAAAAAATG CCAATATTAA AAATATTATC AGTGCCACAG ATTTGAGTGA TGGCGCTCAA AAAGCAGTTG CCGCCGCAAA AGGAGCGTTA GTATGA
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Protein sequence | MNIHEYQSKE IFRRYGVATP RGYVATSVEE AVENAHKLGG ALWVVKAQIH AGGRGLAGGV KLARSIEEVA RYTQSLLGKN LVTHQTGPLG TVVQKVYIEE GMDIADEFYL GIVLDRAQEM PVIMASREGG MEIEKIAHET PEKIIKVTID PFIGFQPYHG RELAFGLSLA KEEMADFIAF AKALYQAYMD NDASMIEINP LVKTKQGRFI ALDGKMSFDD NALFRHPEIV AMRDYSEENP IEREASEYGL SYVKLNGNVG CMVNGAGLAM GTMDIIDYMG GEPANFLDVG GGANASTVAK GFEIILKDPN VKSIFVNIFG GIVRCDRIAN GILEATKMVN VHVPVIVRLD GTNAKEAVEI LKNANIKNII SATDLSDGAQ KAVAAAKGAL V
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