Gene Sdel_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_1087 
Symbol 
ID8592625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp1104972 
End bp1106147 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content41% 
IMG OID 
Productsuccinyl-CoA synthetase, beta subunit 
Protein accessionYP_003304146 
Protein GI268679715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000260623 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTC ATGAGTATCA GTCCAAAGAG ATTTTTAGAC GTTATGGCGT TGCTACGCCA 
CGAGGGTATG TCGCAACAAG CGTTGAGGAA GCTGTCGAGA ATGCACACAA GTTAGGGGGT
GCACTTTGGG TGGTTAAAGC ACAGATTCAC GCAGGTGGAC GTGGTTTAGC AGGAGGCGTT
AAACTGGCTC GCAGTATCGA AGAAGTTGCT CGGTACACTC AATCACTGTT AGGAAAAAAT
CTCGTTACCC ATCAAACAGG ACCTTTAGGA ACAGTGGTTC AAAAAGTCTA TATTGAAGAG
GGAATGGATA TCGCTGATGA GTTTTATTTA GGTATTGTCT TAGATAGAGC ACAAGAAATG
CCTGTCATTA TGGCCTCTCG TGAAGGTGGT ATGGAAATTG AGAAAATTGC CCATGAAACG
CCTGAAAAAA TTATCAAAGT TACGATTGAC CCTTTTATTG GGTTTCAACC TTATCACGGA
AGAGAACTGG CTTTTGGATT GTCTCTTGCT AAAGAGGAAA TGGCGGATTT TATAGCATTT
GCGAAAGCCT TATATCAGGC ATATATGGAC AATGATGCCT CGATGATTGA GATTAATCCT
TTGGTGAAAA CGAAACAGGG AAGATTTATA GCGCTTGATG GCAAAATGAG TTTTGATGAT
AATGCGCTTT TCCGTCATCC TGAGATTGTT GCTATGCGTG ATTATAGTGA GGAAAATCCC
ATCGAGAGGG AAGCTTCTGA GTATGGACTG AGTTATGTAA AACTCAATGG CAATGTAGGG
TGTATGGTCA ATGGCGCAGG TCTTGCTATG GGCACCATGG ACATTATTGA TTATATGGGG
GGAGAACCTG CAAATTTTTT AGATGTGGGT GGTGGAGCGA ATGCTTCGAC GGTTGCTAAA
GGATTTGAAA TCATTTTAAA AGACCCCAAT GTAAAATCTA TTTTTGTCAA TATCTTTGGC
GGAATTGTAC GGTGTGATCG CATTGCCAAT GGTATTTTAG AAGCGACAAA AATGGTGAAT
GTGCATGTGC CTGTTATCGT TCGTTTAGAT GGAACCAATG CCAAAGAAGC GGTTGAAATT
TTAAAAAATG CCAATATTAA AAATATTATC AGTGCCACAG ATTTGAGTGA TGGCGCTCAA
AAAGCAGTTG CCGCCGCAAA AGGAGCGTTA GTATGA
 
Protein sequence
MNIHEYQSKE IFRRYGVATP RGYVATSVEE AVENAHKLGG ALWVVKAQIH AGGRGLAGGV 
KLARSIEEVA RYTQSLLGKN LVTHQTGPLG TVVQKVYIEE GMDIADEFYL GIVLDRAQEM
PVIMASREGG MEIEKIAHET PEKIIKVTID PFIGFQPYHG RELAFGLSLA KEEMADFIAF
AKALYQAYMD NDASMIEINP LVKTKQGRFI ALDGKMSFDD NALFRHPEIV AMRDYSEENP
IEREASEYGL SYVKLNGNVG CMVNGAGLAM GTMDIIDYMG GEPANFLDVG GGANASTVAK
GFEIILKDPN VKSIFVNIFG GIVRCDRIAN GILEATKMVN VHVPVIVRLD GTNAKEAVEI
LKNANIKNII SATDLSDGAQ KAVAAAKGAL V