Gene Sdel_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_1039 
Symbol 
ID8592577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp1057367 
End bp1059118 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content34% 
IMG OID 
Producttype II secretion system protein E 
Protein accessionYP_003304099 
Protein GI268679668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA TTGCAACTCC GTTACTAACC TATCTTATTC ATAATCGTAT TATTGATGAA 
AATACAGCAT CAAAAATCAA AGAAGAGCTT AAAGAGAATC AACATAAAGT TCTTGGTGAA
ATTTTAGTTG AAAATAACTT TTTTACCAAA GAAGATTTGC TTATTTTAGT GATTGAATTT
TTTAAAAAAG GATATTTAAC ACTAGAAGAT GTGAATACGC ATTTTGCAAT TGAAAGTGAA
AAATTTTTAA AGTCTTTAGC CAAGCATTTA AATTATGAAT ATTTAGATTT AGATTCGATT
GACATTGATT ATCGCCTAGC ATCTAAACTT CCCTTTATGC AACTAAAAAA ATTCAAAGCC
CTTCCTATTC GAGAAGATGA GATCAATATT TTTATTGCAC TCAAAGATCC TTTGGATATT
AATGCGCAAG AAGGTGTCCA AAGAATTTTC CCACGAAAGC TTTTAAAAGT TATTATTGCA
GATCCCACAC AAATTGATAA ATATCTTGTT AAAATGGAAC TTGGAGAGAG TATTAAAGGC
TTAATTGGTG AAATTCGCAA AGAGATTACA TCCAGTGCAG CTGAAAATCC TCAGGAATCT
TCAGGTATTT TAAAACTCAT TGAAATTATT TTAAAAACAT CCATTTTAGC AAGAGCAAGT
GATATTCATA TTGAACCAAC AGAAAATAAC TGTATTGTGC GCAGTCGTAT TGATGGTATG
CTGACTGAAA CCTTTATTTT TGATAAAGAT ATTTACCCGC CCCTTGGTTC ACGTATGAAA
CTTCTCTCAA ATATGGATAT TGCAGAAAAA AGAAAACCTC AAGATGGGCG TTTTTCAGCA
ACGATTTTGG GAAAAGAGTA TGACTTTAGG ATTTCTGCGC TTCCAACTAT AAATGGTGAA
TCAATTGTTA TTCGTATTTT AGATAAATCC AAAGTAATGA TTAAAATTGA AGATTTGGGT
ATGCATCCTA ACAATTATGT GAAATTTGAA CAGGCTATGC ACGCACCTTA TGGTATTATA
TTGGTTACTG GTCCTACAGG TAGTGGTAAA ACTACAACAC TTTATGCCGC ACTCAATGCG
ATTAAAAGTG TTCAAACAAA AATTATCACG GTTGAAGACC CTGTGGAGTA TCAACTTACA
TTGACACAAC AAGTGCAAGT GAATGAAAAA GCAAATCTTA CTTTTTCATC TGCGTTACGT
TCCATCTTAA GACAAGATCC TGATGTTATT ATGATTGGTG AGATTCGTGA TACAGAAACT
CTTCGTATTG CAGTACAAGC TGCCCTTACA GGTCACTTAG TTTTTTCAAC ACTCCATACC
AATGATGCGA TCAGTGCGGT GACAAGGGTT GTAGATATGG GAATTGAACC TTATTTAATG
AGTGGTTCAC TTGTTGCGAT TGAAGCGCAA AGGCTTGTAC GAAAACTTTG TCCTCACTGC
AAAACAAAAT ACACATTACC CAAAACAGCC TACGATGAAA TCAAAGATAT GTTGCCAGAT
AATTATCAAT TTTATAAAAA TGTTGGGTGC GAAAAATGTT CTCAAACAGG CTATCTTGGA
AGGGAAATGA TTTCTGAAAT TTTAACAATC AGTGAAACCA TTTCGAGTAT GATAGCACAG
GGTGCTGGAA AAAGTGAAAT TAAAGAGCAG GCTCTTAAAG AAGGGTTTGT CGATATGTAT
CAAGATGGTA TTACACGAGC AGCCAATGGT GTCACAACAC TAGATGAAAT TGCAAGGGTG
GCAAAAGGAT GA
 
Protein sequence
MSDIATPLLT YLIHNRIIDE NTASKIKEEL KENQHKVLGE ILVENNFFTK EDLLILVIEF 
FKKGYLTLED VNTHFAIESE KFLKSLAKHL NYEYLDLDSI DIDYRLASKL PFMQLKKFKA
LPIREDEINI FIALKDPLDI NAQEGVQRIF PRKLLKVIIA DPTQIDKYLV KMELGESIKG
LIGEIRKEIT SSAAENPQES SGILKLIEII LKTSILARAS DIHIEPTENN CIVRSRIDGM
LTETFIFDKD IYPPLGSRMK LLSNMDIAEK RKPQDGRFSA TILGKEYDFR ISALPTINGE
SIVIRILDKS KVMIKIEDLG MHPNNYVKFE QAMHAPYGII LVTGPTGSGK TTTLYAALNA
IKSVQTKIIT VEDPVEYQLT LTQQVQVNEK ANLTFSSALR SILRQDPDVI MIGEIRDTET
LRIAVQAALT GHLVFSTLHT NDAISAVTRV VDMGIEPYLM SGSLVAIEAQ RLVRKLCPHC
KTKYTLPKTA YDEIKDMLPD NYQFYKNVGC EKCSQTGYLG REMISEILTI SETISSMIAQ
GAGKSEIKEQ ALKEGFVDMY QDGITRAANG VTTLDEIARV AKG