Gene Sdel_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_1000 
Symbol 
ID8592537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp1020909 
End bp1023443 
Gene Length2535 bp 
Protein Length844 aa 
Translation table11 
GC content40% 
IMG OID 
ProductHemolysin-type calcium-binding region 
Protein accessionYP_003304064 
Protein GI268679633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.862975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGAG AAAAAAAAGA AAAAAGTAGG ATAAAAAGTA GCCTGTCCCC TTTTTTTGCC 
ACTTCCCTCG CCAATCAAGC AAAAACAGAC ACGGCCACCC TCTACGCCCT CGTTCACTTA
AACCCATTTG CCATCCAAGG AAACCTAGAA GCCTACAATA CCATCAACCC TGATGACTAC
TCTGGCATGT ACCTCAAAGA TCGAAGTGAT ATGCTTTATT ACACAATCCA CTCTGATAAG
TATGATACAA CTGATGTATC TACCTATTAT GAAGATAAAA CTTTAGGTGT TGTACTAGAA
AAATACAATG CCTCTTTGGA TAAAGTCATT TTTGGTTCAG ATACAAAAGA TTCTATTCTG
TCAGCTTTAA ATGACGATGA TGATGGCAGT GGAGATGATC ATCTCTATGG TATGGGTGGT
AATGATGATC TCTATGGATT TAAGGGGAAT GATTATTTAG AAGGTGGAAA AGGTAACGAT
AGACTCTTTG GTGCTGAAGG TAATGACACC TACTTCTATC AAAAAGGTGA TGGAAAAGAT
ACGATAGATG AGAGTGGGCA ACAGTATTTA TTTTCTTCAA GACAAAATGA TCCATCCGAT
AAACTCCTCT TTGGCAAAGG TATCACACAA GAAGACCTAA TCGTCACAGT AAGTGGCAAT
GACCTTATCG TTAGTTTTAA AAACAGTACG AATGATGGTA TCACTCTTAA AAACTGGTAT
ACCAAGGAAA ACAGAATTGA ATACTTTGAA TTTAGCAATG GAACTCGTTT GGATGAAAAT
GGCATCATTA AACTCATGGC AACCGATGAA GTAGACTACG TTAAAGGAAC TGAGAATGAA
AATACTATCA CTGGAGGAGG AAGTGCCGAC CGTTTAGAAG GAGGCGATAA CTACGATACC
TACCTAGCAG GTAAGGGTGA TACTATCAGT GATAGTGATG GAAAAGGACG TGTCAGTTTT
GAAGGAAATA TGCTCGGCGG TGGAGTGTTT AATAAAAACA CTGGAGCCTA TGAAGGTGAT
GGCGGAAGTT ATAACTTAAG TGGAGGTGTT CTAACCTTTA CCAATGGAGC AGGTACGATC
ACTATAGAAA ACTATTCCAA ATCTGATAAC TCCTTAGGCA TTCATTTGGA AGATAAAGAT
GATGATGACA TTCTCCCAGA AACCTCGGCA GGGGAAGGAC ATAACGAGAA CTTTTCCTCC
CCACTCGTGC TAGATCTAAA TGGAAATGGA ACCACTTCTA CCTTTATTGA AAAGACGCAA
ACCTACTTTG ATATGAATGG TGATGGTTTT AAAGAGCGAA CATCATGGAG TGAAAGTAGT
GATGGCCTCT TAACCCTAGA TTTAAACAAT GATGGTGTTG TTACTAACGG AGCTGAACTT
TTTGGAAATA ACACGAAACT AGCAAATGGT ACCTTAGCTA AAGATGGCTT TGCAGCCCTA
AGCCAATACG ATCTAAATCA TGATAATATC ATAGATACCA AAGATAGCAT TTACGCGCAT
CTTAAAGTCT GGATGGACAC CAACAGCGAT GGTATCAGTA CCTCAGATGA ACTTAAAACA
CTTCAAGAAC TAAACATCAC TTCTATTAAC CTCAATGCAA AAGAGACTTC CACTTCAGAA
GCTTACAATA CCATCAGTGA GACTTCCACT TTTACTCAAA ATGGACAAAC AAAAACTATC
AATGATGTAT GGTTCTACCA AAACAAATCC GATACCACCT ATGACTACAC CACACCCATC
AAAGAAAGCG TTGCGGCACT TCCAACCATC GAAGGCAGTG GCAGAGTCAA AGACCTAAGA
GATGCTATGA ATGATGACAC TGTTCTAGAA GCCAAAGTCA CCAACCTTCT TACCAATGCC
TCTTCCATGA GTTTTTCAAA TTTTAGTAGT GCGTTTAAAG ATATGGTAGC ACGTTGGAGT
GGAGCTGATA CCATCAGTGC CACTGCCACT AGAGGGACAC AGTCTATCTT AAACCATAAC
TATGCGAATG CTTCTGCCAT TTATGTCAAA GAAGTCTATG CCTATGCCAG AGATGTTGCC
ATCTTAGAAG CCTTTGCAGG AAAAAGCTTT AGTATGGTTG CCGATGGTGT AACAACAACC
GATGTCATAG GAACTGAAGC CAGTGTGGCG ATGAATGAAG CTTACAAAGA GCTTCAATAC
TCCCAAATGA TAGCCTTCCT CAGTGATGCC CTGTACGGTG AATCTTTAAG TAAAGATGAA
CTCATCACCA ATCTTCAAAC CACACTTACC ACTACACCGA GTGACACACT TTCCACCTTA
CTGCTCTCCA CCATGGTCTA TCGTTATGGG TTAGATACTT TAGAGGGTTT TAATGACACA
CTACTTTCAA ATACAACCTT TAAAACAGCG CTTGGTACCA ATGGCATTAG TTATAGCATC
AACGCTTTGG GGGAAGTGGT GGGGAACTTT TACCTTTTTA CATGTAAACA TTTTACAACA
CTAAAATCTT TACATGTAAG AAATCAAATT CAACACAAAG GGGCAAATGA TGGGGCAGAA
ATCATGGTGG CGTGA
 
Protein sequence
MLREKKEKSR IKSSLSPFFA TSLANQAKTD TATLYALVHL NPFAIQGNLE AYNTINPDDY 
SGMYLKDRSD MLYYTIHSDK YDTTDVSTYY EDKTLGVVLE KYNASLDKVI FGSDTKDSIL
SALNDDDDGS GDDHLYGMGG NDDLYGFKGN DYLEGGKGND RLFGAEGNDT YFYQKGDGKD
TIDESGQQYL FSSRQNDPSD KLLFGKGITQ EDLIVTVSGN DLIVSFKNST NDGITLKNWY
TKENRIEYFE FSNGTRLDEN GIIKLMATDE VDYVKGTENE NTITGGGSAD RLEGGDNYDT
YLAGKGDTIS DSDGKGRVSF EGNMLGGGVF NKNTGAYEGD GGSYNLSGGV LTFTNGAGTI
TIENYSKSDN SLGIHLEDKD DDDILPETSA GEGHNENFSS PLVLDLNGNG TTSTFIEKTQ
TYFDMNGDGF KERTSWSESS DGLLTLDLNN DGVVTNGAEL FGNNTKLANG TLAKDGFAAL
SQYDLNHDNI IDTKDSIYAH LKVWMDTNSD GISTSDELKT LQELNITSIN LNAKETSTSE
AYNTISETST FTQNGQTKTI NDVWFYQNKS DTTYDYTTPI KESVAALPTI EGSGRVKDLR
DAMNDDTVLE AKVTNLLTNA SSMSFSNFSS AFKDMVARWS GADTISATAT RGTQSILNHN
YANASAIYVK EVYAYARDVA ILEAFAGKSF SMVADGVTTT DVIGTEASVA MNEAYKELQY
SQMIAFLSDA LYGESLSKDE LITNLQTTLT TTPSDTLSTL LLSTMVYRYG LDTLEGFNDT
LLSNTTFKTA LGTNGISYSI NALGEVVGNF YLFTCKHFTT LKSLHVRNQI QHKGANDGAE
IMVA